data_4H6O
#
_model_server_result.job_id            H_MIgc-AleV69I5C-XhrZA 
_model_server_result.datetime_utc      '2024-10-14 15:20:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4h6o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    4H6O 
#
_exptl.entry_id    4H6O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              312.793 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[3-(4-chloro-3,5-dimethylphenoxy)benzyl]-1H-imidazole 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4H6O 
_cell.length_a            63.29 
_cell.length_b            63.29 
_cell.length_c            223.995 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4H6O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 396 A CYS 422 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc2 B FE HEM . A HEM 501 1_555 C NAN NEE . A NEE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
#
_chem_comp.formula           'C18 H17 Cl N2 O' 
_chem_comp.formula_weight    312.793 
_chem_comp.id                NEE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[3-(4-chloro-3,5-dimethylphenoxy)benzyl]-1H-imidazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 CAU NEE sing 319 n n 
CAA CAP NEE sing 320 n n 
CAU CAP NEE doub 321 n y 
CAU CAQ NEE sing 322 n y 
CAP CAJ NEE sing 323 n y 
CAB CAQ NEE sing 324 n n 
CAQ CAK NEE doub 325 n y 
CAI NAN NEE doub 326 n y 
CAI NAV NEE sing 327 n y 
CAJ CAT NEE doub 328 n y 
NAN CAE NEE sing 329 n y 
CAK CAT NEE sing 330 n y 
CAT OAO NEE sing 331 n n 
NAV CAM NEE sing 332 n n 
NAV CAH NEE sing 333 n y 
OAO CAS NEE sing 334 n n 
CAL CAS NEE doub 335 n y 
CAL CAR NEE sing 336 n y 
CAM CAR NEE sing 337 n n 
CAE CAH NEE doub 338 n y 
CAS CAG NEE sing 339 n y 
CAR CAF NEE doub 340 n y 
CAG CAD NEE doub 341 n y 
CAF CAD NEE sing 342 n y 
CAA H1 NEE sing 343 n n 
CAA H2 NEE sing 344 n n 
CAA H3 NEE sing 345 n n 
CAJ H4 NEE sing 346 n n 
CAB H5 NEE sing 347 n n 
CAB H6 NEE sing 348 n n 
CAB H7 NEE sing 349 n n 
CAK H8 NEE sing 350 n n 
CAL H9 NEE sing 351 n n 
CAG H10 NEE sing 352 n n 
CAD H11 NEE sing 353 n n 
CAF H12 NEE sing 354 n n 
CAM H13 NEE sing 355 n n 
CAM H14 NEE sing 356 n n 
CAH H15 NEE sing 357 n n 
CAE H16 NEE sing 358 n n 
CAI H17 NEE sing 359 n n 
#
_atom_sites.entry_id                     4H6O 
_atom_sites.fract_transf_matrix[1][1]    0.0158 
_atom_sites.fract_transf_matrix[1][2]    0.009122 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018245 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004464 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 501 480 HEM HEM . 
C 3 NEE A 1 502 490 NEE NEE . 
D 4 HOH A 1 601 1 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 3 HOH HOH . 
D 4 HOH A 4 604 4 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 6 HOH HOH . 
D 4 HOH A 7 607 7 HOH HOH . 
D 4 HOH A 8 608 8 HOH HOH . 
D 4 HOH A 9 609 9 HOH HOH . 
D 4 HOH A 10 610 10 HOH HOH . 
D 4 HOH A 11 611 11 HOH HOH . 
D 4 HOH A 12 612 12 HOH HOH . 
D 4 HOH A 13 613 13 HOH HOH . 
D 4 HOH A 14 614 14 HOH HOH . 
D 4 HOH A 15 615 15 HOH HOH . 
D 4 HOH A 16 616 16 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 19 HOH HOH . 
D 4 HOH A 20 620 20 HOH HOH . 
D 4 HOH A 21 621 21 HOH HOH . 
D 4 HOH A 22 622 22 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 24 HOH HOH . 
D 4 HOH A 25 625 25 HOH HOH . 
D 4 HOH A 26 626 26 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 28 HOH HOH . 
D 4 HOH A 29 629 29 HOH HOH . 
D 4 HOH A 30 630 30 HOH HOH . 
D 4 HOH A 31 631 31 HOH HOH . 
D 4 HOH A 32 632 32 HOH HOH . 
D 4 HOH A 33 633 33 HOH HOH . 
D 4 HOH A 34 634 34 HOH HOH . 
D 4 HOH A 35 635 35 HOH HOH . 
D 4 HOH A 36 636 36 HOH HOH . 
D 4 HOH A 37 637 37 HOH HOH . 
D 4 HOH A 38 638 38 HOH HOH . 
D 4 HOH A 39 639 39 HOH HOH . 
D 4 HOH A 40 640 40 HOH HOH . 
D 4 HOH A 41 641 41 HOH HOH . 
D 4 HOH A 42 642 42 HOH HOH . 
D 4 HOH A 43 643 43 HOH HOH . 
D 4 HOH A 44 644 44 HOH HOH . 
D 4 HOH A 45 645 45 HOH HOH . 
D 4 HOH A 46 646 46 HOH HOH . 
D 4 HOH A 47 647 47 HOH HOH . 
D 4 HOH A 48 648 48 HOH HOH . 
D 4 HOH A 49 649 49 HOH HOH . 
D 4 HOH A 50 650 50 HOH HOH . 
D 4 HOH A 51 651 51 HOH HOH . 
D 4 HOH A 52 652 52 HOH HOH . 
D 4 HOH A 53 653 53 HOH HOH . 
D 4 HOH A 54 654 54 HOH HOH . 
D 4 HOH A 55 655 55 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA NEE . . . C 3 -3.098 27.636 15.735 1 47.57 ? CAA NEE 502 A 1 
HETATM 2 C CAP NEE . . . C 3 -2.195 28.564 16.248 1 46.41 ? CAP NEE 502 A 1 
HETATM 3 C CAJ NEE . . . C 3 -1.058 28.131 16.92 1 44.92 ? CAJ NEE 502 A 1 
HETATM 4 C CAU NEE . . . C 3 -2.436 29.923 16.095 1 47.21 ? CAU NEE 502 A 1 
HETATM 5 CL CL1 NEE . . . C 3 -3.859 30.432 15.264 1 51.12 ? CL1 NEE 502 A 1 
HETATM 6 C CAQ NEE . . . C 3 -1.54 30.855 16.613 1 46.5 ? CAQ NEE 502 A 1 
HETATM 7 C CAB NEE . . . C 3 -1.769 32.218 16.473 1 47.66 ? CAB NEE 502 A 1 
HETATM 8 C CAK NEE . . . C 3 -0.404 30.419 17.278 1 45.05 ? CAK NEE 502 A 1 
HETATM 9 C CAT NEE . . . C 3 -0.159 29.058 17.441 1 44.51 ? CAT NEE 502 A 1 
HETATM 10 O OAO NEE . . . C 3 0.974 28.665 18.098 1 43.67 ? OAO NEE 502 A 1 
HETATM 11 C CAS NEE . . . C 3 0.928 27.405 18.611 1 45.28 ? CAS NEE 502 A 1 
HETATM 12 C CAL NEE . . . C 3 1.854 26.463 18.176 1 44.03 ? CAL NEE 502 A 1 
HETATM 13 C CAG NEE . . . C 3 -0.007 27.057 19.582 1 49.11 ? CAG NEE 502 A 1 
HETATM 14 C CAD NEE . . . C 3 -0.017 25.763 20.1 1 50.36 ? CAD NEE 502 A 1 
HETATM 15 C CAF NEE . . . C 3 0.903 24.817 19.66 1 47.77 ? CAF NEE 502 A 1 
HETATM 16 C CAR NEE . . . C 3 1.839 25.17 18.692 1 45.25 ? CAR NEE 502 A 1 
HETATM 17 C CAM NEE . . . C 3 2.769 24.244 18.243 1 43.88 ? CAM NEE 502 A 1 
HETATM 18 N NAV NEE . . . C 3 4.042 24.95 17.971 1 42.85 ? NAV NEE 502 A 1 
HETATM 19 C CAH NEE . . . C 3 4.987 25.221 18.874 1 43.97 ? CAH NEE 502 A 1 
HETATM 20 C CAE NEE . . . C 3 5.971 25.871 18.25 1 42.95 ? CAE NEE 502 A 1 
HETATM 21 N NAN NEE . . . C 3 5.635 25.999 16.96 1 41.15 ? NAN NEE 502 A 1 
HETATM 22 C CAI NEE . . . C 3 4.44 25.434 16.79 1 40.78 ? CAI NEE 502 A 1 
#
_model_server_stats.io_time_ms              75 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           22 
#