data_4H0T # _model_server_result.job_id 2S3lBTkf5cqTBEaI2HrZDw _model_server_result.datetime_utc '2024-11-15 18:34:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":410}' # _entry.id 4H0T # _exptl.entry_id 4H0T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H0T _cell.length_a 54.016 _cell.length_b 134.169 _cell.length_c 151.028 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id NH1 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 177 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 177 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id M _struct_conn.ptnr2_label_atom_id C1D _struct_conn.ptnr2_label_comp_id AR6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id AR6 _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.487 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 194 n n C1 C2 EDO sing 195 n n C1 H11 EDO sing 196 n n C1 H12 EDO sing 197 n n O1 HO1 EDO sing 198 n n C2 O2 EDO sing 199 n n C2 H21 EDO sing 200 n n C2 H22 EDO sing 201 n n O2 HO2 EDO sing 202 n n # _atom_sites.entry_id 4H0T _atom_sites.fract_transf_matrix[1][1] 0.018513 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 501 600 PO4 PO4 . D 4 EDO A 1 502 2 EDO EDO . E 4 EDO A 1 503 3 EDO EDO . F 4 EDO A 1 504 4 EDO EDO . G 4 EDO A 1 505 8 EDO EDO . H 4 EDO A 1 506 11 EDO EDO . I 4 EDO A 1 507 18 EDO EDO . J 4 EDO A 1 508 19 EDO EDO . K 4 EDO A 1 509 38 EDO EDO . L 4 EDO A 1 510 39 EDO EDO . M 5 AR6 B 1 401 3 AR6 AMP . N 6 CA B 1 402 400 CA CA . O 7 LAR B 1 403 500 LAR LAR . P 8 ATP B 1 404 600 ATP ATP . Q 4 EDO B 1 405 12 EDO EDO . R 4 EDO B 1 406 15 EDO EDO . S 4 EDO B 1 407 16 EDO EDO . T 4 EDO B 1 408 17 EDO EDO . U 4 EDO B 1 409 25 EDO EDO . V 4 EDO B 1 410 29 EDO EDO . W 4 EDO B 1 411 35 EDO EDO . X 4 EDO B 1 412 42 EDO EDO . Y 4 EDO B 1 413 48 EDO EDO . Z 9 HOH A 1 601 46 HOH HOH . Z 9 HOH A 2 602 47 HOH HOH . Z 9 HOH A 3 603 48 HOH HOH . Z 9 HOH A 4 604 49 HOH HOH . Z 9 HOH A 5 605 50 HOH HOH . Z 9 HOH A 6 606 51 HOH HOH . Z 9 HOH A 7 607 52 HOH HOH . Z 9 HOH A 8 608 55 HOH HOH . Z 9 HOH A 9 609 56 HOH HOH . Z 9 HOH A 10 610 57 HOH HOH . Z 9 HOH A 11 611 58 HOH HOH . Z 9 HOH A 12 612 59 HOH HOH . Z 9 HOH A 13 613 60 HOH HOH . Z 9 HOH A 14 614 61 HOH HOH . Z 9 HOH A 15 615 62 HOH HOH . Z 9 HOH A 16 616 63 HOH HOH . Z 9 HOH A 17 617 64 HOH HOH . Z 9 HOH A 18 618 65 HOH HOH . Z 9 HOH A 19 619 66 HOH HOH . Z 9 HOH A 20 620 68 HOH HOH . Z 9 HOH A 21 621 69 HOH HOH . Z 9 HOH A 22 622 70 HOH HOH . Z 9 HOH A 23 623 71 HOH HOH . Z 9 HOH A 24 624 72 HOH HOH . Z 9 HOH A 25 625 73 HOH HOH . Z 9 HOH A 26 626 75 HOH HOH . Z 9 HOH A 27 627 76 HOH HOH . Z 9 HOH A 28 628 77 HOH HOH . Z 9 HOH A 29 629 79 HOH HOH . Z 9 HOH A 30 630 80 HOH HOH . Z 9 HOH A 31 631 81 HOH HOH . Z 9 HOH A 32 632 82 HOH HOH . Z 9 HOH A 33 633 83 HOH HOH . Z 9 HOH A 34 634 84 HOH HOH . Z 9 HOH A 35 635 85 HOH HOH . Z 9 HOH A 36 636 86 HOH HOH . Z 9 HOH A 37 637 87 HOH HOH . Z 9 HOH A 38 638 88 HOH HOH . Z 9 HOH A 39 639 89 HOH HOH . Z 9 HOH A 40 640 90 HOH HOH . Z 9 HOH A 41 641 91 HOH HOH . Z 9 HOH A 42 642 92 HOH HOH . Z 9 HOH A 43 643 95 HOH HOH . Z 9 HOH A 44 644 96 HOH HOH . Z 9 HOH A 45 645 97 HOH HOH . Z 9 HOH A 46 646 98 HOH HOH . Z 9 HOH A 47 647 99 HOH HOH . Z 9 HOH A 48 648 100 HOH HOH . Z 9 HOH A 49 649 102 HOH HOH . Z 9 HOH A 50 650 104 HOH HOH . Z 9 HOH A 51 651 105 HOH HOH . Z 9 HOH A 52 652 107 HOH HOH . Z 9 HOH A 53 653 108 HOH HOH . Z 9 HOH A 54 654 111 HOH HOH . Z 9 HOH A 55 655 112 HOH HOH . Z 9 HOH A 56 656 113 HOH HOH . Z 9 HOH A 57 657 114 HOH HOH . Z 9 HOH A 58 658 116 HOH HOH . Z 9 HOH A 59 659 117 HOH HOH . Z 9 HOH A 60 660 118 HOH HOH . Z 9 HOH A 61 661 119 HOH HOH . Z 9 HOH A 62 662 209 HOH HOH . Z 9 HOH A 63 663 212 HOH HOH . Z 9 HOH A 64 664 213 HOH HOH . Z 9 HOH A 65 665 214 HOH HOH . Z 9 HOH A 66 666 217 HOH HOH . Z 9 HOH A 67 667 218 HOH HOH . Z 9 HOH A 68 668 219 HOH HOH . Z 9 HOH A 69 669 220 HOH HOH . Z 9 HOH A 70 670 221 HOH HOH . Z 9 HOH A 71 671 222 HOH HOH . Z 9 HOH A 72 672 244 HOH HOH . Z 9 HOH A 73 673 245 HOH HOH . Z 9 HOH A 74 674 246 HOH HOH . Z 9 HOH A 75 675 249 HOH HOH . Z 9 HOH A 76 676 250 HOH HOH . Z 9 HOH A 77 677 256 HOH HOH . Z 9 HOH A 78 678 257 HOH HOH . Z 9 HOH A 79 679 275 HOH HOH . Z 9 HOH A 80 680 277 HOH HOH . Z 9 HOH A 81 681 278 HOH HOH . Z 9 HOH A 82 682 279 HOH HOH . Z 9 HOH A 83 683 280 HOH HOH . Z 9 HOH A 84 684 282 HOH HOH . Z 9 HOH A 85 685 283 HOH HOH . Z 9 HOH A 86 686 284 HOH HOH . Z 9 HOH A 87 687 285 HOH HOH . Z 9 HOH A 88 688 293 HOH HOH . Z 9 HOH A 89 689 302 HOH HOH . Z 9 HOH A 90 690 305 HOH HOH . Z 9 HOH A 91 691 314 HOH HOH . Z 9 HOH A 92 692 324 HOH HOH . Z 9 HOH A 93 693 325 HOH HOH . Z 9 HOH A 94 694 357 HOH HOH . Z 9 HOH A 95 695 359 HOH HOH . Z 9 HOH A 96 696 362 HOH HOH . Z 9 HOH A 97 697 365 HOH HOH . Z 9 HOH A 98 698 369 HOH HOH . Z 9 HOH A 99 699 378 HOH HOH . Z 9 HOH A 100 700 380 HOH HOH . Z 9 HOH A 101 701 389 HOH HOH . Z 9 HOH A 102 702 390 HOH HOH . Z 9 HOH A 103 703 391 HOH HOH . Z 9 HOH A 104 704 392 HOH HOH . AA 9 HOH B 1 501 216 HOH HOH . AA 9 HOH B 2 502 1 HOH HOH . AA 9 HOH B 3 503 2 HOH HOH . AA 9 HOH B 4 504 3 HOH HOH . AA 9 HOH B 5 505 4 HOH HOH . AA 9 HOH B 6 506 5 HOH HOH . AA 9 HOH B 7 507 6 HOH HOH . AA 9 HOH B 8 508 7 HOH HOH . AA 9 HOH B 9 509 8 HOH HOH . AA 9 HOH B 10 510 9 HOH HOH . AA 9 HOH B 11 511 11 HOH HOH . AA 9 HOH B 12 512 12 HOH HOH . AA 9 HOH B 13 513 13 HOH HOH . AA 9 HOH B 14 514 14 HOH HOH . AA 9 HOH B 15 515 15 HOH HOH . AA 9 HOH B 16 516 16 HOH HOH . AA 9 HOH B 17 517 17 HOH HOH . AA 9 HOH B 18 518 18 HOH HOH . AA 9 HOH B 19 519 19 HOH HOH . AA 9 HOH B 20 520 20 HOH HOH . AA 9 HOH B 21 521 21 HOH HOH . AA 9 HOH B 22 522 22 HOH HOH . AA 9 HOH B 23 523 23 HOH HOH . AA 9 HOH B 24 524 24 HOH HOH . AA 9 HOH B 25 525 25 HOH HOH . AA 9 HOH B 26 526 26 HOH HOH . AA 9 HOH B 27 527 27 HOH HOH . AA 9 HOH B 28 528 28 HOH HOH . AA 9 HOH B 29 529 29 HOH HOH . AA 9 HOH B 30 530 30 HOH HOH . AA 9 HOH B 31 531 31 HOH HOH . AA 9 HOH B 32 532 32 HOH HOH . AA 9 HOH B 33 533 33 HOH HOH . AA 9 HOH B 34 534 34 HOH HOH . AA 9 HOH B 35 535 35 HOH HOH . AA 9 HOH B 36 536 36 HOH HOH . AA 9 HOH B 37 537 37 HOH HOH . AA 9 HOH B 38 538 38 HOH HOH . AA 9 HOH B 39 539 39 HOH HOH . AA 9 HOH B 40 540 40 HOH HOH . AA 9 HOH B 41 541 41 HOH HOH . AA 9 HOH B 42 542 42 HOH HOH . AA 9 HOH B 43 543 43 HOH HOH . AA 9 HOH B 44 544 44 HOH HOH . AA 9 HOH B 45 545 74 HOH HOH . AA 9 HOH B 46 546 120 HOH HOH . AA 9 HOH B 47 547 121 HOH HOH . AA 9 HOH B 48 548 122 HOH HOH . AA 9 HOH B 49 549 124 HOH HOH . AA 9 HOH B 50 550 203 HOH HOH . AA 9 HOH B 51 551 223 HOH HOH . AA 9 HOH B 52 552 224 HOH HOH . AA 9 HOH B 53 553 225 HOH HOH . AA 9 HOH B 54 554 226 HOH HOH . AA 9 HOH B 55 555 227 HOH HOH . AA 9 HOH B 56 556 228 HOH HOH . AA 9 HOH B 57 557 230 HOH HOH . AA 9 HOH B 58 558 231 HOH HOH . AA 9 HOH B 59 559 232 HOH HOH . AA 9 HOH B 60 560 233 HOH HOH . AA 9 HOH B 61 561 234 HOH HOH . AA 9 HOH B 62 562 235 HOH HOH . AA 9 HOH B 63 563 236 HOH HOH . AA 9 HOH B 64 564 237 HOH HOH . AA 9 HOH B 65 565 238 HOH HOH . AA 9 HOH B 66 566 239 HOH HOH . AA 9 HOH B 67 567 242 HOH HOH . AA 9 HOH B 68 568 243 HOH HOH . AA 9 HOH B 69 569 248 HOH HOH . AA 9 HOH B 70 570 259 HOH HOH . AA 9 HOH B 71 571 262 HOH HOH . AA 9 HOH B 72 572 264 HOH HOH . AA 9 HOH B 73 573 266 HOH HOH . AA 9 HOH B 74 574 267 HOH HOH . AA 9 HOH B 75 575 268 HOH HOH . AA 9 HOH B 76 576 307 HOH HOH . AA 9 HOH B 77 577 309 HOH HOH . AA 9 HOH B 78 578 312 HOH HOH . AA 9 HOH B 79 579 313 HOH HOH . AA 9 HOH B 80 580 315 HOH HOH . AA 9 HOH B 81 581 343 HOH HOH . AA 9 HOH B 82 582 352 HOH HOH . AA 9 HOH B 83 583 353 HOH HOH . AA 9 HOH B 84 584 354 HOH HOH . AA 9 HOH B 85 585 356 HOH HOH . AA 9 HOH B 86 586 358 HOH HOH . AA 9 HOH B 87 587 361 HOH HOH . AA 9 HOH B 88 588 368 HOH HOH . AA 9 HOH B 89 589 370 HOH HOH . AA 9 HOH B 90 590 372 HOH HOH . AA 9 HOH B 91 591 375 HOH HOH . AA 9 HOH B 92 592 376 HOH HOH . AA 9 HOH B 93 593 377 HOH HOH . AA 9 HOH B 94 594 387 HOH HOH . AA 9 HOH B 95 595 388 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . V 4 6.468 -24.974 1.25 1 41.88 ? C1 EDO 410 B 1 HETATM 2 O O1 EDO . . . V 4 6.727 -26.288 1.778 1 41.58 ? O1 EDO 410 B 1 HETATM 3 C C2 EDO . . . V 4 5.72 -25.054 -0.079 1 42.02 ? C2 EDO 410 B 1 HETATM 4 O O2 EDO . . . V 4 6.248 -26.099 -0.898 1 41.64 ? O2 EDO 410 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #