data_4H44 # _model_server_result.job_id yCrTW_PEsR2doigPzokd4g _model_server_result.datetime_utc '2024-11-15 01:04:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h44 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":202}' # _entry.id 4H44 # _exptl.entry_id 4H44 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 18 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4H44 _cell.length_a 159.127 _cell.length_b 159.127 _cell.length_c 364.373 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H44 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -79.5635 137.808024 60.728833 # _struct_asym.details ? _struct_asym.entity_id 18 _struct_asym.id Y _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 108 D CYS 108 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 I FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc2 A NE2 HIS 100 A HIS 100 1_555 J FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc3 A NE2 HIS 187 A HIS 187 1_555 I FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc4 A NE2 HIS 202 A HIS 202 1_555 J FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc5 R MG CLA . B CLA 201 1_555 DA O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? metalc ? metalc6 R MG CLA . B CLA 201 1_555 DA O HOH . B HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc7 C N TYR 1 C TYR 1 1_555 T FE HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc8 C NE2 HIS 26 C HIS 26 1_555 T FE HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc9 C NE2 HIS 143 C HIS 143 1_555 W CD CD . C CD 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc10 D SG CYS 108 D CYS 108 1_555 Y FE1 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc11 D ND1 HIS 110 D HIS 110 1_555 Y FE2 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc12 D SG CYS 126 D CYS 126 1_555 Y FE1 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc13 D ND1 HIS 129 D HIS 129 1_555 Y FE2 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 474 n n FE1 S2 FES sing 475 n n FE2 S1 FES sing 476 n n FE2 S2 FES sing 477 n n # _atom_sites.entry_id 4H44 _atom_sites.fract_transf_matrix[1][1] 0.006284 _atom_sites.fract_transf_matrix[1][2] 0.003628 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 HEM A 1 301 301 HEM HEM . J 9 HEM A 1 302 302 HEM HEM . K 9 HEM A 1 303 303 HEM HEM . L 10 UMQ A 1 304 304 UMQ UMQ . M 10 UMQ A 1 305 305 UMQ UMQ . N 11 MYS A 1 306 306 MYS MYS . O 10 UMQ A 1 307 307 UMQ UMQ . P 12 8K6 A 1 308 308 8K6 8K6 . Q 10 UMQ A 1 309 309 UMQ UMQ . R 13 CLA B 1 201 201 CLA CLA . S 14 OPC B 1 202 202 OPC OPC . T 9 HEM C 1 301 301 HEM HEM . U 14 OPC C 1 302 302 OPC OPC . V 15 7PH C 1 303 303 7PH 7PH . W 16 CD C 1 304 304 CD CD . X 17 SQD D 1 201 203 SQD SQD . Y 18 FES D 1 202 200 FES FES . Z 10 UMQ F 1 101 101 UMQ UMQ . AA 19 OCT F 1 102 102 OCT OCT . BA 20 BCR G 1 101 101 BCR BCR . CA 21 HOH A 1 401 401 HOH HOH . CA 21 HOH A 2 402 402 HOH HOH . CA 21 HOH A 3 403 403 HOH HOH . CA 21 HOH A 4 404 404 HOH HOH . CA 21 HOH A 5 405 405 HOH HOH . CA 21 HOH A 6 406 406 HOH HOH . CA 21 HOH A 7 407 407 HOH HOH . CA 21 HOH A 8 408 408 HOH HOH . CA 21 HOH A 9 409 409 HOH HOH . CA 21 HOH A 10 410 410 HOH HOH . CA 21 HOH A 11 411 411 HOH HOH . CA 21 HOH A 12 412 412 HOH HOH . CA 21 HOH A 13 413 413 HOH HOH . CA 21 HOH A 14 414 414 HOH HOH . CA 21 HOH A 15 415 415 HOH HOH . CA 21 HOH A 16 416 416 HOH HOH . CA 21 HOH A 17 417 309 HOH HOH . CA 21 HOH A 18 418 310 HOH HOH . CA 21 HOH A 19 419 1 HOH HOH . CA 21 HOH A 20 420 11 HOH HOH . CA 21 HOH A 21 421 12 HOH HOH . CA 21 HOH A 22 422 17 HOH HOH . CA 21 HOH A 23 423 20 HOH HOH . CA 21 HOH A 24 424 21 HOH HOH . CA 21 HOH A 25 425 30 HOH HOH . CA 21 HOH A 26 426 31 HOH HOH . DA 21 HOH B 1 301 301 HOH HOH . DA 21 HOH B 2 302 302 HOH HOH . DA 21 HOH B 3 303 303 HOH HOH . DA 21 HOH B 4 304 304 HOH HOH . DA 21 HOH B 5 305 305 HOH HOH . DA 21 HOH B 6 306 306 HOH HOH . DA 21 HOH B 7 307 307 HOH HOH . DA 21 HOH B 8 308 308 HOH HOH . DA 21 HOH B 9 309 311 HOH HOH . DA 21 HOH B 10 310 312 HOH HOH . DA 21 HOH B 11 311 313 HOH HOH . DA 21 HOH B 12 312 314 HOH HOH . DA 21 HOH B 13 313 315 HOH HOH . DA 21 HOH B 14 314 316 HOH HOH . DA 21 HOH B 15 315 317 HOH HOH . DA 21 HOH B 16 316 436 HOH HOH . DA 21 HOH B 17 317 3 HOH HOH . DA 21 HOH B 18 318 10 HOH HOH . DA 21 HOH B 19 319 22 HOH HOH . DA 21 HOH B 20 320 28 HOH HOH . DA 21 HOH B 21 321 32 HOH HOH . DA 21 HOH B 22 322 416 HOH HOH . EA 21 HOH C 1 401 401 HOH HOH . EA 21 HOH C 2 402 402 HOH HOH . EA 21 HOH C 3 403 403 HOH HOH . EA 21 HOH C 4 404 404 HOH HOH . EA 21 HOH C 5 405 405 HOH HOH . EA 21 HOH C 6 406 406 HOH HOH . EA 21 HOH C 7 407 407 HOH HOH . EA 21 HOH C 8 408 408 HOH HOH . EA 21 HOH C 9 409 409 HOH HOH . EA 21 HOH C 10 410 410 HOH HOH . EA 21 HOH C 11 411 411 HOH HOH . EA 21 HOH C 12 412 412 HOH HOH . EA 21 HOH C 13 413 413 HOH HOH . EA 21 HOH C 14 414 414 HOH HOH . EA 21 HOH C 15 415 415 HOH HOH . EA 21 HOH C 16 416 417 HOH HOH . EA 21 HOH C 17 417 418 HOH HOH . EA 21 HOH C 18 418 419 HOH HOH . EA 21 HOH C 19 419 420 HOH HOH . EA 21 HOH C 20 420 421 HOH HOH . EA 21 HOH C 21 421 422 HOH HOH . EA 21 HOH C 22 422 423 HOH HOH . EA 21 HOH C 23 423 424 HOH HOH . EA 21 HOH C 24 424 425 HOH HOH . EA 21 HOH C 25 425 426 HOH HOH . EA 21 HOH C 26 426 427 HOH HOH . EA 21 HOH C 27 427 428 HOH HOH . EA 21 HOH C 28 428 429 HOH HOH . EA 21 HOH C 29 429 430 HOH HOH . EA 21 HOH C 30 430 431 HOH HOH . EA 21 HOH C 31 431 432 HOH HOH . EA 21 HOH C 32 432 433 HOH HOH . EA 21 HOH C 33 433 434 HOH HOH . EA 21 HOH C 34 434 435 HOH HOH . EA 21 HOH C 35 435 437 HOH HOH . EA 21 HOH C 36 436 4 HOH HOH . EA 21 HOH C 37 437 5 HOH HOH . EA 21 HOH C 38 438 6 HOH HOH . EA 21 HOH C 39 439 7 HOH HOH . EA 21 HOH C 40 440 8 HOH HOH . EA 21 HOH C 41 441 9 HOH HOH . EA 21 HOH C 42 442 24 HOH HOH . EA 21 HOH C 43 443 25 HOH HOH . EA 21 HOH C 44 444 27 HOH HOH . EA 21 HOH C 45 445 29 HOH HOH . FA 21 HOH D 1 301 26 HOH HOH . GA 21 HOH G 1 201 201 HOH HOH . GA 21 HOH G 2 202 202 HOH HOH . GA 21 HOH G 3 203 2 HOH HOH . GA 21 HOH G 4 204 13 HOH HOH . GA 21 HOH G 5 205 19 HOH HOH . HA 21 HOH H 1 101 14 HOH HOH . HA 21 HOH H 2 102 15 HOH HOH . HA 21 HOH H 3 103 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . Y 18 -71.09 73.294 56.05 1 95.24 ? FE1 FES 202 D 1 HETATM 2 FE FE2 FES . . . Y 18 -68.381 73.798 57.348 1 82.59 ? FE2 FES 202 D 1 HETATM 3 S S1 FES . . . Y 18 -70.387 73.364 58.13 1 81.35 ? S1 FES 202 D 1 HETATM 4 S S2 FES . . . Y 18 -69.01 73.086 55.368 1 79.92 ? S2 FES 202 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #