data_4HBN # _model_server_result.job_id hrKwijYQDEZ_iWo_hPzO1Q _model_server_result.datetime_utc '2024-10-12 14:29:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hbn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 4HBN # _exptl.entry_id 4HBN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HBN _cell.length_a 95.467 _cell.length_b 95.467 _cell.length_c 115.99 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HBN _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 4HBN _atom_sites.fract_transf_matrix[1][1] 0.010475 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CMP A 1 801 201 CMP CMP . C 3 PO4 A 1 802 1 PO4 PO4 . D 4 HOH A 1 901 1 HOH HOH . D 4 HOH A 2 902 2 HOH HOH . D 4 HOH A 3 903 3 HOH HOH . D 4 HOH A 4 904 4 HOH HOH . D 4 HOH A 5 905 5 HOH HOH . D 4 HOH A 6 906 6 HOH HOH . D 4 HOH A 7 907 7 HOH HOH . D 4 HOH A 8 908 8 HOH HOH . D 4 HOH A 9 909 9 HOH HOH . D 4 HOH A 10 910 10 HOH HOH . D 4 HOH A 11 911 11 HOH HOH . D 4 HOH A 12 912 12 HOH HOH . D 4 HOH A 13 913 13 HOH HOH . D 4 HOH A 14 914 14 HOH HOH . D 4 HOH A 15 915 15 HOH HOH . D 4 HOH A 16 916 16 HOH HOH . D 4 HOH A 17 917 17 HOH HOH . D 4 HOH A 18 918 18 HOH HOH . D 4 HOH A 19 919 19 HOH HOH . D 4 HOH A 20 920 20 HOH HOH . D 4 HOH A 21 921 21 HOH HOH . D 4 HOH A 22 922 22 HOH HOH . D 4 HOH A 23 923 23 HOH HOH . D 4 HOH A 24 924 24 HOH HOH . D 4 HOH A 25 925 25 HOH HOH . D 4 HOH A 26 926 26 HOH HOH . D 4 HOH A 27 927 27 HOH HOH . D 4 HOH A 28 928 28 HOH HOH . D 4 HOH A 29 929 29 HOH HOH . D 4 HOH A 30 930 30 HOH HOH . D 4 HOH A 31 931 31 HOH HOH . D 4 HOH A 32 932 32 HOH HOH . D 4 HOH A 33 933 33 HOH HOH . D 4 HOH A 34 934 34 HOH HOH . D 4 HOH A 35 935 35 HOH HOH . D 4 HOH A 36 936 36 HOH HOH . D 4 HOH A 37 937 37 HOH HOH . D 4 HOH A 38 938 38 HOH HOH . D 4 HOH A 39 939 39 HOH HOH . D 4 HOH A 40 940 40 HOH HOH . D 4 HOH A 41 941 41 HOH HOH . D 4 HOH A 42 942 42 HOH HOH . D 4 HOH A 43 943 43 HOH HOH . D 4 HOH A 44 944 44 HOH HOH . D 4 HOH A 45 945 45 HOH HOH . D 4 HOH A 46 946 46 HOH HOH . D 4 HOH A 47 947 47 HOH HOH . D 4 HOH A 48 948 48 HOH HOH . D 4 HOH A 49 949 49 HOH HOH . D 4 HOH A 50 950 50 HOH HOH . D 4 HOH A 51 951 51 HOH HOH . D 4 HOH A 52 952 52 HOH HOH . D 4 HOH A 53 953 53 HOH HOH . D 4 HOH A 54 954 54 HOH HOH . D 4 HOH A 55 955 55 HOH HOH . D 4 HOH A 56 956 56 HOH HOH . D 4 HOH A 57 957 57 HOH HOH . D 4 HOH A 58 958 58 HOH HOH . D 4 HOH A 59 959 59 HOH HOH . D 4 HOH A 60 960 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . B 2 -26.24 -4.788 44.749 1 44.08 ? P CMP 801 A 1 HETATM 2 O O1P CMP . . . B 2 -26.326 -5.378 46.141 1 44.47 ? O1P CMP 801 A 1 HETATM 3 O O2P CMP . . . B 2 -24.834 -4.343 44.409 1 44.46 ? O2P CMP 801 A 1 HETATM 4 O O5' CMP . . . B 2 -26.739 -5.851 43.651 1 40 ? O5' CMP 801 A 1 HETATM 5 C C5' CMP . . . B 2 -28.117 -6.042 43.358 1 38.15 ? C5' CMP 801 A 1 HETATM 6 C C4' CMP . . . B 2 -28.653 -4.639 43.159 1 41.17 ? C4' CMP 801 A 1 HETATM 7 O O4' CMP . . . B 2 -30.032 -4.622 42.836 1 41.1 ? O4' CMP 801 A 1 HETATM 8 C C3' CMP . . . B 2 -28.598 -3.879 44.465 1 43.51 ? C3' CMP 801 A 1 HETATM 9 O O3' CMP . . . B 2 -27.245 -3.532 44.675 1 43.4 ? O3' CMP 801 A 1 HETATM 10 C C2' CMP . . . B 2 -29.537 -2.722 44.214 1 41.72 ? C2' CMP 801 A 1 HETATM 11 O O2' CMP . . . B 2 -28.835 -1.676 43.542 1 41.81 ? O2' CMP 801 A 1 HETATM 12 C C1' CMP . . . B 2 -30.539 -3.366 43.267 1 41.52 ? C1' CMP 801 A 1 HETATM 13 N N9 CMP . . . B 2 -31.76 -3.672 44.025 1 41.98 ? N9 CMP 801 A 1 HETATM 14 C C8 CMP . . . B 2 -31.865 -4.556 45.025 1 45.43 ? C8 CMP 801 A 1 HETATM 15 N N7 CMP . . . B 2 -33.133 -4.589 45.502 1 49.3 ? N7 CMP 801 A 1 HETATM 16 C C5 CMP . . . B 2 -33.859 -3.711 44.782 1 47.48 ? C5 CMP 801 A 1 HETATM 17 C C6 CMP . . . B 2 -35.27 -3.247 44.762 1 51.45 ? C6 CMP 801 A 1 HETATM 18 N N6 CMP . . . B 2 -36.178 -3.759 45.63 1 55.51 ? N6 CMP 801 A 1 HETATM 19 N N1 CMP . . . B 2 -35.613 -2.321 43.836 1 50.48 ? N1 CMP 801 A 1 HETATM 20 C C2 CMP . . . B 2 -34.703 -1.844 42.958 1 52.36 ? C2 CMP 801 A 1 HETATM 21 N N3 CMP . . . B 2 -33.409 -2.214 42.91 1 46.81 ? N3 CMP 801 A 1 HETATM 22 C C4 CMP . . . B 2 -32.942 -3.12 43.794 1 43.65 ? C4 CMP 801 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #