data_4H4B # _model_server_result.job_id rDGFRS9NFpRUTIkVUorKgw _model_server_result.datetime_utc '2024-11-17 05:20:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 4H4B # _exptl.entry_id 4H4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H4B _cell.length_a 91.11 _cell.length_b 126.83 _cell.length_c 130.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1,2,3,4 A,B,C,D,E,F,G,H,I,J 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 130.4 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 130.4 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 71 A ASP 52 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc2 A O ASP 73 A ASP 54 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc3 A OD1 ASP 370 A ASP 351 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc4 D MG MG . A MG 603 1_555 J O HOH . A HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc5 D MG MG . A MG 603 1_555 J O HOH . A HOH 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc6 D MG MG . A MG 603 1_555 J O HOH . A HOH 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4H4B _atom_sites.fract_transf_matrix[1][1] 0.010976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007885 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 11H A 1 601 900 11H ANT . C 3 GOL A 1 602 702 GOL GOL . D 4 MG A 1 603 701 MG MG . E 5 SO4 A 1 604 800 SO4 SO4 . F 5 SO4 A 1 605 801 SO4 SO4 . G 5 SO4 A 1 606 802 SO4 SO4 . H 5 SO4 A 1 607 803 SO4 SO4 . I 5 SO4 A 1 608 804 SO4 SO4 . J 6 HOH A 1 701 600 HOH HOH . J 6 HOH A 2 702 601 HOH HOH . J 6 HOH A 3 703 602 HOH HOH . J 6 HOH A 4 704 603 HOH HOH . J 6 HOH A 5 705 604 HOH HOH . J 6 HOH A 6 706 605 HOH HOH . J 6 HOH A 7 707 606 HOH HOH . J 6 HOH A 8 708 607 HOH HOH . J 6 HOH A 9 709 608 HOH HOH . J 6 HOH A 10 710 609 HOH HOH . J 6 HOH A 11 711 610 HOH HOH . J 6 HOH A 12 712 611 HOH HOH . J 6 HOH A 13 713 612 HOH HOH . J 6 HOH A 14 714 613 HOH HOH . J 6 HOH A 15 715 614 HOH HOH . J 6 HOH A 16 716 615 HOH HOH . J 6 HOH A 17 717 616 HOH HOH . J 6 HOH A 18 718 617 HOH HOH . J 6 HOH A 19 719 618 HOH HOH . J 6 HOH A 20 720 619 HOH HOH . J 6 HOH A 21 721 620 HOH HOH . J 6 HOH A 22 722 621 HOH HOH . J 6 HOH A 23 723 622 HOH HOH . J 6 HOH A 24 724 623 HOH HOH . J 6 HOH A 25 725 624 HOH HOH . J 6 HOH A 26 726 625 HOH HOH . J 6 HOH A 27 727 626 HOH HOH . J 6 HOH A 28 728 627 HOH HOH . J 6 HOH A 29 729 628 HOH HOH . J 6 HOH A 30 730 629 HOH HOH . J 6 HOH A 31 731 631 HOH HOH . J 6 HOH A 32 732 632 HOH HOH . J 6 HOH A 33 733 633 HOH HOH . J 6 HOH A 34 734 634 HOH HOH . J 6 HOH A 35 735 635 HOH HOH . J 6 HOH A 36 736 636 HOH HOH . J 6 HOH A 37 737 637 HOH HOH . J 6 HOH A 38 738 638 HOH HOH . J 6 HOH A 39 739 639 HOH HOH . J 6 HOH A 40 740 640 HOH HOH . J 6 HOH A 41 741 641 HOH HOH . J 6 HOH A 42 742 642 HOH HOH . J 6 HOH A 43 743 643 HOH HOH . J 6 HOH A 44 744 644 HOH HOH . J 6 HOH A 45 745 645 HOH HOH . J 6 HOH A 46 746 646 HOH HOH . J 6 HOH A 47 747 647 HOH HOH . J 6 HOH A 48 748 648 HOH HOH . J 6 HOH A 49 749 649 HOH HOH . J 6 HOH A 50 750 650 HOH HOH . J 6 HOH A 51 751 651 HOH HOH . J 6 HOH A 52 752 652 HOH HOH . J 6 HOH A 53 753 653 HOH HOH . J 6 HOH A 54 754 654 HOH HOH . J 6 HOH A 55 755 656 HOH HOH . J 6 HOH A 56 756 657 HOH HOH . J 6 HOH A 57 757 658 HOH HOH . J 6 HOH A 58 758 659 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.136 _atom_site.Cartn_y 21.515 _atom_site.Cartn_z 44.128 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 603 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #