data_4H3O
#
_model_server_result.job_id            GVRXhXMNok0pvqR1pN0aZg 
_model_server_result.datetime_utc      '2024-11-01 01:31:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4h3o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":202}' 
#
_entry.id    4H3O 
#
_exptl.entry_id    4H3O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4H3O 
_cell.length_a            35.513 
_cell.length_b            57.234 
_cell.length_c            97.449 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4H3O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 29 A CYS 29 1_555 A SG CYS 53 A CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf2 B SG CYS 29 B CYS 29 1_555 B SG CYS 53 B CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A OE2 GLU 8 A GLU 8 1_555 D CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc2 A OE2 GLU 46 A GLU 46 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc3 D CD CD . A CD 202 1_555 L O HOH . B HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
metalc ? metalc4 B OD1 ASP 5 B ASP 5 1_555 J NA NA . B NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? 
metalc ? metalc5 B ND2 ASN 7 B ASN 7 1_555 G CD CD . B CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc6 B OD1 ASN 7 B ASN 7 1_555 G CD CD . B CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? 
metalc ? metalc7 B O ASN 7 B ASN 7 1_555 H CD CD . B CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc8 B OE2 GLU 8 B GLU 8 1_555 J NA NA . B NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc9 B OE1 GLU 8 B GLU 8 1_555 J NA NA . B NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? 
metalc ? metalc10 B OE1 GLU 19 B GLU 19 1_555 F CD CD . B CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc11 B OE2 GLU 19 B GLU 19 1_555 F CD CD . B CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc12 B NE2 HIS 22 B HIS 22 1_555 F CD CD . B CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc13 B OE1 GLU 46 B GLU 46 1_555 E CD CD . B CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc14 B OE2 GLU 46 B GLU 46 1_555 E CD CD . B CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc15 B OG SER 59 B SER 59 1_555 G CD CD . B CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc16 E CD CD . B CD 201 1_555 L O HOH . B HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc17 F CD CD . B CD 202 1_555 L O HOH . B HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc18 G CD CD . B CD 203 1_555 L O HOH . B HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc19 H CD CD . B CD 204 1_555 L O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc20 I CD CD . B CD 205 1_555 L O HOH . B HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc21 J NA NA . B NA 206 1_555 L O HOH . B HOH 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4H3O 
_atom_sites.fract_transf_matrix[1][1]    0.028159 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010262 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CD A 1 201 1 CD CD . 
D 2 CD A 1 202 2 CD CD . 
E 2 CD B 1 201 3 CD CD . 
F 2 CD B 1 202 4 CD CD . 
G 2 CD B 1 203 5 CD CD . 
H 2 CD B 1 204 6 CD CD . 
I 2 CD B 1 205 7 CD CD . 
J 3 NA B 1 206 9 NA NA . 
K 4 HOH A 1 301 3 HOH HOH . 
K 4 HOH A 2 302 5 HOH HOH . 
K 4 HOH A 3 303 6 HOH HOH . 
K 4 HOH A 4 304 7 HOH HOH . 
K 4 HOH A 5 305 8 HOH HOH . 
K 4 HOH A 6 306 9 HOH HOH . 
K 4 HOH A 7 307 10 HOH HOH . 
K 4 HOH A 8 308 12 HOH HOH . 
K 4 HOH A 9 309 13 HOH HOH . 
K 4 HOH A 10 310 16 HOH HOH . 
K 4 HOH A 11 311 21 HOH HOH . 
K 4 HOH A 12 312 23 HOH HOH . 
K 4 HOH A 13 313 24 HOH HOH . 
K 4 HOH A 14 314 27 HOH HOH . 
K 4 HOH A 15 315 28 HOH HOH . 
K 4 HOH A 16 316 29 HOH HOH . 
K 4 HOH A 17 317 30 HOH HOH . 
K 4 HOH A 18 318 33 HOH HOH . 
K 4 HOH A 19 319 36 HOH HOH . 
K 4 HOH A 20 320 38 HOH HOH . 
K 4 HOH A 21 321 39 HOH HOH . 
K 4 HOH A 22 322 40 HOH HOH . 
K 4 HOH A 23 323 42 HOH HOH . 
K 4 HOH A 24 324 43 HOH HOH . 
K 4 HOH A 25 325 45 HOH HOH . 
K 4 HOH A 26 326 47 HOH HOH . 
K 4 HOH A 27 327 48 HOH HOH . 
K 4 HOH A 28 328 49 HOH HOH . 
K 4 HOH A 29 329 51 HOH HOH . 
K 4 HOH A 30 330 52 HOH HOH . 
K 4 HOH A 31 331 54 HOH HOH . 
K 4 HOH A 32 332 58 HOH HOH . 
K 4 HOH A 33 333 59 HOH HOH . 
K 4 HOH A 34 334 60 HOH HOH . 
K 4 HOH A 35 335 62 HOH HOH . 
K 4 HOH A 36 336 63 HOH HOH . 
K 4 HOH A 37 337 64 HOH HOH . 
K 4 HOH A 38 338 67 HOH HOH . 
K 4 HOH A 39 339 74 HOH HOH . 
K 4 HOH A 40 340 75 HOH HOH . 
K 4 HOH A 41 341 76 HOH HOH . 
K 4 HOH A 42 342 79 HOH HOH . 
K 4 HOH A 43 343 85 HOH HOH . 
K 4 HOH A 44 344 87 HOH HOH . 
K 4 HOH A 45 345 88 HOH HOH . 
K 4 HOH A 46 346 90 HOH HOH . 
K 4 HOH A 47 347 95 HOH HOH . 
K 4 HOH A 48 348 102 HOH HOH . 
K 4 HOH A 49 349 104 HOH HOH . 
K 4 HOH A 50 350 113 HOH HOH . 
K 4 HOH A 51 351 115 HOH HOH . 
K 4 HOH A 52 352 116 HOH HOH . 
K 4 HOH A 53 353 117 HOH HOH . 
K 4 HOH A 54 354 118 HOH HOH . 
K 4 HOH A 55 355 119 HOH HOH . 
K 4 HOH A 56 356 123 HOH HOH . 
K 4 HOH A 57 357 124 HOH HOH . 
K 4 HOH A 58 358 125 HOH HOH . 
K 4 HOH A 59 359 128 HOH HOH . 
K 4 HOH A 60 360 129 HOH HOH . 
K 4 HOH A 61 361 132 HOH HOH . 
K 4 HOH A 62 362 133 HOH HOH . 
K 4 HOH A 63 363 135 HOH HOH . 
K 4 HOH A 64 364 138 HOH HOH . 
K 4 HOH A 65 365 139 HOH HOH . 
K 4 HOH A 66 366 140 HOH HOH . 
K 4 HOH A 67 367 142 HOH HOH . 
K 4 HOH A 68 368 144 HOH HOH . 
K 4 HOH A 69 369 148 HOH HOH . 
K 4 HOH A 70 370 149 HOH HOH . 
K 4 HOH A 71 371 151 HOH HOH . 
K 4 HOH A 72 372 152 HOH HOH . 
K 4 HOH A 73 373 153 HOH HOH . 
K 4 HOH A 74 374 156 HOH HOH . 
K 4 HOH A 75 375 157 HOH HOH . 
K 4 HOH A 76 376 159 HOH HOH . 
K 4 HOH A 77 377 160 HOH HOH . 
K 4 HOH A 78 378 161 HOH HOH . 
K 4 HOH A 79 379 162 HOH HOH . 
K 4 HOH A 80 380 164 HOH HOH . 
K 4 HOH A 81 381 166 HOH HOH . 
K 4 HOH A 82 382 168 HOH HOH . 
K 4 HOH A 83 383 170 HOH HOH . 
K 4 HOH A 84 384 173 HOH HOH . 
K 4 HOH A 85 385 174 HOH HOH . 
K 4 HOH A 86 386 175 HOH HOH . 
K 4 HOH A 87 387 176 HOH HOH . 
K 4 HOH A 88 388 178 HOH HOH . 
K 4 HOH A 89 389 179 HOH HOH . 
K 4 HOH A 90 390 182 HOH HOH . 
K 4 HOH A 91 391 183 HOH HOH . 
K 4 HOH A 92 392 184 HOH HOH . 
K 4 HOH A 93 393 189 HOH HOH . 
K 4 HOH A 94 394 190 HOH HOH . 
K 4 HOH A 95 395 191 HOH HOH . 
K 4 HOH A 96 396 192 HOH HOH . 
K 4 HOH A 97 397 194 HOH HOH . 
K 4 HOH A 98 398 195 HOH HOH . 
L 4 HOH B 1 301 1 HOH HOH . 
L 4 HOH B 2 302 2 HOH HOH . 
L 4 HOH B 3 303 4 HOH HOH . 
L 4 HOH B 4 304 11 HOH HOH . 
L 4 HOH B 5 305 14 HOH HOH . 
L 4 HOH B 6 306 15 HOH HOH . 
L 4 HOH B 7 307 17 HOH HOH . 
L 4 HOH B 8 308 18 HOH HOH . 
L 4 HOH B 9 309 19 HOH HOH . 
L 4 HOH B 10 310 20 HOH HOH . 
L 4 HOH B 11 311 22 HOH HOH . 
L 4 HOH B 12 312 25 HOH HOH . 
L 4 HOH B 13 313 26 HOH HOH . 
L 4 HOH B 14 314 31 HOH HOH . 
L 4 HOH B 15 315 32 HOH HOH . 
L 4 HOH B 16 316 34 HOH HOH . 
L 4 HOH B 17 317 35 HOH HOH . 
L 4 HOH B 18 318 37 HOH HOH . 
L 4 HOH B 19 319 41 HOH HOH . 
L 4 HOH B 20 320 44 HOH HOH . 
L 4 HOH B 21 321 46 HOH HOH . 
L 4 HOH B 22 322 50 HOH HOH . 
L 4 HOH B 23 323 53 HOH HOH . 
L 4 HOH B 24 324 55 HOH HOH . 
L 4 HOH B 25 325 56 HOH HOH . 
L 4 HOH B 26 326 57 HOH HOH . 
L 4 HOH B 27 327 61 HOH HOH . 
L 4 HOH B 28 328 65 HOH HOH . 
L 4 HOH B 29 329 66 HOH HOH . 
L 4 HOH B 30 330 68 HOH HOH . 
L 4 HOH B 31 331 69 HOH HOH . 
L 4 HOH B 32 332 70 HOH HOH . 
L 4 HOH B 33 333 71 HOH HOH . 
L 4 HOH B 34 334 72 HOH HOH . 
L 4 HOH B 35 335 73 HOH HOH . 
L 4 HOH B 36 336 77 HOH HOH . 
L 4 HOH B 37 337 78 HOH HOH . 
L 4 HOH B 38 338 80 HOH HOH . 
L 4 HOH B 39 339 81 HOH HOH . 
L 4 HOH B 40 340 82 HOH HOH . 
L 4 HOH B 41 341 83 HOH HOH . 
L 4 HOH B 42 342 84 HOH HOH . 
L 4 HOH B 43 343 86 HOH HOH . 
L 4 HOH B 44 344 89 HOH HOH . 
L 4 HOH B 45 345 91 HOH HOH . 
L 4 HOH B 46 346 92 HOH HOH . 
L 4 HOH B 47 347 93 HOH HOH . 
L 4 HOH B 48 348 94 HOH HOH . 
L 4 HOH B 49 349 96 HOH HOH . 
L 4 HOH B 50 350 97 HOH HOH . 
L 4 HOH B 51 351 98 HOH HOH . 
L 4 HOH B 52 352 99 HOH HOH . 
L 4 HOH B 53 353 100 HOH HOH . 
L 4 HOH B 54 354 101 HOH HOH . 
L 4 HOH B 55 355 103 HOH HOH . 
L 4 HOH B 56 356 105 HOH HOH . 
L 4 HOH B 57 357 106 HOH HOH . 
L 4 HOH B 58 358 107 HOH HOH . 
L 4 HOH B 59 359 108 HOH HOH . 
L 4 HOH B 60 360 109 HOH HOH . 
L 4 HOH B 61 361 110 HOH HOH . 
L 4 HOH B 62 362 111 HOH HOH . 
L 4 HOH B 63 363 112 HOH HOH . 
L 4 HOH B 64 364 114 HOH HOH . 
L 4 HOH B 65 365 120 HOH HOH . 
L 4 HOH B 66 366 121 HOH HOH . 
L 4 HOH B 67 367 122 HOH HOH . 
L 4 HOH B 68 368 126 HOH HOH . 
L 4 HOH B 69 369 127 HOH HOH . 
L 4 HOH B 70 370 130 HOH HOH . 
L 4 HOH B 71 371 131 HOH HOH . 
L 4 HOH B 72 372 134 HOH HOH . 
L 4 HOH B 73 373 136 HOH HOH . 
L 4 HOH B 74 374 137 HOH HOH . 
L 4 HOH B 75 375 141 HOH HOH . 
L 4 HOH B 76 376 143 HOH HOH . 
L 4 HOH B 77 377 145 HOH HOH . 
L 4 HOH B 78 378 146 HOH HOH . 
L 4 HOH B 79 379 147 HOH HOH . 
L 4 HOH B 80 380 150 HOH HOH . 
L 4 HOH B 81 381 154 HOH HOH . 
L 4 HOH B 82 382 155 HOH HOH . 
L 4 HOH B 83 383 158 HOH HOH . 
L 4 HOH B 84 384 163 HOH HOH . 
L 4 HOH B 85 385 165 HOH HOH . 
L 4 HOH B 86 386 167 HOH HOH . 
L 4 HOH B 87 387 169 HOH HOH . 
L 4 HOH B 88 388 171 HOH HOH . 
L 4 HOH B 89 389 172 HOH HOH . 
L 4 HOH B 90 390 177 HOH HOH . 
L 4 HOH B 91 391 180 HOH HOH . 
L 4 HOH B 92 392 181 HOH HOH . 
L 4 HOH B 93 393 185 HOH HOH . 
L 4 HOH B 94 394 186 HOH HOH . 
L 4 HOH B 95 395 187 HOH HOH . 
L 4 HOH B 96 396 188 HOH HOH . 
L 4 HOH B 97 397 193 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               19.077 
_atom_site.Cartn_y               -1.564 
_atom_site.Cartn_z               2.008 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        19.38 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#