data_4H6Z # _model_server_result.job_id Pgtmj9w-7KyQp-09ZyueLQ _model_server_result.datetime_utc '2024-11-02 07:29:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 4H6Z # _exptl.entry_id 4H6Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H6Z _cell.length_a 81.488 _cell.length_b 81.488 _cell.length_c 117.703 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H6Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 4 A THR -1 1_555 A N MSE 5 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 5 A MSE 1 1_555 A N ASP 6 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C PHE 140 A PHE 136 1_555 A N MSE 141 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 141 A MSE 137 1_555 A N LEU 142 A LEU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C GLN 151 A GLN 147 1_555 A N MSE 152 A MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 152 A MSE 148 1_555 A N ALA 153 A ALA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C THR 4 B THR -1 1_555 B N MSE 5 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 B C MSE 5 B MSE 1 1_555 B N ASP 6 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 B C PHE 140 B PHE 136 1_555 B N MSE 141 B MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 B C MSE 141 B MSE 137 1_555 B N LEU 142 B LEU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C GLN 151 B GLN 147 1_555 B N MSE 152 B MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 B C MSE 152 B MSE 148 1_555 B N ALA 153 B ALA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 4H6Z _atom_sites.fract_transf_matrix[1][1] 0.012272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACO A 1 201 1 ACO ACO . D 3 PO4 A 1 202 3 PO4 PO4 . E 3 PO4 A 1 203 1 PO4 PO4 . F 2 ACO B 1 201 2 ACO ACO . G 4 HOH A 1 301 1 HOH HOH . G 4 HOH A 2 302 2 HOH HOH . G 4 HOH A 3 303 8 HOH HOH . G 4 HOH A 4 304 9 HOH HOH . G 4 HOH A 5 305 11 HOH HOH . H 4 HOH B 1 301 3 HOH HOH . H 4 HOH B 2 302 4 HOH HOH . H 4 HOH B 3 303 5 HOH HOH . H 4 HOH B 4 304 6 HOH HOH . H 4 HOH B 5 305 7 HOH HOH . H 4 HOH B 6 306 10 HOH HOH . H 4 HOH B 7 307 12 HOH HOH . H 4 HOH B 8 308 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . F 2 -10.547 20.517 37.47 1 45.19 ? N1A ACO 201 B 1 HETATM 2 C C2A ACO . . . F 2 -10.128 21.816 37.749 1 45.74 ? C2A ACO 201 B 1 HETATM 3 N N3A ACO . . . F 2 -8.927 22.234 38.181 1 46.42 ? N3A ACO 201 B 1 HETATM 4 C C4A ACO . . . F 2 -8.013 21.217 38.36 1 43.53 ? C4A ACO 201 B 1 HETATM 5 C C5A ACO . . . F 2 -8.299 19.838 38.115 1 42.07 ? C5A ACO 201 B 1 HETATM 6 C C6A ACO . . . F 2 -9.624 19.52 37.656 1 41.58 ? C6A ACO 201 B 1 HETATM 7 N N6A ACO . . . F 2 -10.053 18.222 37.376 1 40.84 ? N6A ACO 201 B 1 HETATM 8 N N7A ACO . . . F 2 -7.124 19.077 38.408 1 46.41 ? N7A ACO 201 B 1 HETATM 9 C C8A ACO . . . F 2 -6.171 19.981 38.815 1 43.97 ? C8A ACO 201 B 1 HETATM 10 N N9A ACO . . . F 2 -6.694 21.296 38.789 1 42.27 ? N9A ACO 201 B 1 HETATM 11 C C1B ACO . . . F 2 -6.086 22.642 39.131 1 46.07 ? C1B ACO 201 B 1 HETATM 12 C C2B ACO . . . F 2 -6.99 23.573 39.937 1 50.44 ? C2B ACO 201 B 1 HETATM 13 O O2B ACO . . . F 2 -6.748 24.91 39.685 1 55.54 ? O2B ACO 201 B 1 HETATM 14 C C3B ACO . . . F 2 -6.357 23.29 41.337 1 52.79 ? C3B ACO 201 B 1 HETATM 15 O O3B ACO . . . F 2 -6.772 24.183 42.181 1 57.97 ? O3B ACO 201 B 1 HETATM 16 P P3B ACO . . . F 2 -8.001 23.529 43.386 1 57.77 ? P3B ACO 201 B 1 HETATM 17 O O7A ACO . . . F 2 -9.249 23.918 42.647 1 44.87 ? O7A ACO 201 B 1 HETATM 18 O O8A ACO . . . F 2 -7.606 22.081 43.344 1 53.98 ? O8A ACO 201 B 1 HETATM 19 O O9A ACO . . . F 2 -7.637 24.299 44.621 1 64.43 ? O9A ACO 201 B 1 HETATM 20 C C4B ACO . . . F 2 -4.863 23.365 40.928 1 46.56 ? C4B ACO 201 B 1 HETATM 21 O O4B ACO . . . F 2 -4.827 22.516 39.783 1 49.44 ? O4B ACO 201 B 1 HETATM 22 C C5B ACO . . . F 2 -3.852 22.933 42.015 1 49.84 ? C5B ACO 201 B 1 HETATM 23 O O5B ACO . . . F 2 -2.722 22.305 41.571 1 46.26 ? O5B ACO 201 B 1 HETATM 24 P P1A ACO . . . F 2 -2.471 20.66 41.906 1 42.06 ? P1A ACO 201 B 1 HETATM 25 O O1A ACO . . . F 2 -1.015 20.363 41.878 1 45.08 ? O1A ACO 201 B 1 HETATM 26 O O2A ACO . . . F 2 -3.299 20.284 43.075 1 52.21 ? O2A ACO 201 B 1 HETATM 27 O O3A ACO . . . F 2 -3.101 19.888 40.555 1 43.74 ? O3A ACO 201 B 1 HETATM 28 P P2A ACO . . . F 2 -2.486 18.512 40.059 1 39.25 ? P2A ACO 201 B 1 HETATM 29 O O4A ACO . . . F 2 -1.515 17.922 41.012 1 42.14 ? O4A ACO 201 B 1 HETATM 30 O O5A ACO . . . F 2 -3.461 17.664 39.338 1 46.31 ? O5A ACO 201 B 1 HETATM 31 O O6A ACO . . . F 2 -1.399 18.969 38.64 1 45.08 ? O6A ACO 201 B 1 HETATM 32 C CBP ACO . . . F 2 -2.034 18.763 36.243 1 40.31 ? CBP ACO 201 B 1 HETATM 33 C CCP ACO . . . F 2 -2.026 19.567 37.608 1 42.44 ? CCP ACO 201 B 1 HETATM 34 C CDP ACO . . . F 2 -2.556 19.679 35.156 1 39.45 ? CDP ACO 201 B 1 HETATM 35 C CEP ACO . . . F 2 -0.64 18.301 35.909 1 39.25 ? CEP ACO 201 B 1 HETATM 36 C CAP ACO . . . F 2 -2.971 17.481 36.364 1 42.54 ? CAP ACO 201 B 1 HETATM 37 O OAP ACO . . . F 2 -4.287 17.722 36.005 1 43.95 ? OAP ACO 201 B 1 HETATM 38 C C9P ACO . . . F 2 -2.505 16.204 35.557 1 45.52 ? C9P ACO 201 B 1 HETATM 39 O O9P ACO . . . F 2 -1.441 15.668 35.836 1 48.02 ? O9P ACO 201 B 1 HETATM 40 N N8P ACO . . . F 2 -3.226 15.602 34.483 1 43.21 ? N8P ACO 201 B 1 HETATM 41 C C7P ACO . . . F 2 -4.517 16.074 33.982 1 43.89 ? C7P ACO 201 B 1 HETATM 42 C C6P ACO . . . F 2 -4.779 16.017 32.445 1 48.42 ? C6P ACO 201 B 1 HETATM 43 C C5P ACO . . . F 2 -3.787 16.688 31.474 1 47.79 ? C5P ACO 201 B 1 HETATM 44 O O5P ACO . . . F 2 -4.232 17.27 30.486 1 50.71 ? O5P ACO 201 B 1 HETATM 45 N N4P ACO . . . F 2 -2.381 16.68 31.676 1 44.31 ? N4P ACO 201 B 1 HETATM 46 C C3P ACO . . . F 2 -1.412 17.335 30.715 1 42.4 ? C3P ACO 201 B 1 HETATM 47 C C2P ACO . . . F 2 -1.474 18.858 30.415 1 37.65 ? C2P ACO 201 B 1 HETATM 48 S S1P ACO . . . F 2 -1.125 19.457 28.63 1 42.09 ? S1P ACO 201 B 1 HETATM 49 C C ACO . . . F 2 0.659 19.867 28.519 1 38.88 ? C ACO 201 B 1 HETATM 50 O O ACO . . . F 2 1.51 19.213 29.11 1 39.78 ? O ACO 201 B 1 HETATM 51 C CH3 ACO . . . F 2 0.963 21.254 28.054 1 31.95 ? CH3 ACO 201 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 51 #