data_4H96 # _model_server_result.job_id 3AzqeWjoAb5sAM0rhgqMmg _model_server_result.datetime_utc '2024-11-23 21:34:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 4H96 # _exptl.entry_id 4H96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.446 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-{3-[3-(1,3-benzodioxol-5-yl)-5-methoxyphenyl]prop-1-yn-1-yl}-6-ethylpyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4H96 _cell.length_a 118.665 _cell.length_b 118.665 _cell.length_c 39.331 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C23 H22 N4 O3' _chem_comp.formula_weight 402.446 _chem_comp.id 14Q _chem_comp.mon_nstd_flag . _chem_comp.name 5-{3-[3-(1,3-benzodioxol-5-yl)-5-methoxyphenyl]prop-1-yn-1-yl}-6-ethylpyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAL CAM 14Q sing 1 n n CAL CAK 14Q sing 2 n n NAI C6 14Q sing 3 n n CAN CAM 14Q doub 4 n y CAN CAO 14Q sing 5 n y CAM CAR 14Q sing 6 n y CAK CAJ 14Q trip 7 n n OAZ CAO 14Q sing 8 n n OAZ CBA 14Q sing 9 n n CAO CAP 14Q doub 10 n y CAJ C5 14Q sing 11 n n C6 C5 14Q doub 12 n y C6 N1 14Q sing 13 n y CAR CAQ 14Q doub 14 n y CAP CAQ 14Q sing 15 n y C5 C4 14Q sing 16 n y N1 C2 14Q doub 17 n y CAQ CAS 14Q sing 18 n n CAX CAS 14Q doub 19 n y CAX CAW 14Q sing 20 n y C4 N3 14Q doub 21 n y C4 CAH 14Q sing 22 n n CAS CAT 14Q sing 23 n y C2 N3 14Q sing 24 n y C2 NAG 14Q sing 25 n n CAH CAY 14Q sing 26 n n CAW OBB 14Q sing 27 n n CAW CAV 14Q doub 28 n y OBB CBC 14Q sing 29 n n CAT CAU 14Q doub 30 n y CAV CAU 14Q sing 31 n y CAV OBD 14Q sing 32 n n CBC OBD 14Q sing 33 n n CAY H1 14Q sing 34 n n CAY H2 14Q sing 35 n n CAY H3 14Q sing 36 n n CAH H4 14Q sing 37 n n CAH H5 14Q sing 38 n n NAG H6 14Q sing 39 n n NAG H7 14Q sing 40 n n NAI H8 14Q sing 41 n n NAI H9 14Q sing 42 n n CAL H10 14Q sing 43 n n CAL H11 14Q sing 44 n n CAR H12 14Q sing 45 n n CAN H13 14Q sing 46 n n CBA H14 14Q sing 47 n n CBA H15 14Q sing 48 n n CBA H16 14Q sing 49 n n CAP H17 14Q sing 50 n n CAX H18 14Q sing 51 n n CBC H19 14Q sing 52 n n CBC H20 14Q sing 53 n n CAU H21 14Q sing 54 n n CAT H22 14Q sing 55 n n # _atom_sites.entry_id 4H96 _atom_sites.fract_transf_matrix[1][1] 0.008427 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025425 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 201 193 NDP NAP . D 3 14Q A 1 202 194 14Q 14Q . E 2 NDP B 1 201 193 NDP NAP . F 3 14Q B 1 202 194 14Q 14Q . G 4 HOH A 1 301 1 HOH HOH . G 4 HOH A 2 302 31 HOH HOH . G 4 HOH A 3 303 34 HOH HOH . G 4 HOH A 4 304 39 HOH HOH . H 4 HOH B 1 301 7 HOH HOH . H 4 HOH B 2 302 10 HOH HOH . H 4 HOH B 3 303 27 HOH HOH . H 4 HOH B 4 304 42 HOH HOH . H 4 HOH B 5 305 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAY 14Q . . . F 3 -16.577 -10.621 21.626 1 53.31 ? CAY 14Q 202 B 1 HETATM 2 C CAH 14Q . . . F 3 -17.988 -10.609 21.035 1 53.33 ? CAH 14Q 202 B 1 HETATM 3 C C4 14Q . . . F 3 -18.289 -11.919 20.297 1 53.33 ? C4 14Q 202 B 1 HETATM 4 N N3 14Q . . . F 3 -18.852 -12.96 21.059 1 53.34 ? N3 14Q 202 B 1 HETATM 5 C C2 14Q . . . F 3 -19.163 -14.196 20.472 1 53.36 ? C2 14Q 202 B 1 HETATM 6 N NAG 14Q . . . F 3 -19.695 -15.172 21.201 1 53.37 ? NAG 14Q 202 B 1 HETATM 7 N N1 14Q . . . F 3 -18.911 -14.397 19.111 1 53.33 ? N1 14Q 202 B 1 HETATM 8 C C6 14Q . . . F 3 -18.351 -13.363 18.349 1 53.32 ? C6 14Q 202 B 1 HETATM 9 N NAI 14Q . . . F 3 -18.117 -13.568 17.057 1 53.31 ? NAI 14Q 202 B 1 HETATM 10 C C5 14Q . . . F 3 -18.042 -12.134 18.937 1 53.33 ? C5 14Q 202 B 1 HETATM 11 C CAJ 14Q . . . F 3 -17.469 -11.091 18.136 1 53.37 ? CAJ 14Q 202 B 1 HETATM 12 C CAK 14Q . . . F 3 -16.98 -10.211 17.436 1 53.42 ? CAK 14Q 202 B 1 HETATM 13 C CAL 14Q . . . F 3 -16.393 -9.148 16.608 1 53.46 ? CAL 14Q 202 B 1 HETATM 14 C CAM 14Q . . . F 3 -15.896 -7.982 17.467 1 53.49 ? CAM 14Q 202 B 1 HETATM 15 C CAR 14Q . . . F 3 -14.81 -8.156 18.326 1 53.5 ? CAR 14Q 202 B 1 HETATM 16 C CAN 14Q . . . F 3 -16.529 -6.741 17.386 1 53.51 ? CAN 14Q 202 B 1 HETATM 17 C CAO 14Q . . . F 3 -16.084 -5.673 18.169 1 53.55 ? CAO 14Q 202 B 1 HETATM 18 O OAZ 14Q . . . F 3 -16.702 -4.458 18.088 1 53.57 ? OAZ 14Q 202 B 1 HETATM 19 C CBA 14Q . . . F 3 -17.789 -4.329 19.025 1 53.58 ? CBA 14Q 202 B 1 HETATM 20 C CAP 14Q . . . F 3 -14.994 -5.851 19.026 1 53.54 ? CAP 14Q 202 B 1 HETATM 21 C CAQ 14Q . . . F 3 -14.358 -7.091 19.107 1 53.53 ? CAQ 14Q 202 B 1 HETATM 22 C CAS 14Q . . . F 3 -13.277 -7.266 19.966 1 53.56 ? CAS 14Q 202 B 1 HETATM 23 C CAX 14Q . . . F 3 -11.986 -6.939 19.547 1 53.55 ? CAX 14Q 202 B 1 HETATM 24 C CAW 14Q . . . F 3 -10.906 -7.115 20.413 1 53.57 ? CAW 14Q 202 B 1 HETATM 25 O OBB 14Q . . . F 3 -9.574 -6.881 20.26 1 53.59 ? OBB 14Q 202 B 1 HETATM 26 C CBC 14Q . . . F 3 -8.961 -7.699 21.264 1 53.59 ? CBC 14Q 202 B 1 HETATM 27 O OBD 14Q . . . F 3 -9.915 -7.693 22.331 1 53.58 ? OBD 14Q 202 B 1 HETATM 28 C CAV 14Q . . . F 3 -11.117 -7.619 21.698 1 53.58 ? CAV 14Q 202 B 1 HETATM 29 C CAU 14Q . . . F 3 -12.406 -7.946 22.116 1 53.59 ? CAU 14Q 202 B 1 HETATM 30 C CAT 14Q . . . F 3 -13.485 -7.769 21.251 1 53.56 ? CAT 14Q 202 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #