data_4H0X # _model_server_result.job_id khhJILz5IcTw5-6_-18C2w _model_server_result.datetime_utc '2024-11-26 09:41:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":412}' # _entry.id 4H0X # _exptl.entry_id 4H0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 22 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H0X _cell.length_a 54.078 _cell.length_b 134.654 _cell.length_c 152.637 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N ? 5 V N N ? 5 W N N ? 5 X N N ? 5 Y N N ? 5 Z N N ? 5 AA N N ? 5 BA N N ? 5 CA N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 132 n n C1 C2 EDO sing 133 n n C1 H11 EDO sing 134 n n C1 H12 EDO sing 135 n n O1 HO1 EDO sing 136 n n C2 O2 EDO sing 137 n n C2 H21 EDO sing 138 n n C2 H22 EDO sing 139 n n O2 HO2 EDO sing 140 n n # _atom_sites.entry_id 4H0X _atom_sites.fract_transf_matrix[1][1] 0.018492 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAD A 1 501 500 NAD NAD . D 4 PO4 A 1 502 600 PO4 PO4 . E 5 EDO A 1 503 1 EDO EDO . F 5 EDO A 1 504 2 EDO EDO . G 5 EDO A 1 505 3 EDO EDO . H 5 EDO A 1 506 7 EDO EDO . I 5 EDO A 1 507 17 EDO EDO . J 5 EDO A 1 508 18 EDO EDO . K 5 EDO A 1 509 27 EDO EDO . L 5 EDO A 1 510 28 EDO EDO . M 5 EDO A 1 511 522 EDO EDO . N 6 CA B 1 401 400 CA CA . O 7 ATP B 1 402 500 ATP ATP . P 8 LAR B 1 403 600 LAR LAR . Q 5 EDO B 1 404 11 EDO EDO . R 5 EDO B 1 405 12 EDO EDO . S 5 EDO B 1 406 15 EDO EDO . T 5 EDO B 1 407 16 EDO EDO . U 5 EDO B 1 408 20 EDO EDO . V 5 EDO B 1 409 23 EDO EDO . W 5 EDO B 1 410 24 EDO EDO . X 5 EDO B 1 411 31 EDO EDO . Y 5 EDO B 1 412 32 EDO EDO . Z 5 EDO B 1 413 38 EDO EDO . AA 5 EDO B 1 414 42 EDO EDO . BA 5 EDO B 1 415 47 EDO EDO . CA 5 EDO B 1 416 48 EDO EDO . DA 9 HOH A 1 601 46 HOH HOH . DA 9 HOH A 2 602 47 HOH HOH . DA 9 HOH A 3 603 48 HOH HOH . DA 9 HOH A 4 604 49 HOH HOH . DA 9 HOH A 5 605 50 HOH HOH . DA 9 HOH A 6 606 51 HOH HOH . DA 9 HOH A 7 607 52 HOH HOH . DA 9 HOH A 8 608 55 HOH HOH . DA 9 HOH A 9 609 56 HOH HOH . DA 9 HOH A 10 610 57 HOH HOH . DA 9 HOH A 11 611 58 HOH HOH . DA 9 HOH A 12 612 59 HOH HOH . DA 9 HOH A 13 613 60 HOH HOH . DA 9 HOH A 14 614 61 HOH HOH . DA 9 HOH A 15 615 63 HOH HOH . DA 9 HOH A 16 616 64 HOH HOH . DA 9 HOH A 17 617 65 HOH HOH . DA 9 HOH A 18 618 66 HOH HOH . DA 9 HOH A 19 619 68 HOH HOH . DA 9 HOH A 20 620 69 HOH HOH . DA 9 HOH A 21 621 70 HOH HOH . DA 9 HOH A 22 622 71 HOH HOH . DA 9 HOH A 23 623 72 HOH HOH . DA 9 HOH A 24 624 73 HOH HOH . DA 9 HOH A 25 625 75 HOH HOH . DA 9 HOH A 26 626 76 HOH HOH . DA 9 HOH A 27 627 77 HOH HOH . DA 9 HOH A 28 628 78 HOH HOH . DA 9 HOH A 29 629 79 HOH HOH . DA 9 HOH A 30 630 80 HOH HOH . DA 9 HOH A 31 631 81 HOH HOH . DA 9 HOH A 32 632 82 HOH HOH . DA 9 HOH A 33 633 83 HOH HOH . DA 9 HOH A 34 634 84 HOH HOH . DA 9 HOH A 35 635 85 HOH HOH . DA 9 HOH A 36 636 86 HOH HOH . DA 9 HOH A 37 637 87 HOH HOH . DA 9 HOH A 38 638 89 HOH HOH . DA 9 HOH A 39 639 92 HOH HOH . DA 9 HOH A 40 640 93 HOH HOH . DA 9 HOH A 41 641 95 HOH HOH . DA 9 HOH A 42 642 96 HOH HOH . DA 9 HOH A 43 643 97 HOH HOH . DA 9 HOH A 44 644 99 HOH HOH . DA 9 HOH A 45 645 100 HOH HOH . DA 9 HOH A 46 646 102 HOH HOH . DA 9 HOH A 47 647 103 HOH HOH . DA 9 HOH A 48 648 104 HOH HOH . DA 9 HOH A 49 649 105 HOH HOH . DA 9 HOH A 50 650 106 HOH HOH . DA 9 HOH A 51 651 107 HOH HOH . DA 9 HOH A 52 652 108 HOH HOH . DA 9 HOH A 53 653 110 HOH HOH . DA 9 HOH A 54 654 111 HOH HOH . DA 9 HOH A 55 655 112 HOH HOH . DA 9 HOH A 56 656 113 HOH HOH . DA 9 HOH A 57 657 114 HOH HOH . DA 9 HOH A 58 658 115 HOH HOH . DA 9 HOH A 59 659 116 HOH HOH . DA 9 HOH A 60 660 117 HOH HOH . DA 9 HOH A 61 661 118 HOH HOH . DA 9 HOH A 62 662 131 HOH HOH . DA 9 HOH A 63 663 132 HOH HOH . DA 9 HOH A 64 664 135 HOH HOH . DA 9 HOH A 65 665 136 HOH HOH . DA 9 HOH A 66 666 137 HOH HOH . DA 9 HOH A 67 667 138 HOH HOH . DA 9 HOH A 68 668 141 HOH HOH . DA 9 HOH A 69 669 142 HOH HOH . DA 9 HOH A 70 670 143 HOH HOH . DA 9 HOH A 71 671 144 HOH HOH . DA 9 HOH A 72 672 145 HOH HOH . DA 9 HOH A 73 673 165 HOH HOH . DA 9 HOH A 74 674 166 HOH HOH . DA 9 HOH A 75 675 171 HOH HOH . DA 9 HOH A 76 676 174 HOH HOH . DA 9 HOH A 77 677 188 HOH HOH . DA 9 HOH A 78 678 189 HOH HOH . DA 9 HOH A 79 679 191 HOH HOH . DA 9 HOH A 80 680 192 HOH HOH . DA 9 HOH A 81 681 193 HOH HOH . DA 9 HOH A 82 682 194 HOH HOH . DA 9 HOH A 83 683 195 HOH HOH . DA 9 HOH A 84 684 196 HOH HOH . DA 9 HOH A 85 685 197 HOH HOH . DA 9 HOH A 86 686 198 HOH HOH . DA 9 HOH A 87 687 199 HOH HOH . DA 9 HOH A 88 688 202 HOH HOH . DA 9 HOH A 89 689 206 HOH HOH . DA 9 HOH A 90 690 212 HOH HOH . DA 9 HOH A 91 691 213 HOH HOH . DA 9 HOH A 92 692 214 HOH HOH . DA 9 HOH A 93 693 217 HOH HOH . DA 9 HOH A 94 694 225 HOH HOH . DA 9 HOH A 95 695 232 HOH HOH . DA 9 HOH A 96 696 233 HOH HOH . DA 9 HOH A 97 697 257 HOH HOH . DA 9 HOH A 98 698 259 HOH HOH . DA 9 HOH A 99 699 265 HOH HOH . DA 9 HOH A 100 700 277 HOH HOH . DA 9 HOH A 101 701 278 HOH HOH . DA 9 HOH A 102 702 285 HOH HOH . DA 9 HOH A 103 703 286 HOH HOH . DA 9 HOH A 104 704 287 HOH HOH . DA 9 HOH A 105 705 288 HOH HOH . DA 9 HOH A 106 706 289 HOH HOH . DA 9 HOH A 107 707 290 HOH HOH . DA 9 HOH A 108 708 291 HOH HOH . DA 9 HOH A 109 709 292 HOH HOH . DA 9 HOH A 110 710 293 HOH HOH . EA 9 HOH B 1 501 139 HOH HOH . EA 9 HOH B 2 502 1 HOH HOH . EA 9 HOH B 3 503 2 HOH HOH . EA 9 HOH B 4 504 4 HOH HOH . EA 9 HOH B 5 505 5 HOH HOH . EA 9 HOH B 6 506 6 HOH HOH . EA 9 HOH B 7 507 7 HOH HOH . EA 9 HOH B 8 508 8 HOH HOH . EA 9 HOH B 9 509 9 HOH HOH . EA 9 HOH B 10 510 10 HOH HOH . EA 9 HOH B 11 511 11 HOH HOH . EA 9 HOH B 12 512 12 HOH HOH . EA 9 HOH B 13 513 13 HOH HOH . EA 9 HOH B 14 514 14 HOH HOH . EA 9 HOH B 15 515 15 HOH HOH . EA 9 HOH B 16 516 16 HOH HOH . EA 9 HOH B 17 517 17 HOH HOH . EA 9 HOH B 18 518 18 HOH HOH . EA 9 HOH B 19 519 19 HOH HOH . EA 9 HOH B 20 520 20 HOH HOH . EA 9 HOH B 21 521 21 HOH HOH . EA 9 HOH B 22 522 22 HOH HOH . EA 9 HOH B 23 523 23 HOH HOH . EA 9 HOH B 24 524 24 HOH HOH . EA 9 HOH B 25 525 25 HOH HOH . EA 9 HOH B 26 526 26 HOH HOH . EA 9 HOH B 27 527 27 HOH HOH . EA 9 HOH B 28 528 28 HOH HOH . EA 9 HOH B 29 529 29 HOH HOH . EA 9 HOH B 30 530 30 HOH HOH . EA 9 HOH B 31 531 31 HOH HOH . EA 9 HOH B 32 532 32 HOH HOH . EA 9 HOH B 33 533 33 HOH HOH . EA 9 HOH B 34 534 34 HOH HOH . EA 9 HOH B 35 535 35 HOH HOH . EA 9 HOH B 36 536 36 HOH HOH . EA 9 HOH B 37 537 37 HOH HOH . EA 9 HOH B 38 538 38 HOH HOH . EA 9 HOH B 39 539 39 HOH HOH . EA 9 HOH B 40 540 40 HOH HOH . EA 9 HOH B 41 541 41 HOH HOH . EA 9 HOH B 42 542 42 HOH HOH . EA 9 HOH B 43 543 43 HOH HOH . EA 9 HOH B 44 544 44 HOH HOH . EA 9 HOH B 45 545 74 HOH HOH . EA 9 HOH B 46 546 120 HOH HOH . EA 9 HOH B 47 547 121 HOH HOH . EA 9 HOH B 48 548 122 HOH HOH . EA 9 HOH B 49 549 123 HOH HOH . EA 9 HOH B 50 550 124 HOH HOH . EA 9 HOH B 51 551 125 HOH HOH . EA 9 HOH B 52 552 128 HOH HOH . EA 9 HOH B 53 553 129 HOH HOH . EA 9 HOH B 54 554 146 HOH HOH . EA 9 HOH B 55 555 147 HOH HOH . EA 9 HOH B 56 556 148 HOH HOH . EA 9 HOH B 57 557 149 HOH HOH . EA 9 HOH B 58 558 150 HOH HOH . EA 9 HOH B 59 559 151 HOH HOH . EA 9 HOH B 60 560 153 HOH HOH . EA 9 HOH B 61 561 154 HOH HOH . EA 9 HOH B 62 562 155 HOH HOH . EA 9 HOH B 63 563 156 HOH HOH . EA 9 HOH B 64 564 157 HOH HOH . EA 9 HOH B 65 565 158 HOH HOH . EA 9 HOH B 66 566 159 HOH HOH . EA 9 HOH B 67 567 160 HOH HOH . EA 9 HOH B 68 568 161 HOH HOH . EA 9 HOH B 69 569 162 HOH HOH . EA 9 HOH B 70 570 163 HOH HOH . EA 9 HOH B 71 571 164 HOH HOH . EA 9 HOH B 72 572 169 HOH HOH . EA 9 HOH B 73 573 172 HOH HOH . EA 9 HOH B 74 574 178 HOH HOH . EA 9 HOH B 75 575 179 HOH HOH . EA 9 HOH B 76 576 180 HOH HOH . EA 9 HOH B 77 577 182 HOH HOH . EA 9 HOH B 78 578 183 HOH HOH . EA 9 HOH B 79 579 184 HOH HOH . EA 9 HOH B 80 580 185 HOH HOH . EA 9 HOH B 81 581 186 HOH HOH . EA 9 HOH B 82 582 219 HOH HOH . EA 9 HOH B 83 583 220 HOH HOH . EA 9 HOH B 84 584 221 HOH HOH . EA 9 HOH B 85 585 223 HOH HOH . EA 9 HOH B 86 586 224 HOH HOH . EA 9 HOH B 87 587 226 HOH HOH . EA 9 HOH B 88 588 247 HOH HOH . EA 9 HOH B 89 589 250 HOH HOH . EA 9 HOH B 90 590 252 HOH HOH . EA 9 HOH B 91 591 253 HOH HOH . EA 9 HOH B 92 592 254 HOH HOH . EA 9 HOH B 93 593 255 HOH HOH . EA 9 HOH B 94 594 256 HOH HOH . EA 9 HOH B 95 595 260 HOH HOH . EA 9 HOH B 96 596 261 HOH HOH . EA 9 HOH B 97 597 272 HOH HOH . EA 9 HOH B 98 598 273 HOH HOH . EA 9 HOH B 99 599 275 HOH HOH . EA 9 HOH B 100 600 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . Y 5 6.501 -25.088 1.281 1 35.09 ? C1 EDO 412 B 1 HETATM 2 O O1 EDO . . . Y 5 6.469 -26.45 1.763 1 34.67 ? O1 EDO 412 B 1 HETATM 3 C C2 EDO . . . Y 5 5.607 -24.962 0.053 1 34.7 ? C2 EDO 412 B 1 HETATM 4 O O2 EDO . . . Y 5 6.066 -25.875 -0.953 1 34.71 ? O2 EDO 412 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #