data_4H95 # _model_server_result.job_id ceMqR72NuPlEme_P0ydgwg _model_server_result.datetime_utc '2024-11-06 02:53:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h95 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4H95 # _exptl.entry_id 4H95 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H95 _cell.length_a 118.482 _cell.length_b 118.856 _cell.length_c 39.284 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H95 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 277 n n PA O2A NDP sing 278 n n PA O5B NDP sing 279 n n PA O3 NDP sing 280 n n O2A HOA2 NDP sing 281 n n O5B C5B NDP sing 282 n n C5B C4B NDP sing 283 n n C5B H51A NDP sing 284 n n C5B H52A NDP sing 285 n n C4B O4B NDP sing 286 n n C4B C3B NDP sing 287 n n C4B H4B NDP sing 288 n n O4B C1B NDP sing 289 n n C3B O3B NDP sing 290 n n C3B C2B NDP sing 291 n n C3B H3B NDP sing 292 n n O3B HO3A NDP sing 293 n n C2B O2B NDP sing 294 n n C2B C1B NDP sing 295 n n C2B H2B NDP sing 296 n n O2B P2B NDP sing 297 n n C1B N9A NDP sing 298 n n C1B H1B NDP sing 299 n n N9A C8A NDP sing 300 n y N9A C4A NDP sing 301 n y C8A N7A NDP doub 302 n y C8A H8A NDP sing 303 n n N7A C5A NDP sing 304 n y C5A C6A NDP sing 305 n y C5A C4A NDP doub 306 n y C6A N6A NDP sing 307 n n C6A N1A NDP doub 308 n y N6A H61A NDP sing 309 n n N6A H62A NDP sing 310 n n N1A C2A NDP sing 311 n y C2A N3A NDP doub 312 n y C2A H2A NDP sing 313 n n N3A C4A NDP sing 314 n y O3 PN NDP sing 315 n n PN O1N NDP doub 316 n n PN O2N NDP sing 317 n n PN O5D NDP sing 318 n n O2N H21N NDP sing 319 n n O5D C5D NDP sing 320 n n C5D C4D NDP sing 321 n n C5D H51N NDP sing 322 n n C5D H52N NDP sing 323 n n C4D O4D NDP sing 324 n n C4D C3D NDP sing 325 n n C4D H4D NDP sing 326 n n O4D C1D NDP sing 327 n n C3D O3D NDP sing 328 n n C3D C2D NDP sing 329 n n C3D H3D NDP sing 330 n n O3D HO3N NDP sing 331 n n C2D O2D NDP sing 332 n n C2D C1D NDP sing 333 n n C2D H2D NDP sing 334 n n O2D HO2N NDP sing 335 n n C1D N1N NDP sing 336 n n C1D H1D NDP sing 337 n n N1N C2N NDP sing 338 n n N1N C6N NDP sing 339 n n C2N C3N NDP doub 340 n n C2N H2N NDP sing 341 n n C3N C7N NDP sing 342 n n C3N C4N NDP sing 343 n n C7N O7N NDP doub 344 n n C7N N7N NDP sing 345 n n N7N H71N NDP sing 346 n n N7N H72N NDP sing 347 n n C4N C5N NDP sing 348 n n C4N H41N NDP sing 349 n n C4N H42N NDP sing 350 n n C5N C6N NDP doub 351 n n C5N H5N NDP sing 352 n n C6N H6N NDP sing 353 n n P2B O1X NDP doub 354 n n P2B O2X NDP sing 355 n n P2B O3X NDP sing 356 n n O2X HOP2 NDP sing 357 n n O3X HOP3 NDP sing 358 n n # _atom_sites.entry_id 4H95 _atom_sites.fract_transf_matrix[1][1] 0.00844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008414 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025456 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 201 193 NDP NAP . D 3 06U A 1 202 194 06U 06U . E 2 NDP B 1 201 193 NDP NAP . F 3 06U B 1 202 194 06U 06U . G 4 HOH A 1 301 5 HOH HOH . G 4 HOH A 2 302 6 HOH HOH . G 4 HOH A 3 303 13 HOH HOH . G 4 HOH A 4 304 49 HOH HOH . H 4 HOH B 1 301 7 HOH HOH . H 4 HOH B 2 302 14 HOH HOH . H 4 HOH B 3 303 24 HOH HOH . H 4 HOH B 4 304 26 HOH HOH . H 4 HOH B 5 305 46 HOH HOH . H 4 HOH B 6 306 47 HOH HOH . H 4 HOH B 7 307 51 HOH HOH . H 4 HOH B 8 308 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 -9.82 20.158 -9.107 1 52.9 ? PA NDP 201 A 1 HETATM 2 O O1A NDP . . . C 2 -11.029 20.976 -9.344 1 52.4 ? O1A NDP 201 A 1 HETATM 3 O O2A NDP . . . C 2 -10.139 18.975 -8.28 1 52.65 ? O2A NDP 201 A 1 HETATM 4 O O5B NDP . . . C 2 -9.12 19.697 -10.481 1 52.54 ? O5B NDP 201 A 1 HETATM 5 C C5B NDP . . . C 2 -9.441 20.283 -11.722 1 52.5 ? C5B NDP 201 A 1 HETATM 6 C C4B NDP . . . C 2 -9.288 19.213 -12.791 1 52.31 ? C4B NDP 201 A 1 HETATM 7 O O4B NDP . . . C 2 -10.491 18.48 -12.935 1 51.93 ? O4B NDP 201 A 1 HETATM 8 C C3B NDP . . . C 2 -8.969 19.792 -14.157 1 52.42 ? C3B NDP 201 A 1 HETATM 9 O O3B NDP . . . C 2 -7.578 19.85 -14.366 1 52.72 ? O3B NDP 201 A 1 HETATM 10 C C2B NDP . . . C 2 -9.632 18.819 -15.107 1 52.43 ? C2B NDP 201 A 1 HETATM 11 O O2B NDP . . . C 2 -8.747 17.756 -15.381 1 52.43 ? O2B NDP 201 A 1 HETATM 12 C C1B NDP . . . C 2 -10.787 18.246 -14.3 1 52.21 ? C1B NDP 201 A 1 HETATM 13 N N9A NDP . . . C 2 -12.072 18.896 -14.634 1 52.47 ? N9A NDP 201 A 1 HETATM 14 C C8A NDP . . . C 2 -12.468 20.159 -14.269 1 52.63 ? C8A NDP 201 A 1 HETATM 15 N N7A NDP . . . C 2 -13.707 20.388 -14.752 1 52.49 ? N7A NDP 201 A 1 HETATM 16 C C5A NDP . . . C 2 -14.12 19.29 -15.419 1 52.68 ? C5A NDP 201 A 1 HETATM 17 C C6A NDP . . . C 2 -15.301 18.993 -16.102 1 52.77 ? C6A NDP 201 A 1 HETATM 18 N N6A NDP . . . C 2 -16.279 19.891 -16.174 1 52.2 ? N6A NDP 201 A 1 HETATM 19 N N1A NDP . . . C 2 -15.449 17.756 -16.707 1 53.13 ? N1A NDP 201 A 1 HETATM 20 C C2A NDP . . . C 2 -14.427 16.825 -16.63 1 52.86 ? C2A NDP 201 A 1 HETATM 21 N N3A NDP . . . C 2 -13.26 17.131 -15.951 1 53.04 ? N3A NDP 201 A 1 HETATM 22 C C4A NDP . . . C 2 -13.104 18.341 -15.352 1 52.68 ? C4A NDP 201 A 1 HETATM 23 O O3 NDP . . . C 2 -8.677 21.042 -8.405 1 53.5 ? O3 NDP 201 A 1 HETATM 24 P PN NDP . . . C 2 -8.493 22.626 -8.217 1 54.22 ? PN NDP 201 A 1 HETATM 25 O O1N NDP . . . C 2 -7.045 22.913 -8.317 1 54.2 ? O1N NDP 201 A 1 HETATM 26 O O2N NDP . . . C 2 -9.443 23.34 -9.094 1 54.38 ? O2N NDP 201 A 1 HETATM 27 O O5D NDP . . . C 2 -8.967 22.846 -6.691 1 55.42 ? O5D NDP 201 A 1 HETATM 28 C C5D NDP . . . C 2 -8.273 22.239 -5.62 1 57.71 ? C5D NDP 201 A 1 HETATM 29 C C4D NDP . . . C 2 -8.244 23.181 -4.419 1 59.08 ? C4D NDP 201 A 1 HETATM 30 O O4D NDP . . . C 2 -9.471 23.107 -3.718 1 60.05 ? O4D NDP 201 A 1 HETATM 31 C C3D NDP . . . C 2 -7.137 22.826 -3.438 1 59.66 ? C3D NDP 201 A 1 HETATM 32 O O3D NDP . . . C 2 -6.387 23.986 -3.156 1 59.73 ? O3D NDP 201 A 1 HETATM 33 C C2D NDP . . . C 2 -7.839 22.346 -2.184 1 60.29 ? C2D NDP 201 A 1 HETATM 34 O O2D NDP . . . C 2 -7.262 22.897 -1.021 1 60.35 ? O2D NDP 201 A 1 HETATM 35 C C1D NDP . . . C 2 -9.268 22.843 -2.34 1 60.72 ? C1D NDP 201 A 1 HETATM 36 N N1N NDP . . . C 2 -10.256 21.87 -1.824 1 61.48 ? N1N NDP 201 A 1 HETATM 37 C C2N NDP . . . C 2 -10.989 22.204 -0.713 1 61.73 ? C2N NDP 201 A 1 HETATM 38 C C3N NDP . . . C 2 -11.936 21.322 -0.19 1 61.98 ? C3N NDP 201 A 1 HETATM 39 C C7N NDP . . . C 2 -12.771 21.714 1.001 1 62.36 ? C7N NDP 201 A 1 HETATM 40 O O7N NDP . . . C 2 -13.93 20.975 1.31 1 62.78 ? O7N NDP 201 A 1 HETATM 41 N N7N NDP . . . C 2 -12.406 22.757 1.747 1 62.49 ? N7N NDP 201 A 1 HETATM 42 C C4N NDP . . . C 2 -12.134 20.089 -0.813 1 62.08 ? C4N NDP 201 A 1 HETATM 43 C C5N NDP . . . C 2 -11.388 19.752 -1.944 1 62.06 ? C5N NDP 201 A 1 HETATM 44 C C6N NDP . . . C 2 -10.448 20.655 -2.444 1 61.93 ? C6N NDP 201 A 1 HETATM 45 P P2B NDP . . . C 2 -7.897 17.619 -16.743 1 52.58 ? P2B NDP 201 A 1 HETATM 46 O O1X NDP . . . C 2 -7.274 16.244 -16.743 1 52.03 ? O1X NDP 201 A 1 HETATM 47 O O2X NDP . . . C 2 -8.788 17.769 -17.955 1 52.32 ? O2X NDP 201 A 1 HETATM 48 O O3X NDP . . . C 2 -6.81 18.667 -16.774 1 52.43 ? O3X NDP 201 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 385 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 48 #