data_4H6S # _model_server_result.job_id 5juecKzwxekBXEk6_S8-og _model_server_result.datetime_utc '2024-12-27 01:07:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h6s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4H6S # _exptl.entry_id 4H6S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H6S _cell.length_a 63.904 _cell.length_b 70.828 _cell.length_c 56.103 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H6S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 1 1_555 B SG CYS 119 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf2 B SG CYS 28 B CYS 42 1_555 B SG CYS 44 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf3 B SG CYS 173 B CYS 168 1_555 B SG CYS 187 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 B SG CYS 201 B CYS 191 1_555 B SG CYS 231 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc1 B O ARG 233 B ARG 221 1_555 C NA NA . B NA 301 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc2 B O LYS 236 B LYS 224 1_555 C NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc3 C NA NA . B NA 301 1_555 E O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc4 C NA NA . B NA 301 1_555 E O HOH . B HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc5 C NA NA . B NA 301 1_555 E O HOH . B HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc6 C NA NA . B NA 301 1_555 E O HOH . B HOH 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4H6S _atom_sites.fract_transf_matrix[1][1] 0.015648 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA B 1 301 301 NA NA . D 4 HOH A 1 101 2 HOH HOH . D 4 HOH A 2 102 14 HOH HOH . D 4 HOH A 3 103 28 HOH HOH . D 4 HOH A 4 104 32 HOH HOH . D 4 HOH A 5 105 41 HOH HOH . D 4 HOH A 6 106 71 HOH HOH . D 4 HOH A 7 107 98 HOH HOH . D 4 HOH A 8 108 100 HOH HOH . E 4 HOH B 1 401 1 HOH HOH . E 4 HOH B 2 402 3 HOH HOH . E 4 HOH B 3 403 4 HOH HOH . E 4 HOH B 4 404 5 HOH HOH . E 4 HOH B 5 405 6 HOH HOH . E 4 HOH B 6 406 7 HOH HOH . E 4 HOH B 7 407 8 HOH HOH . E 4 HOH B 8 408 9 HOH HOH . E 4 HOH B 9 409 10 HOH HOH . E 4 HOH B 10 410 11 HOH HOH . E 4 HOH B 11 411 12 HOH HOH . E 4 HOH B 12 412 13 HOH HOH . E 4 HOH B 13 413 15 HOH HOH . E 4 HOH B 14 414 16 HOH HOH . E 4 HOH B 15 415 17 HOH HOH . E 4 HOH B 16 416 18 HOH HOH . E 4 HOH B 17 417 19 HOH HOH . E 4 HOH B 18 418 20 HOH HOH . E 4 HOH B 19 419 21 HOH HOH . E 4 HOH B 20 420 22 HOH HOH . E 4 HOH B 21 421 23 HOH HOH . E 4 HOH B 22 422 24 HOH HOH . E 4 HOH B 23 423 25 HOH HOH . E 4 HOH B 24 424 26 HOH HOH . E 4 HOH B 25 425 27 HOH HOH . E 4 HOH B 26 426 29 HOH HOH . E 4 HOH B 27 427 30 HOH HOH . E 4 HOH B 28 428 31 HOH HOH . E 4 HOH B 29 429 33 HOH HOH . E 4 HOH B 30 430 34 HOH HOH . E 4 HOH B 31 431 35 HOH HOH . E 4 HOH B 32 432 36 HOH HOH . E 4 HOH B 33 433 37 HOH HOH . E 4 HOH B 34 434 38 HOH HOH . E 4 HOH B 35 435 39 HOH HOH . E 4 HOH B 36 436 40 HOH HOH . E 4 HOH B 37 437 42 HOH HOH . E 4 HOH B 38 438 43 HOH HOH . E 4 HOH B 39 439 44 HOH HOH . E 4 HOH B 40 440 45 HOH HOH . E 4 HOH B 41 441 46 HOH HOH . E 4 HOH B 42 442 47 HOH HOH . E 4 HOH B 43 443 48 HOH HOH . E 4 HOH B 44 444 49 HOH HOH . E 4 HOH B 45 445 50 HOH HOH . E 4 HOH B 46 446 51 HOH HOH . E 4 HOH B 47 447 52 HOH HOH . E 4 HOH B 48 448 53 HOH HOH . E 4 HOH B 49 449 54 HOH HOH . E 4 HOH B 50 450 55 HOH HOH . E 4 HOH B 51 451 56 HOH HOH . E 4 HOH B 52 452 57 HOH HOH . E 4 HOH B 53 453 58 HOH HOH . E 4 HOH B 54 454 59 HOH HOH . E 4 HOH B 55 455 60 HOH HOH . E 4 HOH B 56 456 61 HOH HOH . E 4 HOH B 57 457 62 HOH HOH . E 4 HOH B 58 458 63 HOH HOH . E 4 HOH B 59 459 64 HOH HOH . E 4 HOH B 60 460 65 HOH HOH . E 4 HOH B 61 461 66 HOH HOH . E 4 HOH B 62 462 67 HOH HOH . E 4 HOH B 63 463 68 HOH HOH . E 4 HOH B 64 464 69 HOH HOH . E 4 HOH B 65 465 70 HOH HOH . E 4 HOH B 66 466 72 HOH HOH . E 4 HOH B 67 467 73 HOH HOH . E 4 HOH B 68 468 74 HOH HOH . E 4 HOH B 69 469 75 HOH HOH . E 4 HOH B 70 470 76 HOH HOH . E 4 HOH B 71 471 77 HOH HOH . E 4 HOH B 72 472 78 HOH HOH . E 4 HOH B 73 473 79 HOH HOH . E 4 HOH B 74 474 80 HOH HOH . E 4 HOH B 75 475 81 HOH HOH . E 4 HOH B 76 476 82 HOH HOH . E 4 HOH B 77 477 83 HOH HOH . E 4 HOH B 78 478 84 HOH HOH . E 4 HOH B 79 479 85 HOH HOH . E 4 HOH B 80 480 86 HOH HOH . E 4 HOH B 81 481 87 HOH HOH . E 4 HOH B 82 482 88 HOH HOH . E 4 HOH B 83 483 89 HOH HOH . E 4 HOH B 84 484 90 HOH HOH . E 4 HOH B 85 485 91 HOH HOH . E 4 HOH B 86 486 92 HOH HOH . E 4 HOH B 87 487 93 HOH HOH . E 4 HOH B 88 488 94 HOH HOH . E 4 HOH B 89 489 95 HOH HOH . E 4 HOH B 90 490 96 HOH HOH . E 4 HOH B 91 491 97 HOH HOH . E 4 HOH B 92 492 99 HOH HOH . E 4 HOH B 93 493 101 HOH HOH . E 4 HOH B 94 494 102 HOH HOH . E 4 HOH B 95 495 103 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.746 _atom_site.Cartn_y 22.989 _atom_site.Cartn_z -33.354 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 382 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #