data_4H5E # _model_server_result.job_id 0pnVguXTJrY7IWutgcHJHQ _model_server_result.datetime_utc '2024-11-05 14:43:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h5e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4H5E # _exptl.entry_id 4H5E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H5E _cell.length_a 111.239 _cell.length_b 111.239 _cell.length_c 65.645 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H5E _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 125 F ASP 103 1_555 D MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 A OD1 ASP 125 F ASP 103 1_555 F MG MG . F MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc3 A OD2 ASP 129 F ASP 107 1_555 D MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 A OD2 ASP 129 F ASP 107 1_555 F MG MG . F MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc5 A OD2 ASP 265 F ASP 243 1_555 E MG MG . F MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc6 B O2 YS4 . F YS4 401 1_555 D MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc7 B O6 YS4 . F YS4 401 1_555 E MG MG . F MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc8 B O3 YS4 . F YS4 401 1_555 E MG MG . F MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc9 B O2 YS4 . F YS4 401 1_555 F MG MG . F MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc10 B O7 YS4 . F YS4 401 1_555 F MG MG . F MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc11 D MG MG . F MG 403 1_555 G O HOH . F HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc12 D MG MG . F MG 403 1_555 G O HOH . F HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc13 D MG MG . F MG 403 1_555 G O HOH . F HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc14 E MG MG . F MG 404 1_555 G O HOH . F HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc15 E MG MG . F MG 404 1_555 G O HOH . F HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc16 E MG MG . F MG 404 1_555 G O HOH . F HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc17 F MG MG . F MG 405 1_555 G O HOH . F HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc18 F MG MG . F MG 405 1_555 G O HOH . F HOH 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4H5E _atom_sites.fract_transf_matrix[1][1] 0.00899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YS4 F 1 401 1 YS4 YS4 . C 3 IPR F 1 402 1 IPR IPR . D 4 MG F 1 403 1 MG MG . E 4 MG F 1 404 1 MG MG . F 4 MG F 1 405 1 MG MG . G 5 HOH F 1 501 1 HOH HOH . G 5 HOH F 2 502 2 HOH HOH . G 5 HOH F 3 503 3 HOH HOH . G 5 HOH F 4 504 4 HOH HOH . G 5 HOH F 5 505 5 HOH HOH . G 5 HOH F 6 506 6 HOH HOH . G 5 HOH F 7 507 7 HOH HOH . G 5 HOH F 8 508 8 HOH HOH . G 5 HOH F 9 509 9 HOH HOH . G 5 HOH F 10 510 10 HOH HOH . G 5 HOH F 11 511 11 HOH HOH . G 5 HOH F 12 512 12 HOH HOH . G 5 HOH F 13 513 13 HOH HOH . G 5 HOH F 14 514 14 HOH HOH . G 5 HOH F 15 515 15 HOH HOH . G 5 HOH F 16 516 16 HOH HOH . G 5 HOH F 17 517 17 HOH HOH . G 5 HOH F 18 518 18 HOH HOH . G 5 HOH F 19 519 19 HOH HOH . G 5 HOH F 20 520 20 HOH HOH . G 5 HOH F 21 521 21 HOH HOH . G 5 HOH F 22 522 22 HOH HOH . G 5 HOH F 23 523 23 HOH HOH . G 5 HOH F 24 524 24 HOH HOH . G 5 HOH F 25 525 25 HOH HOH . G 5 HOH F 26 526 26 HOH HOH . G 5 HOH F 27 527 27 HOH HOH . G 5 HOH F 28 528 28 HOH HOH . G 5 HOH F 29 529 29 HOH HOH . G 5 HOH F 30 530 30 HOH HOH . G 5 HOH F 31 531 31 HOH HOH . G 5 HOH F 32 532 32 HOH HOH . G 5 HOH F 33 533 33 HOH HOH . G 5 HOH F 34 534 34 HOH HOH . G 5 HOH F 35 535 35 HOH HOH . G 5 HOH F 36 536 36 HOH HOH . G 5 HOH F 37 537 37 HOH HOH . G 5 HOH F 38 538 38 HOH HOH . G 5 HOH F 39 539 39 HOH HOH . G 5 HOH F 40 540 40 HOH HOH . G 5 HOH F 41 541 41 HOH HOH . G 5 HOH F 42 542 42 HOH HOH . G 5 HOH F 43 543 43 HOH HOH . G 5 HOH F 44 544 44 HOH HOH . G 5 HOH F 45 545 45 HOH HOH . G 5 HOH F 46 546 46 HOH HOH . G 5 HOH F 47 547 47 HOH HOH . G 5 HOH F 48 548 48 HOH HOH . G 5 HOH F 49 549 49 HOH HOH . G 5 HOH F 50 550 50 HOH HOH . G 5 HOH F 51 551 51 HOH HOH . G 5 HOH F 52 552 52 HOH HOH . G 5 HOH F 53 553 53 HOH HOH . G 5 HOH F 54 554 54 HOH HOH . G 5 HOH F 55 555 55 HOH HOH . G 5 HOH F 56 556 56 HOH HOH . G 5 HOH F 57 557 57 HOH HOH . G 5 HOH F 58 558 58 HOH HOH . G 5 HOH F 59 559 59 HOH HOH . G 5 HOH F 60 560 60 HOH HOH . G 5 HOH F 61 561 61 HOH HOH . G 5 HOH F 62 562 62 HOH HOH . G 5 HOH F 63 563 63 HOH HOH . G 5 HOH F 64 564 64 HOH HOH . G 5 HOH F 65 565 65 HOH HOH . G 5 HOH F 66 566 66 HOH HOH . G 5 HOH F 67 567 67 HOH HOH . G 5 HOH F 68 568 68 HOH HOH . G 5 HOH F 69 569 69 HOH HOH . G 5 HOH F 70 570 70 HOH HOH . G 5 HOH F 71 571 71 HOH HOH . G 5 HOH F 72 572 72 HOH HOH . G 5 HOH F 73 573 73 HOH HOH . G 5 HOH F 74 574 74 HOH HOH . G 5 HOH F 75 575 75 HOH HOH . G 5 HOH F 76 576 76 HOH HOH . G 5 HOH F 77 577 77 HOH HOH . G 5 HOH F 78 578 78 HOH HOH . G 5 HOH F 79 579 79 HOH HOH . G 5 HOH F 80 580 80 HOH HOH . G 5 HOH F 81 581 81 HOH HOH . G 5 HOH F 82 582 82 HOH HOH . G 5 HOH F 83 583 83 HOH HOH . G 5 HOH F 84 584 84 HOH HOH . G 5 HOH F 85 585 85 HOH HOH . G 5 HOH F 86 586 86 HOH HOH . G 5 HOH F 87 587 87 HOH HOH . G 5 HOH F 88 588 88 HOH HOH . G 5 HOH F 89 589 89 HOH HOH . G 5 HOH F 90 590 90 HOH HOH . G 5 HOH F 91 591 91 HOH HOH . G 5 HOH F 92 592 92 HOH HOH . G 5 HOH F 93 593 93 HOH HOH . G 5 HOH F 94 594 94 HOH HOH . G 5 HOH F 95 595 95 HOH HOH . G 5 HOH F 96 596 96 HOH HOH . G 5 HOH F 97 597 97 HOH HOH . G 5 HOH F 98 598 98 HOH HOH . G 5 HOH F 99 599 99 HOH HOH . G 5 HOH F 100 600 100 HOH HOH . G 5 HOH F 101 601 101 HOH HOH . G 5 HOH F 102 602 102 HOH HOH . G 5 HOH F 103 603 103 HOH HOH . G 5 HOH F 104 604 104 HOH HOH . G 5 HOH F 105 605 105 HOH HOH . G 5 HOH F 106 606 106 HOH HOH . G 5 HOH F 107 607 107 HOH HOH . G 5 HOH F 108 608 108 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 19.039 _atom_site.Cartn_y 32.254 _atom_site.Cartn_z -8.966 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #