data_4H2J # _model_server_result.job_id xokq0T-bkvWNbKQ1uOhT7A _model_server_result.datetime_utc '2024-11-02 19:32:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h2j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4H2J # _exptl.entry_id 4H2J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 495.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~4~-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]-N~1~-[4-(1H-imidazol-2-yl)phenyl]-2-nitrobenzene-1,4-dicarboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H2J _cell.length_a 63.16 _cell.length_b 68.961 _cell.length_c 111.735 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H2J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C26 H21 N7 O4' _chem_comp.formula_weight 495.489 _chem_comp.id 0YU _chem_comp.mon_nstd_flag . _chem_comp.name N~4~-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]-N~1~-[4-(1H-imidazol-2-yl)phenyl]-2-nitrobenzene-1,4-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAP CAR 0YU sing 1 n n CAP NAT 0YU sing 2 n n CAI CAE 0YU doub 3 n y CAI CBF 0YU sing 4 n y CAE CBD 0YU sing 5 n y CAR NAX 0YU sing 6 n n NAX CBB 0YU doub 7 n n NAT CBB 0YU sing 8 n n CBB CBF 0YU sing 9 n n CBF CAJ 0YU doub 10 n y CBD NAV 0YU sing 11 n n CBD CAF 0YU doub 12 n y NAV CAZ 0YU sing 13 n n OAC NBK 0YU sing 14 n n CAJ CAF 0YU sing 15 n y CAH CAL 0YU doub 16 n y CAH CBE 0YU sing 17 n y NBK CBJ 0YU sing 18 n n NBK OAD 0YU doub 19 n n CAO CBJ 0YU doub 20 n y CAO CBH 0YU sing 21 n y CAZ CBH 0YU sing 22 n n CAZ OAA 0YU doub 23 n n CBJ CBI 0YU sing 24 n y NAW CBA 0YU sing 25 n n NAW CBE 0YU sing 26 n n CBH CAM 0YU doub 27 n y CAL CBG 0YU sing 28 n y CBI CAN 0YU doub 29 n y CBI CBA 0YU sing 30 n n CAM CAN 0YU sing 31 n y CBA OAB 0YU doub 32 n n CBE CAG 0YU doub 33 n y CBG CBC 0YU sing 34 n n CBG CAK 0YU doub 35 n y CAG CAK 0YU sing 36 n y CBC NAU 0YU sing 37 n y CBC NAY 0YU doub 38 n y NAU CAQ 0YU sing 39 n y NAY CAS 0YU sing 40 n y CAQ CAS 0YU doub 41 n y NAU H1 0YU sing 42 n n CAQ H2 0YU sing 43 n n CAS H3 0YU sing 44 n n CAL H5 0YU sing 45 n n CAH H6 0YU sing 46 n n CAK H7 0YU sing 47 n n CAG H8 0YU sing 48 n n NAW H9 0YU sing 49 n n CAO H10 0YU sing 50 n n CAN H11 0YU sing 51 n n CAM H12 0YU sing 52 n n NAV H13 0YU sing 53 n n CAF H14 0YU sing 54 n n CAJ H15 0YU sing 55 n n CAE H16 0YU sing 56 n n CAI H17 0YU sing 57 n n CAR H21 0YU sing 58 n n CAR H22 0YU sing 59 n n CAP H23 0YU sing 60 n n CAP H24 0YU sing 61 n n NAT H25 0YU sing 62 n n # _atom_sites.entry_id 4H2J _atom_sites.fract_transf_matrix[1][1] 0.015833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0YU A 1 301 1 0YU DRG . D 2 0YU B 1 301 1 0YU DRG . E 3 HOH A 1 401 1 HOH HOH . E 3 HOH A 2 402 2 HOH HOH . E 3 HOH A 3 403 4 HOH HOH . E 3 HOH A 4 404 10 HOH HOH . E 3 HOH A 5 405 12 HOH HOH . E 3 HOH A 6 406 13 HOH HOH . E 3 HOH A 7 407 14 HOH HOH . E 3 HOH A 8 408 16 HOH HOH . E 3 HOH A 9 409 17 HOH HOH . E 3 HOH A 10 410 18 HOH HOH . E 3 HOH A 11 411 19 HOH HOH . E 3 HOH A 12 412 21 HOH HOH . E 3 HOH A 13 413 22 HOH HOH . E 3 HOH A 14 414 24 HOH HOH . E 3 HOH A 15 415 25 HOH HOH . E 3 HOH A 16 416 28 HOH HOH . E 3 HOH A 17 417 29 HOH HOH . E 3 HOH A 18 418 31 HOH HOH . E 3 HOH A 19 419 32 HOH HOH . E 3 HOH A 20 420 36 HOH HOH . E 3 HOH A 21 421 37 HOH HOH . E 3 HOH A 22 422 42 HOH HOH . E 3 HOH A 23 423 45 HOH HOH . E 3 HOH A 24 424 46 HOH HOH . E 3 HOH A 25 425 48 HOH HOH . E 3 HOH A 26 426 50 HOH HOH . E 3 HOH A 27 427 51 HOH HOH . E 3 HOH A 28 428 52 HOH HOH . E 3 HOH A 29 429 54 HOH HOH . E 3 HOH A 30 430 55 HOH HOH . E 3 HOH A 31 431 56 HOH HOH . E 3 HOH A 32 432 57 HOH HOH . E 3 HOH A 33 433 59 HOH HOH . E 3 HOH A 34 434 62 HOH HOH . E 3 HOH A 35 435 64 HOH HOH . E 3 HOH A 36 436 67 HOH HOH . E 3 HOH A 37 437 69 HOH HOH . E 3 HOH A 38 438 72 HOH HOH . E 3 HOH A 39 439 74 HOH HOH . E 3 HOH A 40 440 75 HOH HOH . E 3 HOH A 41 441 76 HOH HOH . E 3 HOH A 42 442 78 HOH HOH . E 3 HOH A 43 443 80 HOH HOH . E 3 HOH A 44 444 84 HOH HOH . E 3 HOH A 45 445 85 HOH HOH . E 3 HOH A 46 446 86 HOH HOH . E 3 HOH A 47 447 87 HOH HOH . E 3 HOH A 48 448 88 HOH HOH . E 3 HOH A 49 449 89 HOH HOH . E 3 HOH A 50 450 91 HOH HOH . E 3 HOH A 51 451 94 HOH HOH . E 3 HOH A 52 452 95 HOH HOH . E 3 HOH A 53 453 98 HOH HOH . E 3 HOH A 54 454 102 HOH HOH . E 3 HOH A 55 455 103 HOH HOH . E 3 HOH A 56 456 104 HOH HOH . E 3 HOH A 57 457 109 HOH HOH . E 3 HOH A 58 458 114 HOH HOH . E 3 HOH A 59 459 117 HOH HOH . E 3 HOH A 60 460 118 HOH HOH . E 3 HOH A 61 461 120 HOH HOH . E 3 HOH A 62 462 126 HOH HOH . E 3 HOH A 63 463 127 HOH HOH . F 3 HOH B 1 401 3 HOH HOH . F 3 HOH B 2 402 5 HOH HOH . F 3 HOH B 3 403 6 HOH HOH . F 3 HOH B 4 404 7 HOH HOH . F 3 HOH B 5 405 8 HOH HOH . F 3 HOH B 6 406 9 HOH HOH . F 3 HOH B 7 407 11 HOH HOH . F 3 HOH B 8 408 15 HOH HOH . F 3 HOH B 9 409 20 HOH HOH . F 3 HOH B 10 410 23 HOH HOH . F 3 HOH B 11 411 26 HOH HOH . F 3 HOH B 12 412 27 HOH HOH . F 3 HOH B 13 413 30 HOH HOH . F 3 HOH B 14 414 33 HOH HOH . F 3 HOH B 15 415 34 HOH HOH . F 3 HOH B 16 416 35 HOH HOH . F 3 HOH B 17 417 38 HOH HOH . F 3 HOH B 18 418 39 HOH HOH . F 3 HOH B 19 419 41 HOH HOH . F 3 HOH B 20 420 43 HOH HOH . F 3 HOH B 21 421 44 HOH HOH . F 3 HOH B 22 422 47 HOH HOH . F 3 HOH B 23 423 49 HOH HOH . F 3 HOH B 24 424 53 HOH HOH . F 3 HOH B 25 425 58 HOH HOH . F 3 HOH B 26 426 60 HOH HOH . F 3 HOH B 27 427 61 HOH HOH . F 3 HOH B 28 428 63 HOH HOH . F 3 HOH B 29 429 65 HOH HOH . F 3 HOH B 30 430 68 HOH HOH . F 3 HOH B 31 431 70 HOH HOH . F 3 HOH B 32 432 71 HOH HOH . F 3 HOH B 33 433 73 HOH HOH . F 3 HOH B 34 434 79 HOH HOH . F 3 HOH B 35 435 81 HOH HOH . F 3 HOH B 36 436 82 HOH HOH . F 3 HOH B 37 437 83 HOH HOH . F 3 HOH B 38 438 92 HOH HOH . F 3 HOH B 39 439 93 HOH HOH . F 3 HOH B 40 440 96 HOH HOH . F 3 HOH B 41 441 97 HOH HOH . F 3 HOH B 42 442 99 HOH HOH . F 3 HOH B 43 443 100 HOH HOH . F 3 HOH B 44 444 101 HOH HOH . F 3 HOH B 45 445 105 HOH HOH . F 3 HOH B 46 446 106 HOH HOH . F 3 HOH B 47 447 107 HOH HOH . F 3 HOH B 48 448 108 HOH HOH . F 3 HOH B 49 449 110 HOH HOH . F 3 HOH B 50 450 111 HOH HOH . F 3 HOH B 51 451 112 HOH HOH . F 3 HOH B 52 452 113 HOH HOH . F 3 HOH B 53 453 115 HOH HOH . F 3 HOH B 54 454 116 HOH HOH . F 3 HOH B 55 455 121 HOH HOH . F 3 HOH B 56 456 122 HOH HOH . F 3 HOH B 57 457 123 HOH HOH . F 3 HOH B 58 458 124 HOH HOH . F 3 HOH B 59 459 125 HOH HOH . F 3 HOH B 60 460 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAU 0YU . . . C 2 41.856 21.498 62.804 1 40.24 ? NAU 0YU 301 A 1 HETATM 2 C CAQ 0YU . . . C 2 42.072 20.385 63.728 1 38.05 ? CAQ 0YU 301 A 1 HETATM 3 C CAS 0YU . . . C 2 43.505 20.083 63.499 1 39.62 ? CAS 0YU 301 A 1 HETATM 4 N NAY 0YU . . . C 2 44.018 21.269 62.931 1 39.03 ? NAY 0YU 301 A 1 HETATM 5 C CBC 0YU . . . C 2 43.034 22.038 62.479 1 40.94 ? CBC 0YU 301 A 1 HETATM 6 C CBG 0YU . . . C 2 43.277 23.232 61.925 1 35.44 ? CBG 0YU 301 A 1 HETATM 7 C CAL 0YU . . . C 2 42.393 23.889 61.104 1 32.5 ? CAL 0YU 301 A 1 HETATM 8 C CAH 0YU . . . C 2 42.696 25.143 60.58 1 27.55 ? CAH 0YU 301 A 1 HETATM 9 C CAK 0YU . . . C 2 44.45 23.897 62.212 1 40.49 ? CAK 0YU 301 A 1 HETATM 10 C CAG 0YU . . . C 2 44.767 25.145 61.701 1 38.36 ? CAG 0YU 301 A 1 HETATM 11 C CBE 0YU . . . C 2 43.893 25.796 60.838 1 34.56 ? CBE 0YU 301 A 1 HETATM 12 N NAW 0YU . . . C 2 44.195 27.037 60.456 1 33.24 ? NAW 0YU 301 A 1 HETATM 13 C CBA 0YU . . . C 2 43.498 27.757 59.574 1 34.86 ? CBA 0YU 301 A 1 HETATM 14 O OAB 0YU . . . C 2 42.624 27.283 58.909 1 34.54 ? OAB 0YU 301 A 1 HETATM 15 C CBI 0YU . . . C 2 43.714 29.15 59.52 1 34.64 ? CBI 0YU 301 A 1 HETATM 16 C CBJ 0YU . . . C 2 43.722 29.898 58.364 1 38.25 ? CBJ 0YU 301 A 1 HETATM 17 C CAO 0YU . . . C 2 43.848 31.277 58.316 1 34.61 ? CAO 0YU 301 A 1 HETATM 18 N NBK 0YU . . . C 2 43.635 29.237 57.272 1 49.78 ? NBK 0YU 301 A 1 HETATM 19 O OAD 0YU . . . C 2 43.787 28.449 57.305 1 64.94 ? OAD 0YU 301 A 1 HETATM 20 O OAC 0YU . . . C 2 43.426 29.762 56.344 1 56.06 ? OAC 0YU 301 A 1 HETATM 21 C CAN 0YU . . . C 2 43.772 29.902 60.684 1 35.21 ? CAN 0YU 301 A 1 HETATM 22 C CAM 0YU . . . C 2 43.894 31.292 60.662 1 33.34 ? CAM 0YU 301 A 1 HETATM 23 C CBH 0YU . . . C 2 43.944 31.989 59.474 1 35.83 ? CBH 0YU 301 A 1 HETATM 24 C CAZ 0YU . . . C 2 44.048 33.375 59.41 1 43.76 ? CAZ 0YU 301 A 1 HETATM 25 O OAA 0YU . . . C 2 43.343 33.979 58.617 1 39.74 ? OAA 0YU 301 A 1 HETATM 26 N NAV 0YU . . . C 2 44.895 33.954 60.261 1 40.48 ? NAV 0YU 301 A 1 HETATM 27 C CBD 0YU . . . C 2 45.004 35.295 60.358 1 42.58 ? CBD 0YU 301 A 1 HETATM 28 C CAF 0YU . . . C 2 44.63 36.18 59.377 1 49.02 ? CAF 0YU 301 A 1 HETATM 29 C CAJ 0YU . . . C 2 44.765 37.546 59.569 1 48.36 ? CAJ 0YU 301 A 1 HETATM 30 C CAE 0YU . . . C 2 45.5 35.827 61.528 1 44.64 ? CAE 0YU 301 A 1 HETATM 31 C CAI 0YU . . . C 2 45.632 37.177 61.734 1 44.83 ? CAI 0YU 301 A 1 HETATM 32 C CBF 0YU . . . C 2 45.259 38.042 60.755 1 52.55 ? CBF 0YU 301 A 1 HETATM 33 C CBB 0YU . . . C 2 45.413 39.35 60.969 1 60.32 ? CBB 0YU 301 A 1 HETATM 34 N NAX 0YU . . . C 2 45.275 40.22 59.979 1 57.41 ? NAX 0YU 301 A 1 HETATM 35 C CAR 0YU . . . C 2 45.532 41.523 60.49 1 66.02 ? CAR 0YU 301 A 1 HETATM 36 C CAP 0YU . . . C 2 45.572 41.326 61.985 1 66.72 ? CAP 0YU 301 A 1 HETATM 37 N NAT 0YU . . . C 2 45.795 39.905 62.123 1 60.34 ? NAT 0YU 301 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #