data_4H98
#
_model_server_result.job_id            mfx9gUNzOpFKYZUDwtptPw 
_model_server_result.datetime_utc      '2024-11-06 02:51:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4h98 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    4H98 
#
_exptl.entry_id    4H98 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              402.446 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-{3-[3-(1,3-benzodioxol-5-yl)-5-methoxyphenyl]prop-1-yn-1-yl}-6-ethylpyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4H98 
_cell.length_a            42.706 
_cell.length_b            42.706 
_cell.length_c            230.46 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4H98 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C23 H22 N4 O3' 
_chem_comp.formula_weight    402.446 
_chem_comp.id                14Q 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-{3-[3-(1,3-benzodioxol-5-yl)-5-methoxyphenyl]prop-1-yn-1-yl}-6-ethylpyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAL CAM 14Q sing 1 n n 
CAL CAK 14Q sing 2 n n 
NAI C6 14Q sing 3 n n 
CAN CAM 14Q doub 4 n y 
CAN CAO 14Q sing 5 n y 
CAM CAR 14Q sing 6 n y 
CAK CAJ 14Q trip 7 n n 
OAZ CAO 14Q sing 8 n n 
OAZ CBA 14Q sing 9 n n 
CAO CAP 14Q doub 10 n y 
CAJ C5 14Q sing 11 n n 
C6 C5 14Q doub 12 n y 
C6 N1 14Q sing 13 n y 
CAR CAQ 14Q doub 14 n y 
CAP CAQ 14Q sing 15 n y 
C5 C4 14Q sing 16 n y 
N1 C2 14Q doub 17 n y 
CAQ CAS 14Q sing 18 n n 
CAX CAS 14Q doub 19 n y 
CAX CAW 14Q sing 20 n y 
C4 N3 14Q doub 21 n y 
C4 CAH 14Q sing 22 n n 
CAS CAT 14Q sing 23 n y 
C2 N3 14Q sing 24 n y 
C2 NAG 14Q sing 25 n n 
CAH CAY 14Q sing 26 n n 
CAW OBB 14Q sing 27 n n 
CAW CAV 14Q doub 28 n y 
OBB CBC 14Q sing 29 n n 
CAT CAU 14Q doub 30 n y 
CAV CAU 14Q sing 31 n y 
CAV OBD 14Q sing 32 n n 
CBC OBD 14Q sing 33 n n 
CAY H1 14Q sing 34 n n 
CAY H2 14Q sing 35 n n 
CAY H3 14Q sing 36 n n 
CAH H4 14Q sing 37 n n 
CAH H5 14Q sing 38 n n 
NAG H6 14Q sing 39 n n 
NAG H7 14Q sing 40 n n 
NAI H8 14Q sing 41 n n 
NAI H9 14Q sing 42 n n 
CAL H10 14Q sing 43 n n 
CAL H11 14Q sing 44 n n 
CAR H12 14Q sing 45 n n 
CAN H13 14Q sing 46 n n 
CBA H14 14Q sing 47 n n 
CBA H15 14Q sing 48 n n 
CBA H16 14Q sing 49 n n 
CAP H17 14Q sing 50 n n 
CAX H18 14Q sing 51 n n 
CBC H19 14Q sing 52 n n 
CBC H20 14Q sing 53 n n 
CAU H21 14Q sing 54 n n 
CAT H22 14Q sing 55 n n 
#
_atom_sites.entry_id                     4H98 
_atom_sites.fract_transf_matrix[1][1]    0.023416 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023416 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004339 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 301 193 NDP NAP . 
D 3 14Q A 1 302 194 14Q 14Q . 
E 2 NDP B 1 301 193 NDP NAP . 
F 3 14Q B 1 302 194 14Q 14Q . 
G 4 HOH A 1 401 3 HOH HOH . 
G 4 HOH A 2 402 5 HOH HOH . 
G 4 HOH A 3 403 6 HOH HOH . 
G 4 HOH A 4 404 7 HOH HOH . 
G 4 HOH A 5 405 8 HOH HOH . 
G 4 HOH A 6 406 10 HOH HOH . 
G 4 HOH A 7 407 11 HOH HOH . 
G 4 HOH A 8 408 13 HOH HOH . 
G 4 HOH A 9 409 23 HOH HOH . 
G 4 HOH A 10 410 27 HOH HOH . 
G 4 HOH A 11 411 28 HOH HOH . 
G 4 HOH A 12 412 36 HOH HOH . 
G 4 HOH A 13 413 43 HOH HOH . 
G 4 HOH A 14 414 46 HOH HOH . 
G 4 HOH A 15 415 49 HOH HOH . 
H 4 HOH B 1 401 1 HOH HOH . 
H 4 HOH B 2 402 2 HOH HOH . 
H 4 HOH B 3 403 9 HOH HOH . 
H 4 HOH B 4 404 12 HOH HOH . 
H 4 HOH B 5 405 17 HOH HOH . 
H 4 HOH B 6 406 18 HOH HOH . 
H 4 HOH B 7 407 26 HOH HOH . 
H 4 HOH B 8 408 38 HOH HOH . 
H 4 HOH B 9 409 41 HOH HOH . 
H 4 HOH B 10 410 42 HOH HOH . 
H 4 HOH B 11 411 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAY 14Q . . . D 3 13.779 -9.527 -6.596 1 35.83 ? CAY 14Q 302 A 1 
HETATM 2 C CAH 14Q . . . D 3 14.67 -8.538 -5.845 1 35.98 ? CAH 14Q 302 A 1 
HETATM 3 C C4 14Q . . . D 3 15.245 -9.143 -4.553 1 36.45 ? C4 14Q 302 A 1 
HETATM 4 N N3 14Q . . . D 3 16.094 -10.264 -4.682 1 36.61 ? N3 14Q 302 A 1 
HETATM 5 C C2 14Q . . . D 3 16.664 -10.876 -3.552 1 36.61 ? C2 14Q 302 A 1 
HETATM 6 N NAG 14Q . . . D 3 17.461 -11.934 -3.69 1 36.55 ? NAG 14Q 302 A 1 
HETATM 7 N N1 14Q . . . D 3 16.389 -10.366 -2.276 1 36.42 ? N1 14Q 302 A 1 
HETATM 8 C C6 14Q . . . D 3 15.55 -9.25 -2.14 1 36.57 ? C6 14Q 302 A 1 
HETATM 9 N NAI 14Q . . . D 3 15.297 -8.777 -0.92 1 36.45 ? NAI 14Q 302 A 1 
HETATM 10 C C5 14Q . . . D 3 14.983 -8.646 -3.271 1 36.65 ? C5 14Q 302 A 1 
HETATM 11 C CAJ 14Q . . . D 3 14.126 -7.509 -3.097 1 36.74 ? CAJ 14Q 302 A 1 
HETATM 12 C CAK 14Q . . . D 3 13.394 -6.541 -2.953 1 37.19 ? CAK 14Q 302 A 1 
HETATM 13 C CAL 14Q . . . D 3 12.52 -5.38 -2.74 1 37.58 ? CAL 14Q 302 A 1 
HETATM 14 C CAM 14Q . . . D 3 12.163 -4.638 -4.026 1 38.35 ? CAM 14Q 302 A 1 
HETATM 15 C CAR 14Q . . . D 3 11.139 -5.098 -4.857 1 38.61 ? CAR 14Q 302 A 1 
HETATM 16 C CAN 14Q . . . D 3 12.862 -3.48 -4.353 1 38.64 ? CAN 14Q 302 A 1 
HETATM 17 C CAO 14Q . . . D 3 12.552 -2.78 -5.519 1 39.16 ? CAO 14Q 302 A 1 
HETATM 18 O OAZ 14Q . . . D 3 13.235 -1.64 -5.849 1 39.58 ? OAZ 14Q 302 A 1 
HETATM 19 C CBA 14Q . . . D 3 14.653 -1.709 -5.59 1 38.92 ? CBA 14Q 302 A 1 
HETATM 20 C CAP 14Q . . . D 3 11.524 -3.242 -6.35 1 38.95 ? CAP 14Q 302 A 1 
HETATM 21 C CAQ 14Q . . . D 3 10.813 -4.407 -6.031 1 39.09 ? CAQ 14Q 302 A 1 
HETATM 22 C CAS 14Q . . . D 3 9.778 -4.872 -6.858 1 39.5 ? CAS 14Q 302 A 1 
HETATM 23 C CAX 14Q . . . D 3 9.864 -4.805 -8.254 1 39.82 ? CAX 14Q 302 A 1 
HETATM 24 C CAW 14Q . . . D 3 8.812 -5.269 -9.053 1 39.95 ? CAW 14Q 302 A 1 
HETATM 25 O OBB 14Q . . . D 3 8.653 -5.316 -10.406 1 39.93 ? OBB 14Q 302 A 1 
HETATM 26 C CBC 14Q . . . D 3 7.237 -5.463 -10.6 1 39.68 ? CBC 14Q 302 A 1 
HETATM 27 O OBD 14Q . . . D 3 6.8 -6.189 -9.442 1 39.84 ? OBD 14Q 302 A 1 
HETATM 28 C CAV 14Q . . . D 3 7.666 -5.808 -8.461 1 40.1 ? CAV 14Q 302 A 1 
HETATM 29 C CAU 14Q . . . D 3 7.575 -5.876 -7.072 1 40 ? CAU 14Q 302 A 1 
HETATM 30 C CAT 14Q . . . D 3 8.623 -5.409 -6.28 1 39.57 ? CAT 14Q 302 A 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           30 
#