data_4H7I
#
_model_server_result.job_id            meY55-yo5EfrCMmwq5F1LQ 
_model_server_result.datetime_utc      '2024-11-24 17:20:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4h7i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    4H7I 
#
_exptl.entry_id    4H7I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4H7I 
_cell.length_a            50.421 
_cell.length_b            72.289 
_cell.length_c            73.919 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4H7I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O PRO 175 A PRO 175 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc2 A O ILE 178 A ILE 178 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc3 B CA CA . A CA 401 1_555 G O HOH . A HOH 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
metalc ? metalc4 B CA CA . A CA 401 1_555 G O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4H7I 
_atom_sites.fract_transf_matrix[1][1]    0.019833 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013833 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013528 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 401 1 CA CA . 
C 3 CL A 1 402 1 CL CL . 
D 3 CL A 1 403 1 CL CL . 
E 4 GOL A 1 404 501 GOL GOL . 
F 4 GOL A 1 405 502 GOL GOL . 
G 5 HOH A 1 501 1 HOH HOH . 
G 5 HOH A 2 502 2 HOH HOH . 
G 5 HOH A 3 503 3 HOH HOH . 
G 5 HOH A 4 504 4 HOH HOH . 
G 5 HOH A 5 505 5 HOH HOH . 
G 5 HOH A 6 506 6 HOH HOH . 
G 5 HOH A 7 507 7 HOH HOH . 
G 5 HOH A 8 508 8 HOH HOH . 
G 5 HOH A 9 509 9 HOH HOH . 
G 5 HOH A 10 510 10 HOH HOH . 
G 5 HOH A 11 511 11 HOH HOH . 
G 5 HOH A 12 512 12 HOH HOH . 
G 5 HOH A 13 513 13 HOH HOH . 
G 5 HOH A 14 514 14 HOH HOH . 
G 5 HOH A 15 515 15 HOH HOH . 
G 5 HOH A 16 516 16 HOH HOH . 
G 5 HOH A 17 517 17 HOH HOH . 
G 5 HOH A 18 518 18 HOH HOH . 
G 5 HOH A 19 519 19 HOH HOH . 
G 5 HOH A 20 520 20 HOH HOH . 
G 5 HOH A 21 521 21 HOH HOH . 
G 5 HOH A 22 522 22 HOH HOH . 
G 5 HOH A 23 523 23 HOH HOH . 
G 5 HOH A 24 524 24 HOH HOH . 
G 5 HOH A 25 525 25 HOH HOH . 
G 5 HOH A 26 526 26 HOH HOH . 
G 5 HOH A 27 527 27 HOH HOH . 
G 5 HOH A 28 528 28 HOH HOH . 
G 5 HOH A 29 529 29 HOH HOH . 
G 5 HOH A 30 530 30 HOH HOH . 
G 5 HOH A 31 531 31 HOH HOH . 
G 5 HOH A 32 532 32 HOH HOH . 
G 5 HOH A 33 533 33 HOH HOH . 
G 5 HOH A 34 534 34 HOH HOH . 
G 5 HOH A 35 535 35 HOH HOH . 
G 5 HOH A 36 536 36 HOH HOH . 
G 5 HOH A 37 537 37 HOH HOH . 
G 5 HOH A 38 538 38 HOH HOH . 
G 5 HOH A 39 539 39 HOH HOH . 
G 5 HOH A 40 540 40 HOH HOH . 
G 5 HOH A 41 541 41 HOH HOH . 
G 5 HOH A 42 542 42 HOH HOH . 
G 5 HOH A 43 543 43 HOH HOH . 
G 5 HOH A 44 544 44 HOH HOH . 
G 5 HOH A 45 545 45 HOH HOH . 
G 5 HOH A 46 546 46 HOH HOH . 
G 5 HOH A 47 547 47 HOH HOH . 
G 5 HOH A 48 548 48 HOH HOH . 
G 5 HOH A 49 549 49 HOH HOH . 
G 5 HOH A 50 550 50 HOH HOH . 
G 5 HOH A 51 551 51 HOH HOH . 
G 5 HOH A 52 552 52 HOH HOH . 
G 5 HOH A 53 553 53 HOH HOH . 
G 5 HOH A 54 554 54 HOH HOH . 
G 5 HOH A 55 555 55 HOH HOH . 
G 5 HOH A 56 556 56 HOH HOH . 
G 5 HOH A 57 557 57 HOH HOH . 
G 5 HOH A 58 558 58 HOH HOH . 
G 5 HOH A 59 559 59 HOH HOH . 
G 5 HOH A 60 560 60 HOH HOH . 
G 5 HOH A 61 561 61 HOH HOH . 
G 5 HOH A 62 562 62 HOH HOH . 
G 5 HOH A 63 563 63 HOH HOH . 
G 5 HOH A 64 564 64 HOH HOH . 
G 5 HOH A 65 565 65 HOH HOH . 
G 5 HOH A 66 566 66 HOH HOH . 
G 5 HOH A 67 567 67 HOH HOH . 
G 5 HOH A 68 568 68 HOH HOH . 
G 5 HOH A 69 569 69 HOH HOH . 
G 5 HOH A 70 570 70 HOH HOH . 
G 5 HOH A 71 571 71 HOH HOH . 
G 5 HOH A 72 572 72 HOH HOH . 
G 5 HOH A 73 573 73 HOH HOH . 
G 5 HOH A 74 574 74 HOH HOH . 
G 5 HOH A 75 575 75 HOH HOH . 
G 5 HOH A 76 576 76 HOH HOH . 
G 5 HOH A 77 577 77 HOH HOH . 
G 5 HOH A 78 578 78 HOH HOH . 
G 5 HOH A 79 579 79 HOH HOH . 
G 5 HOH A 80 580 80 HOH HOH . 
G 5 HOH A 81 581 81 HOH HOH . 
G 5 HOH A 82 582 82 HOH HOH . 
G 5 HOH A 83 583 83 HOH HOH . 
G 5 HOH A 84 584 84 HOH HOH . 
G 5 HOH A 85 585 85 HOH HOH . 
G 5 HOH A 86 586 86 HOH HOH . 
G 5 HOH A 87 587 87 HOH HOH . 
G 5 HOH A 88 588 88 HOH HOH . 
G 5 HOH A 89 589 89 HOH HOH . 
G 5 HOH A 90 590 91 HOH HOH . 
G 5 HOH A 91 591 92 HOH HOH . 
G 5 HOH A 92 592 93 HOH HOH . 
G 5 HOH A 93 593 94 HOH HOH . 
G 5 HOH A 94 594 95 HOH HOH . 
G 5 HOH A 95 595 96 HOH HOH . 
G 5 HOH A 96 596 97 HOH HOH . 
G 5 HOH A 97 597 98 HOH HOH . 
G 5 HOH A 98 598 99 HOH HOH . 
G 5 HOH A 99 599 100 HOH HOH . 
G 5 HOH A 100 600 101 HOH HOH . 
G 5 HOH A 101 601 102 HOH HOH . 
G 5 HOH A 102 602 103 HOH HOH . 
G 5 HOH A 103 603 104 HOH HOH . 
G 5 HOH A 104 604 105 HOH HOH . 
G 5 HOH A 105 605 106 HOH HOH . 
G 5 HOH A 106 606 107 HOH HOH . 
G 5 HOH A 107 607 108 HOH HOH . 
G 5 HOH A 108 608 109 HOH HOH . 
G 5 HOH A 109 609 110 HOH HOH . 
G 5 HOH A 110 610 111 HOH HOH . 
G 5 HOH A 111 611 112 HOH HOH . 
G 5 HOH A 112 612 113 HOH HOH . 
G 5 HOH A 113 613 114 HOH HOH . 
G 5 HOH A 114 614 115 HOH HOH . 
G 5 HOH A 115 615 116 HOH HOH . 
G 5 HOH A 116 616 117 HOH HOH . 
G 5 HOH A 117 617 118 HOH HOH . 
G 5 HOH A 118 618 119 HOH HOH . 
G 5 HOH A 119 619 120 HOH HOH . 
G 5 HOH A 120 620 121 HOH HOH . 
G 5 HOH A 121 621 122 HOH HOH . 
G 5 HOH A 122 622 123 HOH HOH . 
G 5 HOH A 123 623 124 HOH HOH . 
G 5 HOH A 124 624 125 HOH HOH . 
G 5 HOH A 125 625 126 HOH HOH . 
G 5 HOH A 126 626 127 HOH HOH . 
G 5 HOH A 127 627 128 HOH HOH . 
G 5 HOH A 128 628 129 HOH HOH . 
G 5 HOH A 129 629 130 HOH HOH . 
G 5 HOH A 130 630 131 HOH HOH . 
G 5 HOH A 131 631 132 HOH HOH . 
G 5 HOH A 132 632 133 HOH HOH . 
G 5 HOH A 133 633 134 HOH HOH . 
G 5 HOH A 134 634 135 HOH HOH . 
G 5 HOH A 135 635 136 HOH HOH . 
G 5 HOH A 136 636 137 HOH HOH . 
G 5 HOH A 137 637 138 HOH HOH . 
G 5 HOH A 138 638 139 HOH HOH . 
G 5 HOH A 139 639 140 HOH HOH . 
G 5 HOH A 140 640 142 HOH HOH . 
G 5 HOH A 141 641 143 HOH HOH . 
G 5 HOH A 142 642 144 HOH HOH . 
G 5 HOH A 143 643 145 HOH HOH . 
G 5 HOH A 144 644 146 HOH HOH . 
G 5 HOH A 145 645 147 HOH HOH . 
G 5 HOH A 146 646 148 HOH HOH . 
G 5 HOH A 147 647 149 HOH HOH . 
G 5 HOH A 148 648 150 HOH HOH . 
G 5 HOH A 149 649 151 HOH HOH . 
G 5 HOH A 150 650 152 HOH HOH . 
G 5 HOH A 151 651 153 HOH HOH . 
G 5 HOH A 152 652 154 HOH HOH . 
G 5 HOH A 153 653 155 HOH HOH . 
G 5 HOH A 154 654 156 HOH HOH . 
G 5 HOH A 155 655 158 HOH HOH . 
G 5 HOH A 156 656 159 HOH HOH . 
G 5 HOH A 157 657 160 HOH HOH . 
G 5 HOH A 158 658 161 HOH HOH . 
G 5 HOH A 159 659 162 HOH HOH . 
G 5 HOH A 160 660 163 HOH HOH . 
G 5 HOH A 161 661 164 HOH HOH . 
G 5 HOH A 162 662 166 HOH HOH . 
G 5 HOH A 163 663 167 HOH HOH . 
G 5 HOH A 164 664 168 HOH HOH . 
G 5 HOH A 165 665 169 HOH HOH . 
G 5 HOH A 166 666 171 HOH HOH . 
G 5 HOH A 167 667 172 HOH HOH . 
G 5 HOH A 168 668 173 HOH HOH . 
G 5 HOH A 169 669 174 HOH HOH . 
G 5 HOH A 170 670 175 HOH HOH . 
G 5 HOH A 171 671 176 HOH HOH . 
G 5 HOH A 172 672 178 HOH HOH . 
G 5 HOH A 173 673 181 HOH HOH . 
G 5 HOH A 174 674 182 HOH HOH . 
G 5 HOH A 175 675 183 HOH HOH . 
G 5 HOH A 176 676 186 HOH HOH . 
G 5 HOH A 177 677 187 HOH HOH . 
G 5 HOH A 178 678 189 HOH HOH . 
G 5 HOH A 179 679 191 HOH HOH . 
G 5 HOH A 180 680 193 HOH HOH . 
G 5 HOH A 181 681 194 HOH HOH . 
G 5 HOH A 182 682 195 HOH HOH . 
G 5 HOH A 183 683 197 HOH HOH . 
G 5 HOH A 184 684 198 HOH HOH . 
G 5 HOH A 185 685 203 HOH HOH . 
G 5 HOH A 186 686 204 HOH HOH . 
G 5 HOH A 187 687 205 HOH HOH . 
G 5 HOH A 188 688 206 HOH HOH . 
G 5 HOH A 189 689 207 HOH HOH . 
G 5 HOH A 190 690 209 HOH HOH . 
G 5 HOH A 191 691 210 HOH HOH . 
G 5 HOH A 192 692 212 HOH HOH . 
G 5 HOH A 193 693 215 HOH HOH . 
G 5 HOH A 194 694 216 HOH HOH . 
G 5 HOH A 195 695 217 HOH HOH . 
G 5 HOH A 196 696 220 HOH HOH . 
G 5 HOH A 197 697 221 HOH HOH . 
G 5 HOH A 198 698 226 HOH HOH . 
G 5 HOH A 199 699 230 HOH HOH . 
G 5 HOH A 200 700 231 HOH HOH . 
G 5 HOH A 201 701 242 HOH HOH . 
G 5 HOH A 202 702 243 HOH HOH . 
G 5 HOH A 203 703 244 HOH HOH . 
G 5 HOH A 204 704 246 HOH HOH . 
G 5 HOH A 205 705 248 HOH HOH . 
G 5 HOH A 206 706 276 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 30.632 24.75 17.758 1 21.81 ? C1 GOL 404 A 1 
HETATM 2 O O1 GOL . . . E 4 30.691 23.493 17.079 1 21.62 ? O1 GOL 404 A 1 
HETATM 3 C C2 GOL . . . E 4 31.74 25.646 17.23 1 23.29 ? C2 GOL 404 A 1 
HETATM 4 O O2 GOL . . . E 4 32.998 25.083 17.614 1 23.41 ? O2 GOL 404 A 1 
HETATM 5 C C3 GOL . . . E 4 31.573 27.032 17.837 1 23.65 ? C3 GOL 404 A 1 
HETATM 6 O O3 GOL . . . E 4 32.682 27.854 17.464 1 26.01 ? O3 GOL 404 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           231 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#