data_4H50 # _model_server_result.job_id fV1VfCX3uGrm4EkhcHRFHQ _model_server_result.datetime_utc '2024-10-19 19:39:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":508}' # _entry.id 4H50 # _exptl.entry_id 4H50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4H50 _cell.length_a 98.021 _cell.length_b 98.021 _cell.length_c 171.546 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -49.0105 -84.888676 -28.591 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 224 n n C1 C2 GOL sing 225 n n C1 H11 GOL sing 226 n n C1 H12 GOL sing 227 n n O1 HO1 GOL sing 228 n n C2 O2 GOL sing 229 n n C2 C3 GOL sing 230 n n C2 H2 GOL sing 231 n n O2 HO2 GOL sing 232 n n C3 O3 GOL sing 233 n n C3 H31 GOL sing 234 n n C3 H32 GOL sing 235 n n O3 HO3 GOL sing 236 n n # _atom_sites.entry_id 4H50 _atom_sites.fract_transf_matrix[1][1] 0.010202 _atom_sites.fract_transf_matrix[1][2] 0.00589 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005829 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 501 449 FAD FAD . C 3 NAP A 1 502 500 NAP NAP . D 4 FMT A 1 503 1 FMT FMT . E 4 FMT A 1 504 2 FMT FMT . F 4 FMT A 1 505 3 FMT FMT . G 4 FMT A 1 506 4 FMT FMT . H 4 FMT A 1 507 5 FMT FMT . I 5 GOL A 1 508 1 GOL GOL . J 6 HOH A 1 601 2 HOH HOH . J 6 HOH A 2 602 4 HOH HOH . J 6 HOH A 3 603 5 HOH HOH . J 6 HOH A 4 604 6 HOH HOH . J 6 HOH A 5 605 7 HOH HOH . J 6 HOH A 6 606 8 HOH HOH . J 6 HOH A 7 607 9 HOH HOH . J 6 HOH A 8 608 10 HOH HOH . J 6 HOH A 9 609 12 HOH HOH . J 6 HOH A 10 610 13 HOH HOH . J 6 HOH A 11 611 14 HOH HOH . J 6 HOH A 12 612 15 HOH HOH . J 6 HOH A 13 613 16 HOH HOH . J 6 HOH A 14 614 18 HOH HOH . J 6 HOH A 15 615 19 HOH HOH . J 6 HOH A 16 616 20 HOH HOH . J 6 HOH A 17 617 21 HOH HOH . J 6 HOH A 18 618 22 HOH HOH . J 6 HOH A 19 619 23 HOH HOH . J 6 HOH A 20 620 24 HOH HOH . J 6 HOH A 21 621 25 HOH HOH . J 6 HOH A 22 622 26 HOH HOH . J 6 HOH A 23 623 27 HOH HOH . J 6 HOH A 24 624 28 HOH HOH . J 6 HOH A 25 625 29 HOH HOH . J 6 HOH A 26 626 30 HOH HOH . J 6 HOH A 27 627 31 HOH HOH . J 6 HOH A 28 628 32 HOH HOH . J 6 HOH A 29 629 35 HOH HOH . J 6 HOH A 30 630 36 HOH HOH . J 6 HOH A 31 631 37 HOH HOH . J 6 HOH A 32 632 39 HOH HOH . J 6 HOH A 33 633 40 HOH HOH . J 6 HOH A 34 634 41 HOH HOH . J 6 HOH A 35 635 42 HOH HOH . J 6 HOH A 36 636 43 HOH HOH . J 6 HOH A 37 637 44 HOH HOH . J 6 HOH A 38 638 45 HOH HOH . J 6 HOH A 39 639 46 HOH HOH . J 6 HOH A 40 640 48 HOH HOH . J 6 HOH A 41 641 50 HOH HOH . J 6 HOH A 42 642 51 HOH HOH . J 6 HOH A 43 643 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 5 -26.173 -18.128 -4.89 1 27.98 ? C1 GOL 508 A 1 HETATM 2 O O1 GOL . . . I 5 -25.014 -17.339 -4.789 1 23.91 ? O1 GOL 508 A 1 HETATM 3 C C2 GOL . . . I 5 -26.675 -18.147 -6.333 1 30.43 ? C2 GOL 508 A 1 HETATM 4 O O2 GOL . . . I 5 -26.949 -19.498 -6.676 1 23.2 ? O2 GOL 508 A 1 HETATM 5 C C3 GOL . . . I 5 -27.937 -17.274 -6.42 1 28.65 ? C3 GOL 508 A 1 HETATM 6 O O3 GOL . . . I 5 -28.161 -16.805 -7.738 1 38.32 ? O3 GOL 508 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 364 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 6 #