data_4HBJ # _model_server_result.job_id rae4xETa6x973H4KZ4EiqA _model_server_result.datetime_utc '2024-11-13 05:51:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hbj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":402}' # _entry.id 4HBJ # _exptl.entry_id 4HBJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HBJ _cell.length_a 139.54 _cell.length_b 139.54 _cell.length_c 185.07 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HBJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 190 L HIS 190 1_555 I FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc2 A NE2 HIS 230 L HIS 230 1_555 I FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc3 B NE2 HIS 219 M HIS 219 1_555 I FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc4 B OE2 GLU 234 M GLU 234 1_555 I FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc5 B OE1 GLU 234 M GLU 234 1_555 I FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc6 B NE2 HIS 266 M HIS 266 1_555 I FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4HBJ _atom_sites.fract_transf_matrix[1][1] 0.007166 _atom_sites.fract_transf_matrix[1][2] 0.004138 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008275 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005403 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 301 302 BCL BCL . E 4 BCL L 1 302 304 BCL BCL . F 5 BPH L 1 303 402 BPH BPH . G 6 U10 L 1 304 502 U10 U10 . H 4 BCL M 1 401 301 BCL BCL . I 7 FE M 1 402 500 FE FE . J 4 BCL M 1 403 801 BCL BCL . K 5 BPH M 1 404 401 BPH BPH . L 6 U10 M 1 405 501 U10 U10 . M 8 SPO M 1 406 600 SPO SPO . N 9 HOH L 1 401 2 HOH HOH . N 9 HOH L 2 402 11 HOH HOH . N 9 HOH L 3 403 12 HOH HOH . N 9 HOH L 4 404 20 HOH HOH . N 9 HOH L 5 405 21 HOH HOH . N 9 HOH L 6 406 31 HOH HOH . N 9 HOH L 7 407 33 HOH HOH . N 9 HOH L 8 408 34 HOH HOH . N 9 HOH L 9 409 46 HOH HOH . N 9 HOH L 10 410 49 HOH HOH . N 9 HOH L 11 411 52 HOH HOH . N 9 HOH L 12 412 57 HOH HOH . N 9 HOH L 13 413 59 HOH HOH . N 9 HOH L 14 414 61 HOH HOH . N 9 HOH L 15 415 73 HOH HOH . N 9 HOH L 16 416 100 HOH HOH . N 9 HOH L 17 417 140 HOH HOH . N 9 HOH L 18 418 154 HOH HOH . O 9 HOH M 1 501 4 HOH HOH . O 9 HOH M 2 502 10 HOH HOH . O 9 HOH M 3 503 18 HOH HOH . O 9 HOH M 4 504 23 HOH HOH . O 9 HOH M 5 505 32 HOH HOH . O 9 HOH M 6 506 40 HOH HOH . O 9 HOH M 7 507 43 HOH HOH . O 9 HOH M 8 508 54 HOH HOH . O 9 HOH M 9 509 60 HOH HOH . O 9 HOH M 10 510 62 HOH HOH . O 9 HOH M 11 511 65 HOH HOH . O 9 HOH M 12 512 71 HOH HOH . O 9 HOH M 13 513 81 HOH HOH . O 9 HOH M 14 514 98 HOH HOH . O 9 HOH M 15 515 106 HOH HOH . O 9 HOH M 16 516 143 HOH HOH . O 9 HOH M 17 517 144 HOH HOH . O 9 HOH M 18 518 148 HOH HOH . O 9 HOH M 19 519 176 HOH HOH . P 9 HOH H 1 301 5 HOH HOH . P 9 HOH H 2 302 7 HOH HOH . P 9 HOH H 3 303 9 HOH HOH . P 9 HOH H 4 304 15 HOH HOH . P 9 HOH H 5 305 16 HOH HOH . P 9 HOH H 6 306 38 HOH HOH . P 9 HOH H 7 307 39 HOH HOH . P 9 HOH H 8 308 42 HOH HOH . P 9 HOH H 9 309 44 HOH HOH . P 9 HOH H 10 310 45 HOH HOH . P 9 HOH H 11 311 56 HOH HOH . P 9 HOH H 12 312 66 HOH HOH . P 9 HOH H 13 313 72 HOH HOH . P 9 HOH H 14 314 82 HOH HOH . P 9 HOH H 15 315 84 HOH HOH . P 9 HOH H 16 316 90 HOH HOH . P 9 HOH H 17 317 92 HOH HOH . P 9 HOH H 18 318 101 HOH HOH . P 9 HOH H 19 319 107 HOH HOH . P 9 HOH H 20 320 108 HOH HOH . P 9 HOH H 21 321 109 HOH HOH . P 9 HOH H 22 322 113 HOH HOH . P 9 HOH H 23 323 123 HOH HOH . P 9 HOH H 24 324 145 HOH HOH . P 9 HOH H 25 325 147 HOH HOH . P 9 HOH H 26 326 159 HOH HOH . P 9 HOH H 27 327 164 HOH HOH . P 9 HOH H 28 328 174 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 7 _atom_site.Cartn_x 28.247 _atom_site.Cartn_y 73.572 _atom_site.Cartn_z 21.398 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 402 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #