data_4H97
#
_model_server_result.job_id            D5so-xKPrH1CEMSMVHkAkw 
_model_server_result.datetime_utc      '2024-11-23 21:26:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4h97 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    4H97 
#
_exptl.entry_id    4H97 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4H97 
_cell.length_a            118 
_cell.length_b            118 
_cell.length_c            39.116 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4H97 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,H 1 1 
B,E,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 291 n n 
PA O2A NDP sing 292 n n 
PA O5B NDP sing 293 n n 
PA O3 NDP sing 294 n n 
O2A HOA2 NDP sing 295 n n 
O5B C5B NDP sing 296 n n 
C5B C4B NDP sing 297 n n 
C5B H51A NDP sing 298 n n 
C5B H52A NDP sing 299 n n 
C4B O4B NDP sing 300 n n 
C4B C3B NDP sing 301 n n 
C4B H4B NDP sing 302 n n 
O4B C1B NDP sing 303 n n 
C3B O3B NDP sing 304 n n 
C3B C2B NDP sing 305 n n 
C3B H3B NDP sing 306 n n 
O3B HO3A NDP sing 307 n n 
C2B O2B NDP sing 308 n n 
C2B C1B NDP sing 309 n n 
C2B H2B NDP sing 310 n n 
O2B P2B NDP sing 311 n n 
C1B N9A NDP sing 312 n n 
C1B H1B NDP sing 313 n n 
N9A C8A NDP sing 314 n y 
N9A C4A NDP sing 315 n y 
C8A N7A NDP doub 316 n y 
C8A H8A NDP sing 317 n n 
N7A C5A NDP sing 318 n y 
C5A C6A NDP sing 319 n y 
C5A C4A NDP doub 320 n y 
C6A N6A NDP sing 321 n n 
C6A N1A NDP doub 322 n y 
N6A H61A NDP sing 323 n n 
N6A H62A NDP sing 324 n n 
N1A C2A NDP sing 325 n y 
C2A N3A NDP doub 326 n y 
C2A H2A NDP sing 327 n n 
N3A C4A NDP sing 328 n y 
O3 PN NDP sing 329 n n 
PN O1N NDP doub 330 n n 
PN O2N NDP sing 331 n n 
PN O5D NDP sing 332 n n 
O2N H21N NDP sing 333 n n 
O5D C5D NDP sing 334 n n 
C5D C4D NDP sing 335 n n 
C5D H51N NDP sing 336 n n 
C5D H52N NDP sing 337 n n 
C4D O4D NDP sing 338 n n 
C4D C3D NDP sing 339 n n 
C4D H4D NDP sing 340 n n 
O4D C1D NDP sing 341 n n 
C3D O3D NDP sing 342 n n 
C3D C2D NDP sing 343 n n 
C3D H3D NDP sing 344 n n 
O3D HO3N NDP sing 345 n n 
C2D O2D NDP sing 346 n n 
C2D C1D NDP sing 347 n n 
C2D H2D NDP sing 348 n n 
O2D HO2N NDP sing 349 n n 
C1D N1N NDP sing 350 n n 
C1D H1D NDP sing 351 n n 
N1N C2N NDP sing 352 n n 
N1N C6N NDP sing 353 n n 
C2N C3N NDP doub 354 n n 
C2N H2N NDP sing 355 n n 
C3N C7N NDP sing 356 n n 
C3N C4N NDP sing 357 n n 
C7N O7N NDP doub 358 n n 
C7N N7N NDP sing 359 n n 
N7N H71N NDP sing 360 n n 
N7N H72N NDP sing 361 n n 
C4N C5N NDP sing 362 n n 
C4N H41N NDP sing 363 n n 
C4N H42N NDP sing 364 n n 
C5N C6N NDP doub 365 n n 
C5N H5N NDP sing 366 n n 
C6N H6N NDP sing 367 n n 
P2B O1X NDP doub 368 n n 
P2B O2X NDP sing 369 n n 
P2B O3X NDP sing 370 n n 
O2X HOP2 NDP sing 371 n n 
O3X HOP3 NDP sing 372 n n 
#
_atom_sites.entry_id                     4H97 
_atom_sites.fract_transf_matrix[1][1]    0.008475 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008475 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025565 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 201 193 NDP NAP . 
D 3 53S A 1 202 229 53S 53S . 
E 2 NDP B 1 201 193 NDP NAP . 
F 3 53S B 1 202 229 53S 53S . 
G 4 GOL B 1 203 1 GOL GOL . 
H 5 HOH A 1 301 10 HOH HOH . 
H 5 HOH A 2 302 12 HOH HOH . 
H 5 HOH A 3 303 16 HOH HOH . 
H 5 HOH A 4 304 25 HOH HOH . 
H 5 HOH A 5 305 57 HOH HOH . 
H 5 HOH A 6 306 60 HOH HOH . 
H 5 HOH A 7 307 66 HOH HOH . 
H 5 HOH A 8 308 69 HOH HOH . 
H 5 HOH A 9 309 70 HOH HOH . 
H 5 HOH A 10 310 71 HOH HOH . 
H 5 HOH A 11 311 72 HOH HOH . 
H 5 HOH A 12 312 73 HOH HOH . 
H 5 HOH A 13 313 74 HOH HOH . 
I 5 HOH B 1 301 1 HOH HOH . 
I 5 HOH B 2 302 21 HOH HOH . 
I 5 HOH B 3 303 31 HOH HOH . 
I 5 HOH B 4 304 35 HOH HOH . 
I 5 HOH B 5 305 44 HOH HOH . 
I 5 HOH B 6 306 56 HOH HOH . 
I 5 HOH B 7 307 68 HOH HOH . 
I 5 HOH B 8 308 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . C 2 19.36 49.171 9.076 1 42.04 ? PA NDP 201 A 1 
HETATM 2 O O1A NDP . . . C 2 20.192 47.959 9.253 1 41.21 ? O1A NDP 201 A 1 
HETATM 3 O O2A NDP . . . C 2 18.173 48.882 8.248 1 41.5 ? O2A NDP 201 A 1 
HETATM 4 O O5B NDP . . . C 2 18.905 49.783 10.484 1 42.48 ? O5B NDP 201 A 1 
HETATM 5 C C5B NDP . . . C 2 19.58 49.478 11.677 1 43.02 ? C5B NDP 201 A 1 
HETATM 6 C C4B NDP . . . C 2 18.523 49.57 12.759 1 43.89 ? C4B NDP 201 A 1 
HETATM 7 O O4B NDP . . . C 2 17.846 48.331 12.89 1 44.16 ? O4B NDP 201 A 1 
HETATM 8 C C3B NDP . . . C 2 19.11 49.897 14.116 1 44.16 ? C3B NDP 201 A 1 
HETATM 9 O O3B NDP . . . C 2 19.204 51.285 14.317 1 44.89 ? O3B NDP 201 A 1 
HETATM 10 C C2B NDP . . . C 2 18.127 49.228 15.043 1 44.46 ? C2B NDP 201 A 1 
HETATM 11 O O2B NDP . . . C 2 17.026 50.061 15.301 1 44.37 ? O2B NDP 201 A 1 
HETATM 12 C C1B NDP . . . C 2 17.642 48.02 14.258 1 44.77 ? C1B NDP 201 A 1 
HETATM 13 N N9A NDP . . . C 2 18.379 46.791 14.609 1 45.28 ? N9A NDP 201 A 1 
HETATM 14 C C8A NDP . . . C 2 19.663 46.47 14.246 1 45.46 ? C8A NDP 201 A 1 
HETATM 15 N N7A NDP . . . C 2 19.97 45.256 14.754 1 45.4 ? N7A NDP 201 A 1 
HETATM 16 C C5A NDP . . . C 2 18.902 44.793 15.435 1 45.34 ? C5A NDP 201 A 1 
HETATM 17 C C6A NDP . . . C 2 18.685 43.615 16.14 1 45.62 ? C6A NDP 201 A 1 
HETATM 18 N N6A NDP . . . C 2 19.653 42.704 16.22 1 45.97 ? N6A NDP 201 A 1 
HETATM 19 N N1A NDP . . . C 2 17.463 43.401 16.753 1 45.5 ? N1A NDP 201 A 1 
HETATM 20 C C2A NDP . . . C 2 16.468 44.359 16.658 1 45.64 ? C2A NDP 201 A 1 
HETATM 21 N N3A NDP . . . C 2 16.692 45.53 15.957 1 45.36 ? N3A NDP 201 A 1 
HETATM 22 C C4A NDP . . . C 2 17.89 45.745 15.352 1 45.4 ? C4A NDP 201 A 1 
HETATM 23 O O3 NDP . . . C 2 20.214 50.383 8.46 1 43.12 ? O3 NDP 201 A 1 
HETATM 24 P PN NDP . . . C 2 21.784 50.558 8.182 1 44.46 ? PN NDP 201 A 1 
HETATM 25 O O1N NDP . . . C 2 22.127 51.989 8.37 1 44.02 ? O1N NDP 201 A 1 
HETATM 26 O O2N NDP . . . C 2 22.516 49.512 8.933 1 44.41 ? O2N NDP 201 A 1 
HETATM 27 O O5D NDP . . . C 2 21.872 50.202 6.616 1 45.28 ? O5D NDP 201 A 1 
HETATM 28 C C5D NDP . . . C 2 21.5 51.139 5.628 1 46.8 ? C5D NDP 201 A 1 
HETATM 29 C C4D NDP . . . C 2 22.385 50.906 4.411 1 47.71 ? C4D NDP 201 A 1 
HETATM 30 O O4D NDP . . . C 2 22.11 49.628 3.871 1 48.18 ? O4D NDP 201 A 1 
HETATM 31 C C3D NDP . . . C 2 22.149 51.922 3.306 1 48.31 ? C3D NDP 201 A 1 
HETATM 32 O O3D NDP . . . C 2 23.36 52.548 2.965 1 48.82 ? O3D NDP 201 A 1 
HETATM 33 C C2D NDP . . . C 2 21.63 51.128 2.132 1 48.63 ? C2D NDP 201 A 1 
HETATM 34 O O2D NDP . . . C 2 22.199 51.556 0.917 1 49.14 ? O2D NDP 201 A 1 
HETATM 35 C C1D NDP . . . C 2 22.042 49.703 2.457 1 48.42 ? C1D NDP 201 A 1 
HETATM 36 N N1N NDP . . . C 2 21.093 48.723 1.894 1 48.17 ? N1N NDP 201 A 1 
HETATM 37 C C2N NDP . . . C 2 21.453 48.082 0.737 1 47.9 ? C2N NDP 201 A 1 
HETATM 38 C C3N NDP . . . C 2 20.61 47.139 0.155 1 47.68 ? C3N NDP 201 A 1 
HETATM 39 C C7N NDP . . . C 2 21.096 46.327 -1.013 1 47.47 ? C7N NDP 201 A 1 
HETATM 40 O O7N NDP . . . C 2 20.47 45.1 -1.316 1 47.7 ? O7N NDP 201 A 1 
HETATM 41 N N7N NDP . . . C 2 22.115 46.784 -1.743 1 47.36 ? N7N NDP 201 A 1 
HETATM 42 C C4N NDP . . . C 2 19.389 46.849 0.769 1 47.75 ? C4N NDP 201 A 1 
HETATM 43 C C5N NDP . . . C 2 19.031 47.501 1.95 1 47.96 ? C5N NDP 201 A 1 
HETATM 44 C C6N NDP . . . C 2 19.897 48.441 2.509 1 48.09 ? C6N NDP 201 A 1 
HETATM 45 P P2B NDP . . . C 2 16.935 50.966 16.628 1 44.02 ? P2B NDP 201 A 1 
HETATM 46 O O1X NDP . . . C 2 15.635 51.727 16.575 1 43.42 ? O1X NDP 201 A 1 
HETATM 47 O O2X NDP . . . C 2 16.974 50.077 17.847 1 43.38 ? O2X NDP 201 A 1 
HETATM 48 O O3X NDP . . . C 2 18.095 51.931 16.652 1 44.4 ? O3X NDP 201 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           598 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#