data_4H0N # _model_server_result.job_id B3xriPFtG3giSlqeh2o7UQ _model_server_result.datetime_utc '2025-07-04 20:42:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":402}' # _entry.id 4H0N # _exptl.entry_id 4H0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H0N _cell.length_a 97.394 _cell.length_b 106.154 _cell.length_c 151.016 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 104 A GLY 103 1_555 F CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc2 A OD1 ASP 107 A ASP 106 1_555 F CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc3 A OD2 ASP 107 A ASP 106 1_555 F CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc4 B O GLY 104 B GLY 103 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.942 ? metalc ? metalc5 C O GLY 104 C GLY 103 1_555 J CA CA . C CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.033 ? metalc ? metalc6 C OD1 ASP 107 C ASP 106 1_555 J CA CA . C CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? metalc ? metalc7 D O GLY 104 D GLY 103 1_555 L CA CA . D CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc8 D OD1 ASP 107 D ASP 106 1_555 L CA CA . D CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4H0N _atom_sites.fract_transf_matrix[1][1] 0.010268 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SAH A 1 401 392 SAH SAH . F 3 CA A 1 402 393 CA CA . G 2 SAH B 1 401 392 SAH SAH . H 3 CA B 1 402 393 CA CA . I 2 SAH C 1 401 392 SAH SAH . J 3 CA C 1 402 393 CA CA . K 2 SAH D 1 401 392 SAH SAH . L 3 CA D 1 402 393 CA CA . M 4 HOH A 1 501 6 HOH HOH . M 4 HOH A 2 502 9 HOH HOH . M 4 HOH A 3 503 14 HOH HOH . M 4 HOH A 4 504 15 HOH HOH . M 4 HOH A 5 505 18 HOH HOH . M 4 HOH A 6 506 19 HOH HOH . M 4 HOH A 7 507 28 HOH HOH . M 4 HOH A 8 508 32 HOH HOH . M 4 HOH A 9 509 34 HOH HOH . M 4 HOH A 10 510 41 HOH HOH . M 4 HOH A 11 511 47 HOH HOH . M 4 HOH A 12 512 50 HOH HOH . M 4 HOH A 13 513 54 HOH HOH . M 4 HOH A 14 514 67 HOH HOH . M 4 HOH A 15 515 78 HOH HOH . M 4 HOH A 16 516 80 HOH HOH . M 4 HOH A 17 517 81 HOH HOH . M 4 HOH A 18 518 84 HOH HOH . M 4 HOH A 19 519 89 HOH HOH . M 4 HOH A 20 520 90 HOH HOH . M 4 HOH A 21 521 92 HOH HOH . M 4 HOH A 22 522 93 HOH HOH . M 4 HOH A 23 523 94 HOH HOH . M 4 HOH A 24 524 98 HOH HOH . M 4 HOH A 25 525 100 HOH HOH . M 4 HOH A 26 526 101 HOH HOH . M 4 HOH A 27 527 108 HOH HOH . M 4 HOH A 28 528 119 HOH HOH . M 4 HOH A 29 529 120 HOH HOH . M 4 HOH A 30 530 121 HOH HOH . M 4 HOH A 31 531 122 HOH HOH . M 4 HOH A 32 532 123 HOH HOH . M 4 HOH A 33 533 125 HOH HOH . M 4 HOH A 34 534 126 HOH HOH . M 4 HOH A 35 535 129 HOH HOH . M 4 HOH A 36 536 131 HOH HOH . M 4 HOH A 37 537 136 HOH HOH . M 4 HOH A 38 538 139 HOH HOH . M 4 HOH A 39 539 150 HOH HOH . M 4 HOH A 40 540 153 HOH HOH . M 4 HOH A 41 541 157 HOH HOH . M 4 HOH A 42 542 159 HOH HOH . M 4 HOH A 43 543 161 HOH HOH . M 4 HOH A 44 544 166 HOH HOH . M 4 HOH A 45 545 169 HOH HOH . M 4 HOH A 46 546 171 HOH HOH . M 4 HOH A 47 547 173 HOH HOH . M 4 HOH A 48 548 175 HOH HOH . M 4 HOH A 49 549 179 HOH HOH . M 4 HOH A 50 550 183 HOH HOH . M 4 HOH A 51 551 188 HOH HOH . M 4 HOH A 52 552 189 HOH HOH . N 4 HOH B 1 501 2 HOH HOH . N 4 HOH B 2 502 4 HOH HOH . N 4 HOH B 3 503 7 HOH HOH . N 4 HOH B 4 504 11 HOH HOH . N 4 HOH B 5 505 13 HOH HOH . N 4 HOH B 6 506 16 HOH HOH . N 4 HOH B 7 507 20 HOH HOH . N 4 HOH B 8 508 22 HOH HOH . N 4 HOH B 9 509 30 HOH HOH . N 4 HOH B 10 510 31 HOH HOH . N 4 HOH B 11 511 33 HOH HOH . N 4 HOH B 12 512 35 HOH HOH . N 4 HOH B 13 513 37 HOH HOH . N 4 HOH B 14 514 38 HOH HOH . N 4 HOH B 15 515 40 HOH HOH . N 4 HOH B 16 516 42 HOH HOH . N 4 HOH B 17 517 43 HOH HOH . N 4 HOH B 18 518 44 HOH HOH . N 4 HOH B 19 519 51 HOH HOH . N 4 HOH B 20 520 52 HOH HOH . N 4 HOH B 21 521 53 HOH HOH . N 4 HOH B 22 522 61 HOH HOH . N 4 HOH B 23 523 71 HOH HOH . N 4 HOH B 24 524 72 HOH HOH . N 4 HOH B 25 525 76 HOH HOH . N 4 HOH B 26 526 87 HOH HOH . N 4 HOH B 27 527 95 HOH HOH . N 4 HOH B 28 528 96 HOH HOH . N 4 HOH B 29 529 104 HOH HOH . N 4 HOH B 30 530 105 HOH HOH . N 4 HOH B 31 531 110 HOH HOH . N 4 HOH B 32 532 112 HOH HOH . N 4 HOH B 33 533 113 HOH HOH . N 4 HOH B 34 534 116 HOH HOH . N 4 HOH B 35 535 124 HOH HOH . N 4 HOH B 36 536 127 HOH HOH . N 4 HOH B 37 537 134 HOH HOH . N 4 HOH B 38 538 135 HOH HOH . N 4 HOH B 39 539 140 HOH HOH . N 4 HOH B 40 540 142 HOH HOH . N 4 HOH B 41 541 143 HOH HOH . N 4 HOH B 42 542 144 HOH HOH . N 4 HOH B 43 543 145 HOH HOH . N 4 HOH B 44 544 149 HOH HOH . N 4 HOH B 45 545 152 HOH HOH . N 4 HOH B 46 546 162 HOH HOH . N 4 HOH B 47 547 165 HOH HOH . N 4 HOH B 48 548 167 HOH HOH . N 4 HOH B 49 549 170 HOH HOH . N 4 HOH B 50 550 177 HOH HOH . N 4 HOH B 51 551 180 HOH HOH . N 4 HOH B 52 552 187 HOH HOH . N 4 HOH B 53 553 190 HOH HOH . N 4 HOH B 54 554 191 HOH HOH . N 4 HOH B 55 555 192 HOH HOH . O 4 HOH C 1 501 1 HOH HOH . O 4 HOH C 2 502 21 HOH HOH . O 4 HOH C 3 503 23 HOH HOH . O 4 HOH C 4 504 24 HOH HOH . O 4 HOH C 5 505 26 HOH HOH . O 4 HOH C 6 506 36 HOH HOH . O 4 HOH C 7 507 39 HOH HOH . O 4 HOH C 8 508 49 HOH HOH . O 4 HOH C 9 509 55 HOH HOH . O 4 HOH C 10 510 56 HOH HOH . O 4 HOH C 11 511 58 HOH HOH . O 4 HOH C 12 512 59 HOH HOH . O 4 HOH C 13 513 64 HOH HOH . O 4 HOH C 14 514 66 HOH HOH . O 4 HOH C 15 515 69 HOH HOH . O 4 HOH C 16 516 70 HOH HOH . O 4 HOH C 17 517 73 HOH HOH . O 4 HOH C 18 518 75 HOH HOH . O 4 HOH C 19 519 97 HOH HOH . O 4 HOH C 20 520 103 HOH HOH . O 4 HOH C 21 521 106 HOH HOH . O 4 HOH C 22 522 109 HOH HOH . O 4 HOH C 23 523 117 HOH HOH . O 4 HOH C 24 524 128 HOH HOH . O 4 HOH C 25 525 132 HOH HOH . O 4 HOH C 26 526 141 HOH HOH . O 4 HOH C 27 527 148 HOH HOH . O 4 HOH C 28 528 156 HOH HOH . O 4 HOH C 29 529 158 HOH HOH . O 4 HOH C 30 530 181 HOH HOH . O 4 HOH C 31 531 182 HOH HOH . O 4 HOH C 32 532 184 HOH HOH . O 4 HOH C 33 533 185 HOH HOH . O 4 HOH C 34 534 186 HOH HOH . P 4 HOH D 1 501 3 HOH HOH . P 4 HOH D 2 502 5 HOH HOH . P 4 HOH D 3 503 8 HOH HOH . P 4 HOH D 4 504 10 HOH HOH . P 4 HOH D 5 505 12 HOH HOH . P 4 HOH D 6 506 17 HOH HOH . P 4 HOH D 7 507 25 HOH HOH . P 4 HOH D 8 508 27 HOH HOH . P 4 HOH D 9 509 29 HOH HOH . P 4 HOH D 10 510 45 HOH HOH . P 4 HOH D 11 511 46 HOH HOH . P 4 HOH D 12 512 48 HOH HOH . P 4 HOH D 13 513 57 HOH HOH . P 4 HOH D 14 514 60 HOH HOH . P 4 HOH D 15 515 62 HOH HOH . P 4 HOH D 16 516 63 HOH HOH . P 4 HOH D 17 517 65 HOH HOH . P 4 HOH D 18 518 68 HOH HOH . P 4 HOH D 19 519 74 HOH HOH . P 4 HOH D 20 520 77 HOH HOH . P 4 HOH D 21 521 79 HOH HOH . P 4 HOH D 22 522 82 HOH HOH . P 4 HOH D 23 523 83 HOH HOH . P 4 HOH D 24 524 85 HOH HOH . P 4 HOH D 25 525 86 HOH HOH . P 4 HOH D 26 526 88 HOH HOH . P 4 HOH D 27 527 91 HOH HOH . P 4 HOH D 28 528 99 HOH HOH . P 4 HOH D 29 529 102 HOH HOH . P 4 HOH D 30 530 107 HOH HOH . P 4 HOH D 31 531 111 HOH HOH . P 4 HOH D 32 532 114 HOH HOH . P 4 HOH D 33 533 115 HOH HOH . P 4 HOH D 34 534 118 HOH HOH . P 4 HOH D 35 535 130 HOH HOH . P 4 HOH D 36 536 133 HOH HOH . P 4 HOH D 37 537 137 HOH HOH . P 4 HOH D 38 538 138 HOH HOH . P 4 HOH D 39 539 146 HOH HOH . P 4 HOH D 40 540 147 HOH HOH . P 4 HOH D 41 541 151 HOH HOH . P 4 HOH D 42 542 154 HOH HOH . P 4 HOH D 43 543 155 HOH HOH . P 4 HOH D 44 544 160 HOH HOH . P 4 HOH D 45 545 163 HOH HOH . P 4 HOH D 46 546 164 HOH HOH . P 4 HOH D 47 547 168 HOH HOH . P 4 HOH D 48 548 172 HOH HOH . P 4 HOH D 49 549 174 HOH HOH . P 4 HOH D 50 550 176 HOH HOH . P 4 HOH D 51 551 178 HOH HOH . P 4 HOH D 52 552 193 HOH HOH . P 4 HOH D 53 553 194 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 172.117 _atom_site.Cartn_y 89.183 _atom_site.Cartn_z 224.983 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #