data_4H44 # _model_server_result.job_id KYPjqvO5jKyJpJf52w2cxw _model_server_result.datetime_utc '2024-11-15 01:14:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h44 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":102}' # _entry.id 4H44 # _exptl.entry_id 4H44 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.229 _entity.id 19 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4H44 _cell.length_a 159.127 _cell.length_b 159.127 _cell.length_c 364.373 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H44 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -79.5635 137.808024 60.728833 # _struct_asym.details ? _struct_asym.entity_id 19 _struct_asym.id AA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 108 D CYS 108 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 I FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc2 A NE2 HIS 100 A HIS 100 1_555 J FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc3 A NE2 HIS 187 A HIS 187 1_555 I FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc4 A NE2 HIS 202 A HIS 202 1_555 J FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc5 R MG CLA . B CLA 201 1_555 DA O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? metalc ? metalc6 R MG CLA . B CLA 201 1_555 DA O HOH . B HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc7 C N TYR 1 C TYR 1 1_555 T FE HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc8 C NE2 HIS 26 C HIS 26 1_555 T FE HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc9 C NE2 HIS 143 C HIS 143 1_555 W CD CD . C CD 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc10 D SG CYS 108 D CYS 108 1_555 Y FE1 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc11 D ND1 HIS 110 D HIS 110 1_555 Y FE2 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc12 D SG CYS 126 D CYS 126 1_555 Y FE1 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc13 D ND1 HIS 129 D HIS 129 1_555 Y FE2 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 760 n n C1 H11 OCT sing 761 n n C1 H12 OCT sing 762 n n C1 H13 OCT sing 763 n n C2 C3 OCT sing 764 n n C2 H21 OCT sing 765 n n C2 H22 OCT sing 766 n n C3 C4 OCT sing 767 n n C3 H31 OCT sing 768 n n C3 H32 OCT sing 769 n n C4 C5 OCT sing 770 n n C4 H41 OCT sing 771 n n C4 H42 OCT sing 772 n n C5 C6 OCT sing 773 n n C5 H51 OCT sing 774 n n C5 H52 OCT sing 775 n n C6 C7 OCT sing 776 n n C6 H61 OCT sing 777 n n C6 H62 OCT sing 778 n n C7 C8 OCT sing 779 n n C7 H71 OCT sing 780 n n C7 H72 OCT sing 781 n n C8 H81 OCT sing 782 n n C8 H82 OCT sing 783 n n C8 H83 OCT sing 784 n n # _atom_sites.entry_id 4H44 _atom_sites.fract_transf_matrix[1][1] 0.006284 _atom_sites.fract_transf_matrix[1][2] 0.003628 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 HEM A 1 301 301 HEM HEM . J 9 HEM A 1 302 302 HEM HEM . K 9 HEM A 1 303 303 HEM HEM . L 10 UMQ A 1 304 304 UMQ UMQ . M 10 UMQ A 1 305 305 UMQ UMQ . N 11 MYS A 1 306 306 MYS MYS . O 10 UMQ A 1 307 307 UMQ UMQ . P 12 8K6 A 1 308 308 8K6 8K6 . Q 10 UMQ A 1 309 309 UMQ UMQ . R 13 CLA B 1 201 201 CLA CLA . S 14 OPC B 1 202 202 OPC OPC . T 9 HEM C 1 301 301 HEM HEM . U 14 OPC C 1 302 302 OPC OPC . V 15 7PH C 1 303 303 7PH 7PH . W 16 CD C 1 304 304 CD CD . X 17 SQD D 1 201 203 SQD SQD . Y 18 FES D 1 202 200 FES FES . Z 10 UMQ F 1 101 101 UMQ UMQ . AA 19 OCT F 1 102 102 OCT OCT . BA 20 BCR G 1 101 101 BCR BCR . CA 21 HOH A 1 401 401 HOH HOH . CA 21 HOH A 2 402 402 HOH HOH . CA 21 HOH A 3 403 403 HOH HOH . CA 21 HOH A 4 404 404 HOH HOH . CA 21 HOH A 5 405 405 HOH HOH . CA 21 HOH A 6 406 406 HOH HOH . CA 21 HOH A 7 407 407 HOH HOH . CA 21 HOH A 8 408 408 HOH HOH . CA 21 HOH A 9 409 409 HOH HOH . CA 21 HOH A 10 410 410 HOH HOH . CA 21 HOH A 11 411 411 HOH HOH . CA 21 HOH A 12 412 412 HOH HOH . CA 21 HOH A 13 413 413 HOH HOH . CA 21 HOH A 14 414 414 HOH HOH . CA 21 HOH A 15 415 415 HOH HOH . CA 21 HOH A 16 416 416 HOH HOH . CA 21 HOH A 17 417 309 HOH HOH . CA 21 HOH A 18 418 310 HOH HOH . CA 21 HOH A 19 419 1 HOH HOH . CA 21 HOH A 20 420 11 HOH HOH . CA 21 HOH A 21 421 12 HOH HOH . CA 21 HOH A 22 422 17 HOH HOH . CA 21 HOH A 23 423 20 HOH HOH . CA 21 HOH A 24 424 21 HOH HOH . CA 21 HOH A 25 425 30 HOH HOH . CA 21 HOH A 26 426 31 HOH HOH . DA 21 HOH B 1 301 301 HOH HOH . DA 21 HOH B 2 302 302 HOH HOH . DA 21 HOH B 3 303 303 HOH HOH . DA 21 HOH B 4 304 304 HOH HOH . DA 21 HOH B 5 305 305 HOH HOH . DA 21 HOH B 6 306 306 HOH HOH . DA 21 HOH B 7 307 307 HOH HOH . DA 21 HOH B 8 308 308 HOH HOH . DA 21 HOH B 9 309 311 HOH HOH . DA 21 HOH B 10 310 312 HOH HOH . DA 21 HOH B 11 311 313 HOH HOH . DA 21 HOH B 12 312 314 HOH HOH . DA 21 HOH B 13 313 315 HOH HOH . DA 21 HOH B 14 314 316 HOH HOH . DA 21 HOH B 15 315 317 HOH HOH . DA 21 HOH B 16 316 436 HOH HOH . DA 21 HOH B 17 317 3 HOH HOH . DA 21 HOH B 18 318 10 HOH HOH . DA 21 HOH B 19 319 22 HOH HOH . DA 21 HOH B 20 320 28 HOH HOH . DA 21 HOH B 21 321 32 HOH HOH . DA 21 HOH B 22 322 416 HOH HOH . EA 21 HOH C 1 401 401 HOH HOH . EA 21 HOH C 2 402 402 HOH HOH . EA 21 HOH C 3 403 403 HOH HOH . EA 21 HOH C 4 404 404 HOH HOH . EA 21 HOH C 5 405 405 HOH HOH . EA 21 HOH C 6 406 406 HOH HOH . EA 21 HOH C 7 407 407 HOH HOH . EA 21 HOH C 8 408 408 HOH HOH . EA 21 HOH C 9 409 409 HOH HOH . EA 21 HOH C 10 410 410 HOH HOH . EA 21 HOH C 11 411 411 HOH HOH . EA 21 HOH C 12 412 412 HOH HOH . EA 21 HOH C 13 413 413 HOH HOH . EA 21 HOH C 14 414 414 HOH HOH . EA 21 HOH C 15 415 415 HOH HOH . EA 21 HOH C 16 416 417 HOH HOH . EA 21 HOH C 17 417 418 HOH HOH . EA 21 HOH C 18 418 419 HOH HOH . EA 21 HOH C 19 419 420 HOH HOH . EA 21 HOH C 20 420 421 HOH HOH . EA 21 HOH C 21 421 422 HOH HOH . EA 21 HOH C 22 422 423 HOH HOH . EA 21 HOH C 23 423 424 HOH HOH . EA 21 HOH C 24 424 425 HOH HOH . EA 21 HOH C 25 425 426 HOH HOH . EA 21 HOH C 26 426 427 HOH HOH . EA 21 HOH C 27 427 428 HOH HOH . EA 21 HOH C 28 428 429 HOH HOH . EA 21 HOH C 29 429 430 HOH HOH . EA 21 HOH C 30 430 431 HOH HOH . EA 21 HOH C 31 431 432 HOH HOH . EA 21 HOH C 32 432 433 HOH HOH . EA 21 HOH C 33 433 434 HOH HOH . EA 21 HOH C 34 434 435 HOH HOH . EA 21 HOH C 35 435 437 HOH HOH . EA 21 HOH C 36 436 4 HOH HOH . EA 21 HOH C 37 437 5 HOH HOH . EA 21 HOH C 38 438 6 HOH HOH . EA 21 HOH C 39 439 7 HOH HOH . EA 21 HOH C 40 440 8 HOH HOH . EA 21 HOH C 41 441 9 HOH HOH . EA 21 HOH C 42 442 24 HOH HOH . EA 21 HOH C 43 443 25 HOH HOH . EA 21 HOH C 44 444 27 HOH HOH . EA 21 HOH C 45 445 29 HOH HOH . FA 21 HOH D 1 301 26 HOH HOH . GA 21 HOH G 1 201 201 HOH HOH . GA 21 HOH G 2 202 202 HOH HOH . GA 21 HOH G 3 203 2 HOH HOH . GA 21 HOH G 4 204 13 HOH HOH . GA 21 HOH G 5 205 19 HOH HOH . HA 21 HOH H 1 101 14 HOH HOH . HA 21 HOH H 2 102 15 HOH HOH . HA 21 HOH H 3 103 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . AA 19 -30.899 87.314 -8.651 1 71.81 ? C1 OCT 102 F 1 HETATM 2 C C2 OCT . . . AA 19 -31.936 88.227 -8.087 1 67.02 ? C2 OCT 102 F 1 HETATM 3 C C3 OCT . . . AA 19 -33.211 88.113 -8.857 1 82.65 ? C3 OCT 102 F 1 HETATM 4 C C4 OCT . . . AA 19 -33.679 86.697 -8.916 1 75.44 ? C4 OCT 102 F 1 HETATM 5 C C5 OCT . . . AA 19 -35.056 86.66 -9.489 1 63.34 ? C5 OCT 102 F 1 HETATM 6 C C6 OCT . . . AA 19 -35.431 85.255 -9.82 1 61.74 ? C6 OCT 102 F 1 HETATM 7 C C7 OCT . . . AA 19 -36.743 85.243 -10.529 1 75.31 ? C7 OCT 102 F 1 HETATM 8 C C8 OCT . . . AA 19 -36.956 83.914 -11.175 1 61 ? C8 OCT 102 F 1 HETATM 9 H H11 OCT . . . AA 19 -31.214 86.398 -8.602 1 86.17 ? H11 OCT 102 F 1 HETATM 10 H H12 OCT . . . AA 19 -30.079 87.402 -8.14 1 86.17 ? H12 OCT 102 F 1 HETATM 11 H H13 OCT . . . AA 19 -30.73 87.55 -9.576 1 86.17 ? H13 OCT 102 F 1 HETATM 12 H H21 OCT . . . AA 19 -32.096 87.999 -7.158 1 80.42 ? H21 OCT 102 F 1 HETATM 13 H H22 OCT . . . AA 19 -31.61 89.139 -8.146 1 80.42 ? H22 OCT 102 F 1 HETATM 14 H H31 OCT . . . AA 19 -33.894 88.657 -8.436 1 99.18 ? H31 OCT 102 F 1 HETATM 15 H H32 OCT . . . AA 19 -33.07 88.436 -9.76 1 99.18 ? H32 OCT 102 F 1 HETATM 16 H H41 OCT . . . AA 19 -33.079 86.182 -9.479 1 90.53 ? H41 OCT 102 F 1 HETATM 17 H H42 OCT . . . AA 19 -33.69 86.319 -8.023 1 90.53 ? H42 OCT 102 F 1 HETATM 18 H H51 OCT . . . AA 19 -35.685 87.022 -8.845 1 76.01 ? H51 OCT 102 F 1 HETATM 19 H H52 OCT . . . AA 19 -35.079 87.194 -10.298 1 76.01 ? H52 OCT 102 F 1 HETATM 20 H H61 OCT . . . AA 19 -34.754 84.859 -10.39 1 74.09 ? H61 OCT 102 F 1 HETATM 21 H H62 OCT . . . AA 19 -35.5 84.734 -9.005 1 74.09 ? H62 OCT 102 F 1 HETATM 22 H H71 OCT . . . AA 19 -36.745 85.932 -11.211 1 90.37 ? H71 OCT 102 F 1 HETATM 23 H H72 OCT . . . AA 19 -37.457 85.415 -9.895 1 90.37 ? H72 OCT 102 F 1 HETATM 24 H H81 OCT . . . AA 19 -36.952 83.221 -10.496 1 73.19 ? H81 OCT 102 F 1 HETATM 25 H H82 OCT . . . AA 19 -37.811 83.911 -11.634 1 73.19 ? H82 OCT 102 F 1 HETATM 26 H H83 OCT . . . AA 19 -36.245 83.747 -11.813 1 73.19 ? H83 OCT 102 F 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 176 _model_server_stats.query_time_ms 503 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 26 #