data_4H6Z # _model_server_result.job_id uLsjjKjzJIzRSuBX-_1W5Q _model_server_result.datetime_utc '2024-11-02 07:27:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4H6Z # _exptl.entry_id 4H6Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H6Z _cell.length_a 81.488 _cell.length_b 81.488 _cell.length_c 117.703 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H6Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 4 A THR -1 1_555 A N MSE 5 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 5 A MSE 1 1_555 A N ASP 6 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C PHE 140 A PHE 136 1_555 A N MSE 141 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 141 A MSE 137 1_555 A N LEU 142 A LEU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C GLN 151 A GLN 147 1_555 A N MSE 152 A MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 152 A MSE 148 1_555 A N ALA 153 A ALA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C THR 4 B THR -1 1_555 B N MSE 5 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 B C MSE 5 B MSE 1 1_555 B N ASP 6 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 B C PHE 140 B PHE 136 1_555 B N MSE 141 B MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 B C MSE 141 B MSE 137 1_555 B N LEU 142 B LEU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C GLN 151 B GLN 147 1_555 B N MSE 152 B MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 B C MSE 152 B MSE 148 1_555 B N ALA 153 B ALA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 4H6Z _atom_sites.fract_transf_matrix[1][1] 0.012272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACO A 1 201 1 ACO ACO . D 3 PO4 A 1 202 3 PO4 PO4 . E 3 PO4 A 1 203 1 PO4 PO4 . F 2 ACO B 1 201 2 ACO ACO . G 4 HOH A 1 301 1 HOH HOH . G 4 HOH A 2 302 2 HOH HOH . G 4 HOH A 3 303 8 HOH HOH . G 4 HOH A 4 304 9 HOH HOH . G 4 HOH A 5 305 11 HOH HOH . H 4 HOH B 1 301 3 HOH HOH . H 4 HOH B 2 302 4 HOH HOH . H 4 HOH B 3 303 5 HOH HOH . H 4 HOH B 4 304 6 HOH HOH . H 4 HOH B 5 305 7 HOH HOH . H 4 HOH B 6 306 10 HOH HOH . H 4 HOH B 7 307 12 HOH HOH . H 4 HOH B 8 308 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . C 2 38.837 -0.441 21.837 1 54.76 ? N1A ACO 201 A 1 HETATM 2 C C2A ACO . . . C 2 38.437 -1.008 20.631 1 51.36 ? C2A ACO 201 A 1 HETATM 3 N N3A ACO . . . C 2 37.27 -1.598 20.333 1 51.84 ? N3A ACO 201 A 1 HETATM 4 C C4A ACO . . . C 2 36.378 -1.628 21.376 1 49.13 ? C4A ACO 201 A 1 HETATM 5 C C5A ACO . . . C 2 36.65 -1.086 22.67 1 51.64 ? C5A ACO 201 A 1 HETATM 6 C C6A ACO . . . C 2 37.933 -0.484 22.865 1 49.03 ? C6A ACO 201 A 1 HETATM 7 N N6A ACO . . . C 2 38.333 0.084 24.073 1 48.91 ? N6A ACO 201 A 1 HETATM 8 N N7A ACO . . . C 2 35.506 -1.289 23.5 1 51.02 ? N7A ACO 201 A 1 HETATM 9 C C8A ACO . . . C 2 34.587 -1.933 22.718 1 49.02 ? C8A ACO 201 A 1 HETATM 10 N N9A ACO . . . C 2 35.096 -2.151 21.415 1 46.89 ? N9A ACO 201 A 1 HETATM 11 C C1B ACO . . . C 2 34.47 -2.819 20.202 1 49.63 ? C1B ACO 201 A 1 HETATM 12 C C2B ACO . . . C 2 35.355 -3.762 19.396 1 50.1 ? C2B ACO 201 A 1 HETATM 13 O O2B ACO . . . C 2 34.927 -3.89 18.091 1 49.49 ? O2B ACO 201 A 1 HETATM 14 C C3B ACO . . . C 2 35.003 -5.12 20.149 1 53.4 ? C3B ACO 201 A 1 HETATM 15 O O3B ACO . . . C 2 35.282 -6.152 19.382 1 57.58 ? O3B ACO 201 A 1 HETATM 16 P P3B ACO . . . C 2 36.518 -7.405 20.013 1 66 ? P3B ACO 201 A 1 HETATM 17 O O7A ACO . . . C 2 36.183 -8.562 19.113 1 65.9 ? O7A ACO 201 A 1 HETATM 18 O O8A ACO . . . C 2 37.765 -6.631 19.706 1 58.27 ? O8A ACO 201 A 1 HETATM 19 O O9A ACO . . . C 2 36.145 -7.533 21.461 1 61.5 ? O9A ACO 201 A 1 HETATM 20 C C4B ACO . . . C 2 33.461 -4.902 20.426 1 49.7 ? C4B ACO 201 A 1 HETATM 21 O O4B ACO . . . C 2 33.29 -3.488 20.585 1 53.82 ? O4B ACO 201 A 1 HETATM 22 C C5B ACO . . . C 2 32.86 -5.673 21.638 1 45.53 ? C5B ACO 201 A 1 HETATM 23 O O5B ACO . . . C 2 31.485 -5.673 21.714 1 44.68 ? O5B ACO 201 A 1 HETATM 24 P P1A ACO . . . C 2 30.718 -5.146 23.136 1 41.64 ? P1A ACO 201 A 1 HETATM 25 O O1A ACO . . . C 2 29.253 -5.357 23.028 1 40.71 ? O1A ACO 201 A 1 HETATM 26 O O2A ACO . . . C 2 31.478 -5.654 24.299 1 46.02 ? O2A ACO 201 A 1 HETATM 27 O O3A ACO . . . C 2 30.914 -3.486 23.078 1 45.51 ? O3A ACO 201 A 1 HETATM 28 P P2A ACO . . . C 2 30.668 -2.616 24.378 1 41.11 ? P2A ACO 201 A 1 HETATM 29 O O4A ACO . . . C 2 29.656 -3.196 25.292 1 46.87 ? O4A ACO 201 A 1 HETATM 30 O O5A ACO . . . C 2 31.887 -1.965 24.901 1 43.14 ? O5A ACO 201 A 1 HETATM 31 O O6A ACO . . . C 2 29.772 -1.151 23.736 1 45.42 ? O6A ACO 201 A 1 HETATM 32 C CBP ACO . . . C 2 30.59 0.99 22.827 1 38.17 ? CBP ACO 201 A 1 HETATM 33 C CCP ACO . . . C 2 30.346 -0.557 22.675 1 41.86 ? CCP ACO 201 A 1 HETATM 34 C CDP ACO . . . C 2 31.344 1.483 21.62 1 37.69 ? CDP ACO 201 A 1 HETATM 35 C CEP ACO . . . C 2 29.268 1.7 22.949 1 39.18 ? CEP ACO 201 A 1 HETATM 36 C CAP ACO . . . C 2 31.423 1.271 24.136 1 37.56 ? CAP ACO 201 A 1 HETATM 37 O OAP ACO . . . C 2 32.762 1.5 23.902 1 40.99 ? OAP ACO 201 A 1 HETATM 38 C C9P ACO . . . C 2 30.908 2.455 25.028 1 38.57 ? C9P ACO 201 A 1 HETATM 39 O O9P ACO . . . C 2 29.876 2.322 25.668 1 43.26 ? O9P ACO 201 A 1 HETATM 40 N N8P ACO . . . C 2 31.538 3.716 25.152 1 38.29 ? N8P ACO 201 A 1 HETATM 41 C C7P ACO . . . C 2 32.778 4.11 24.478 1 41.32 ? C7P ACO 201 A 1 HETATM 42 C C6P ACO . . . C 2 32.833 5.539 23.841 1 45.47 ? C6P ACO 201 A 1 HETATM 43 C C5P ACO . . . C 2 31.515 6.199 23.377 1 45.83 ? C5P ACO 201 A 1 HETATM 44 O O5P ACO . . . C 2 30.911 6.978 24.121 1 49.78 ? O5P ACO 201 A 1 HETATM 45 N N4P ACO . . . C 2 30.979 5.908 22.112 1 47.37 ? N4P ACO 201 A 1 HETATM 46 C C3P ACO . . . C 2 29.723 6.488 21.554 1 44.67 ? C3P ACO 201 A 1 HETATM 47 C C2P ACO . . . C 2 29.629 6.702 20.025 1 36.62 ? C2P ACO 201 A 1 HETATM 48 S S1P ACO . . . C 2 28.791 8.259 19.388 1 54.96 ? S1P ACO 201 A 1 HETATM 49 C C ACO . . . C 2 26.986 7.946 19.393 1 44.25 ? C ACO 201 A 1 HETATM 50 O O ACO . . . C 2 26.433 7.344 20.307 1 43.13 ? O ACO 201 A 1 HETATM 51 C CH3 ACO . . . C 2 26.331 8.049 18.057 1 39.84 ? CH3 ACO 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 51 #