data_4HC1
#
_model_server_result.job_id            2pRBq58Ld1QVtHDIz4Hwag 
_model_server_result.datetime_utc      '2024-11-27 01:59:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hc1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2061}' 
#
_entry.id    4HC1 
#
_exptl.entry_id    4HC1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.29 
_cell.angle_gamma         90 
_cell.entry_id            4HC1 
_cell.length_a            317.854 
_cell.length_b            71.727 
_cell.length_c            70.557 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HC1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,I,J,K 1 1 
D,E,F,H,L,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 25 A CYS 25 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 29 A CYS 29 1_555 A SG CYS 76 A CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 112 A CYS 112 1_555 A SG CYS 178 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 B SG CYS 145 H CYS 145 1_555 B SG CYS 200 H CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 C SG CYS 23 L CYS 23 1_555 C SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf7 C SG CYS 134 L CYS 134 1_555 C SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf8 D SG CYS 25 B CYS 25 1_555 D SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf9 D SG CYS 29 B CYS 29 1_555 D SG CYS 76 B CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf10 D SG CYS 112 B CYS 112 1_555 D SG CYS 178 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf11 E SG CYS 22 M CYS 22 1_555 E SG CYS 96 M CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf12 E SG CYS 145 M CYS 145 1_555 E SG CYS 200 M CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 F SG CYS 23 N CYS 23 1_555 F SG CYS 88 N CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf14 F SG CYS 134 N CYS 134 1_555 F SG CYS 194 N CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
covale ? covale1 A ND2 ASN 61 A ASN 61 1_555 G C1 NAG . A NAG 2061 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 D ND2 ASN 61 B ASN 61 1_555 H C1 NAG . B NAG 2061 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4HC1 
_atom_sites.fract_transf_matrix[1][1]    0.003146 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000181 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013942 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014196 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 NAG A 1 2061 3061 NAG NAG . 
H 4 NAG B 1 2061 3061 NAG NAG . 
I 5 HOH A 1 401 1 HOH HOH . 
I 5 HOH A 2 402 5 HOH HOH . 
I 5 HOH A 3 403 10 HOH HOH . 
I 5 HOH A 4 404 14 HOH HOH . 
I 5 HOH A 5 405 22 HOH HOH . 
J 5 HOH H 1 301 9 HOH HOH . 
K 5 HOH L 1 301 4 HOH HOH . 
K 5 HOH L 2 302 12 HOH HOH . 
K 5 HOH L 3 303 21 HOH HOH . 
K 5 HOH L 4 304 24 HOH HOH . 
K 5 HOH L 5 305 26 HOH HOH . 
K 5 HOH L 6 306 27 HOH HOH . 
K 5 HOH L 7 307 31 HOH HOH . 
L 5 HOH B 1 401 3 HOH HOH . 
L 5 HOH B 2 402 6 HOH HOH . 
L 5 HOH B 3 403 11 HOH HOH . 
L 5 HOH B 4 404 18 HOH HOH . 
L 5 HOH B 5 405 29 HOH HOH . 
M 5 HOH M 1 301 2 HOH HOH . 
M 5 HOH M 2 302 7 HOH HOH . 
M 5 HOH M 3 303 8 HOH HOH . 
M 5 HOH M 4 304 16 HOH HOH . 
M 5 HOH M 5 305 19 HOH HOH . 
M 5 HOH M 6 306 20 HOH HOH . 
N 5 HOH N 1 301 13 HOH HOH . 
N 5 HOH N 2 302 15 HOH HOH . 
N 5 HOH N 3 303 17 HOH HOH . 
N 5 HOH N 4 304 23 HOH HOH . 
N 5 HOH N 5 305 25 HOH HOH . 
N 5 HOH N 6 306 28 HOH HOH . 
N 5 HOH N 7 307 30 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . H 4 9.867 -12.885 69.261 1 47.97 ? C1 NAG 2061 B 1 
HETATM 2 C C2 NAG . . . H 4 9.039 -14.081 69.751 1 44.81 ? C2 NAG 2061 B 1 
HETATM 3 C C3 NAG . . . H 4 9.755 -14.846 70.86 1 42.6 ? C3 NAG 2061 B 1 
HETATM 4 C C4 NAG . . . H 4 11.152 -15.231 70.377 1 44.82 ? C4 NAG 2061 B 1 
HETATM 5 C C5 NAG . . . H 4 11.922 -14.001 69.893 1 44.53 ? C5 NAG 2061 B 1 
HETATM 6 C C6 NAG . . . H 4 13.259 -14.41 69.281 1 41.11 ? C6 NAG 2061 B 1 
HETATM 7 C C7 NAG . . . H 4 6.674 -13.603 69.389 1 46.55 ? C7 NAG 2061 B 1 
HETATM 8 C C8 NAG . . . H 4 5.368 -13.214 70.029 1 37.96 ? C8 NAG 2061 B 1 
HETATM 9 N N2 NAG . . . H 4 7.732 -13.642 70.208 1 45.54 ? N2 NAG 2061 B 1 
HETATM 10 O O3 NAG . . . H 4 9.008 -15.99 71.227 1 38.7 ? O3 NAG 2061 B 1 
HETATM 11 O O4 NAG . . . H 4 11.884 -15.867 71.409 1 41.22 ? O4 NAG 2061 B 1 
HETATM 12 O O5 NAG . . . H 4 11.198 -13.251 68.926 1 48.68 ? O5 NAG 2061 B 1 
HETATM 13 O O6 NAG . . . H 4 13.934 -13.265 68.802 1 49.08 ? O6 NAG 2061 B 1 
HETATM 14 O O7 NAG . . . H 4 6.732 -13.855 68.176 1 44.77 ? O7 NAG 2061 B 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           396 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#