data_4HCV # _model_server_result.job_id pB90385ZcfiWecakcmSBOw _model_server_result.datetime_utc '2024-10-12 12:25:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hcv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 4HCV # _exptl.entry_id 4HCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 511.618 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{4-amino-1-[(3S)-1-propanoylpiperidin-3-yl]-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-N-[4-(propan-2-yl)phenyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.57 _cell.angle_gamma 90 _cell.entry_id 4HCV _cell.length_a 37.36 _cell.length_b 67.83 _cell.length_c 49.09 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 91 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 442 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C25 _struct_conn.ptnr2_label_comp_id 13J _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 13J _struct_conn.ptnr2_auth_seq_id 701 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.849 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C29 H33 N7 O2' _chem_comp.formula_weight 511.618 _chem_comp.id 13J _chem_comp.mon_nstd_flag . _chem_comp.name 3-{4-amino-1-[(3S)-1-propanoylpiperidin-3-yl]-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-N-[4-(propan-2-yl)phenyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C29 13J sing 1 n n C29 C27 13J sing 2 n n C29 C13 13J sing 3 n n C5 C13 13J doub 4 n y C5 C7 13J sing 5 n y C13 C4 13J sing 6 n y C7 C14 13J doub 7 n y C4 C6 13J doub 8 n y C14 C6 13J sing 9 n y C14 N36 13J sing 10 n n N36 C18 13J sing 11 n n C3 C1 13J doub 12 n y C3 C12 13J sing 13 n y C18 C12 13J sing 14 n n C18 O37 13J doub 15 n n C1 C2 13J sing 16 n y C25 C28 13J sing 17 n n C12 C8 13J doub 18 n y C28 C19 13J sing 19 n n C2 C11 13J doub 20 n y C8 C11 13J sing 21 n y C11 C15 13J sing 22 n n C19 O38 13J doub 23 n n C19 N34 13J sing 24 n n N32 C15 13J doub 25 n y N32 N33 13J sing 26 n y C15 C10 13J sing 27 n y C23 N34 13J sing 28 n n C23 C24 13J sing 29 n n N34 C22 13J sing 30 n n N33 C24 13J sing 31 n n N33 C16 13J sing 32 n y C24 C21 13J sing 33 n n C10 C16 13J doub 34 n y C10 C17 13J sing 35 n y N35 C17 13J sing 36 n n C16 N30 13J sing 37 n y C17 N31 13J doub 38 n y C22 C20 13J sing 39 n n C21 C20 13J sing 40 n n N30 C9 13J doub 41 n y N31 C9 13J sing 42 n y C4 H1 13J sing 43 n n C7 H2 13J sing 44 n n C6 H3 13J sing 45 n n C9 H4 13J sing 46 n n C20 H5 13J sing 47 n n C20 H6 13J sing 48 n n C21 H7 13J sing 49 n n C21 H8 13J sing 50 n n C8 H9 13J sing 51 n n C26 H10 13J sing 52 n n C26 H11 13J sing 53 n n C26 H12 13J sing 54 n n C1 H13 13J sing 55 n n C2 H14 13J sing 56 n n C3 H15 13J sing 57 n n C5 H16 13J sing 58 n n C22 H17 13J sing 59 n n C22 H18 13J sing 60 n n C23 H19 13J sing 61 n n C23 H20 13J sing 62 n n C24 H21 13J sing 63 n n C25 H22 13J sing 64 n n C25 H23 13J sing 65 n n C25 H24 13J sing 66 n n C27 H25 13J sing 67 n n C27 H26 13J sing 68 n n C27 H27 13J sing 69 n n C28 H28 13J sing 70 n n C28 H29 13J sing 71 n n C29 H30 13J sing 72 n n N35 H31 13J sing 73 n n N35 H32 13J sing 74 n n N36 H33 13J sing 75 n n # _atom_sites.entry_id 4HCV _atom_sites.fract_transf_matrix[1][1] 0.026767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007458 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014743 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021147 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 13J A 1 701 999 13J PFE . C 3 HOH A 1 801 1 HOH HOH . C 3 HOH A 2 802 2 HOH HOH . C 3 HOH A 3 803 3 HOH HOH . C 3 HOH A 4 804 4 HOH HOH . C 3 HOH A 5 805 5 HOH HOH . C 3 HOH A 6 806 6 HOH HOH . C 3 HOH A 7 807 7 HOH HOH . C 3 HOH A 8 808 8 HOH HOH . C 3 HOH A 9 809 9 HOH HOH . C 3 HOH A 10 810 10 HOH HOH . C 3 HOH A 11 811 11 HOH HOH . C 3 HOH A 12 812 12 HOH HOH . C 3 HOH A 13 813 13 HOH HOH . C 3 HOH A 14 814 14 HOH HOH . C 3 HOH A 15 815 15 HOH HOH . C 3 HOH A 16 816 16 HOH HOH . C 3 HOH A 17 817 17 HOH HOH . C 3 HOH A 18 818 18 HOH HOH . C 3 HOH A 19 819 19 HOH HOH . C 3 HOH A 20 820 20 HOH HOH . C 3 HOH A 21 821 21 HOH HOH . C 3 HOH A 22 822 22 HOH HOH . C 3 HOH A 23 823 23 HOH HOH . C 3 HOH A 24 824 24 HOH HOH . C 3 HOH A 25 825 25 HOH HOH . C 3 HOH A 26 826 26 HOH HOH . C 3 HOH A 27 827 27 HOH HOH . C 3 HOH A 28 828 28 HOH HOH . C 3 HOH A 29 829 29 HOH HOH . C 3 HOH A 30 830 30 HOH HOH . C 3 HOH A 31 831 31 HOH HOH . C 3 HOH A 32 832 32 HOH HOH . C 3 HOH A 33 833 33 HOH HOH . C 3 HOH A 34 834 34 HOH HOH . C 3 HOH A 35 835 35 HOH HOH . C 3 HOH A 36 836 36 HOH HOH . C 3 HOH A 37 837 37 HOH HOH . C 3 HOH A 38 838 38 HOH HOH . C 3 HOH A 39 839 39 HOH HOH . C 3 HOH A 40 840 40 HOH HOH . C 3 HOH A 41 841 41 HOH HOH . C 3 HOH A 42 842 42 HOH HOH . C 3 HOH A 43 843 44 HOH HOH . C 3 HOH A 44 844 45 HOH HOH . C 3 HOH A 45 845 46 HOH HOH . C 3 HOH A 46 846 47 HOH HOH . C 3 HOH A 47 847 48 HOH HOH . C 3 HOH A 48 848 49 HOH HOH . C 3 HOH A 49 849 50 HOH HOH . C 3 HOH A 50 850 51 HOH HOH . C 3 HOH A 51 851 52 HOH HOH . C 3 HOH A 52 852 53 HOH HOH . C 3 HOH A 53 853 54 HOH HOH . C 3 HOH A 54 854 55 HOH HOH . C 3 HOH A 55 855 56 HOH HOH . C 3 HOH A 56 856 57 HOH HOH . C 3 HOH A 57 857 58 HOH HOH . C 3 HOH A 58 858 59 HOH HOH . C 3 HOH A 59 859 60 HOH HOH . C 3 HOH A 60 860 61 HOH HOH . C 3 HOH A 61 861 63 HOH HOH . C 3 HOH A 62 862 64 HOH HOH . C 3 HOH A 63 863 65 HOH HOH . C 3 HOH A 64 864 66 HOH HOH . C 3 HOH A 65 865 67 HOH HOH . C 3 HOH A 66 866 68 HOH HOH . C 3 HOH A 67 867 69 HOH HOH . C 3 HOH A 68 868 70 HOH HOH . C 3 HOH A 69 869 71 HOH HOH . C 3 HOH A 70 870 72 HOH HOH . C 3 HOH A 71 871 73 HOH HOH . C 3 HOH A 72 872 74 HOH HOH . C 3 HOH A 73 873 75 HOH HOH . C 3 HOH A 74 874 76 HOH HOH . C 3 HOH A 75 875 77 HOH HOH . C 3 HOH A 76 876 78 HOH HOH . C 3 HOH A 77 877 79 HOH HOH . C 3 HOH A 78 878 80 HOH HOH . C 3 HOH A 79 879 81 HOH HOH . C 3 HOH A 80 880 82 HOH HOH . C 3 HOH A 81 881 83 HOH HOH . C 3 HOH A 82 882 84 HOH HOH . C 3 HOH A 83 883 85 HOH HOH . C 3 HOH A 84 884 86 HOH HOH . C 3 HOH A 85 885 87 HOH HOH . C 3 HOH A 86 886 88 HOH HOH . C 3 HOH A 87 887 89 HOH HOH . C 3 HOH A 88 888 90 HOH HOH . C 3 HOH A 89 889 91 HOH HOH . C 3 HOH A 90 890 92 HOH HOH . C 3 HOH A 91 891 93 HOH HOH . C 3 HOH A 92 892 94 HOH HOH . C 3 HOH A 93 893 95 HOH HOH . C 3 HOH A 94 894 96 HOH HOH . C 3 HOH A 95 895 97 HOH HOH . C 3 HOH A 96 896 98 HOH HOH . C 3 HOH A 97 897 99 HOH HOH . C 3 HOH A 98 898 100 HOH HOH . C 3 HOH A 99 899 101 HOH HOH . C 3 HOH A 100 900 102 HOH HOH . C 3 HOH A 101 901 103 HOH HOH . C 3 HOH A 102 902 104 HOH HOH . C 3 HOH A 103 903 105 HOH HOH . C 3 HOH A 104 904 106 HOH HOH . C 3 HOH A 105 905 107 HOH HOH . C 3 HOH A 106 906 108 HOH HOH . C 3 HOH A 107 907 109 HOH HOH . C 3 HOH A 108 908 110 HOH HOH . C 3 HOH A 109 909 111 HOH HOH . C 3 HOH A 110 910 112 HOH HOH . C 3 HOH A 111 911 113 HOH HOH . C 3 HOH A 112 912 114 HOH HOH . C 3 HOH A 113 913 115 HOH HOH . C 3 HOH A 114 914 116 HOH HOH . C 3 HOH A 115 915 117 HOH HOH . C 3 HOH A 116 916 118 HOH HOH . C 3 HOH A 117 917 119 HOH HOH . C 3 HOH A 118 918 120 HOH HOH . C 3 HOH A 119 919 121 HOH HOH . C 3 HOH A 120 920 122 HOH HOH . C 3 HOH A 121 921 123 HOH HOH . C 3 HOH A 122 922 124 HOH HOH . C 3 HOH A 123 923 125 HOH HOH . C 3 HOH A 124 924 126 HOH HOH . C 3 HOH A 125 925 127 HOH HOH . C 3 HOH A 126 926 128 HOH HOH . C 3 HOH A 127 927 129 HOH HOH . C 3 HOH A 128 928 130 HOH HOH . C 3 HOH A 129 929 131 HOH HOH . C 3 HOH A 130 930 132 HOH HOH . C 3 HOH A 131 931 133 HOH HOH . C 3 HOH A 132 932 134 HOH HOH . C 3 HOH A 133 933 135 HOH HOH . C 3 HOH A 134 934 136 HOH HOH . C 3 HOH A 135 935 137 HOH HOH . C 3 HOH A 136 936 139 HOH HOH . C 3 HOH A 137 937 141 HOH HOH . C 3 HOH A 138 938 142 HOH HOH . C 3 HOH A 139 939 143 HOH HOH . C 3 HOH A 140 940 144 HOH HOH . C 3 HOH A 141 941 145 HOH HOH . C 3 HOH A 142 942 146 HOH HOH . C 3 HOH A 143 943 147 HOH HOH . C 3 HOH A 144 944 148 HOH HOH . C 3 HOH A 145 945 149 HOH HOH . C 3 HOH A 146 946 150 HOH HOH . C 3 HOH A 147 947 151 HOH HOH . C 3 HOH A 148 948 152 HOH HOH . C 3 HOH A 149 949 153 HOH HOH . C 3 HOH A 150 950 154 HOH HOH . C 3 HOH A 151 951 155 HOH HOH . C 3 HOH A 152 952 156 HOH HOH . C 3 HOH A 153 953 157 HOH HOH . C 3 HOH A 154 954 158 HOH HOH . C 3 HOH A 155 955 159 HOH HOH . C 3 HOH A 156 956 160 HOH HOH . C 3 HOH A 157 957 161 HOH HOH . C 3 HOH A 158 958 162 HOH HOH . C 3 HOH A 159 959 163 HOH HOH . C 3 HOH A 160 960 164 HOH HOH . C 3 HOH A 161 961 165 HOH HOH . C 3 HOH A 162 962 166 HOH HOH . C 3 HOH A 163 963 167 HOH HOH . C 3 HOH A 164 964 168 HOH HOH . C 3 HOH A 165 965 169 HOH HOH . C 3 HOH A 166 966 170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 13J . . . B 2 1.413 13.396 15.887 1 15.18 ? C4 13J 701 A 1 HETATM 2 C C7 13J . . . B 2 2.633 11.152 14.842 1 15.38 ? C7 13J 701 A 1 HETATM 3 C C6 13J . . . B 2 1.294 12.196 16.549 1 15.97 ? C6 13J 701 A 1 HETATM 4 C C9 13J . . . B 2 4.316 3.52 24.075 1 12.84 ? C9 13J 701 A 1 HETATM 5 C C13 13J . . . B 2 2.122 13.484 14.709 1 16.65 ? C13 13J 701 A 1 HETATM 6 C C20 13J . . . B 2 9.176 6.519 23.353 1 16.63 ? C20 13J 701 A 1 HETATM 7 C C21 13J . . . B 2 7.662 6.39 23.319 1 15.03 ? C21 13J 701 A 1 HETATM 8 C C8 13J . . . B 2 2.867 7.835 19.502 1 11.16 ? C8 13J 701 A 1 HETATM 9 C C18 13J . . . B 2 2.131 9.647 18.006 1 14.61 ? C18 13J 701 A 1 HETATM 10 C C16 13J . . . B 2 4.93 5.008 22.559 1 12.39 ? C16 13J 701 A 1 HETATM 11 C C19 13J . . . B 2 10.279 5.498 20.408 1 22.12 ? C19 13J 701 A 1 HETATM 12 C C26 13J . . . B 2 1.485 14.831 12.679 1 16.3 ? C26 13J 701 A 1 HETATM 13 C C1 13J . . . B 2 1.025 6.1 18.383 1 11.81 ? C1 13J 701 A 1 HETATM 14 C C2 13J . . . B 2 1.897 5.666 19.366 1 13.4 ? C2 13J 701 A 1 HETATM 15 C C3 13J . . . B 2 1.095 7.401 17.917 1 12.13 ? C3 13J 701 A 1 HETATM 16 C C5 13J . . . B 2 2.733 12.361 14.17 1 14.7 ? C5 13J 701 A 1 HETATM 17 C C10 13J . . . B 2 3.657 5.11 22.028 1 11.31 ? C10 13J 701 A 1 HETATM 18 C C11 13J . . . B 2 2.822 6.517 19.951 1 11.08 ? C11 13J 701 A 1 HETATM 19 C C12 13J . . . B 2 2.012 8.268 18.496 1 11.64 ? C12 13J 701 A 1 HETATM 20 C C14 13J . . . B 2 1.92 11.078 16.025 1 15.52 ? C14 13J 701 A 1 HETATM 21 C C15 13J . . . B 2 3.765 6.039 20.949 1 12.88 ? C15 13J 701 A 1 HETATM 22 C C17 13J . . . B 2 2.687 4.313 22.624 1 10.79 ? C17 13J 701 A 1 HETATM 23 C C22 13J . . . B 2 9.827 5.288 22.758 1 17.83 ? C22 13J 701 A 1 HETATM 24 C C23 13J . . . B 2 7.934 4.938 21.244 1 14.63 ? C23 13J 701 A 1 HETATM 25 C C24 13J . . . B 2 7.156 6.08 21.911 1 12.91 ? C24 13J 701 A 1 HETATM 26 C C25 13J . . . B 2 10.806 4.269 18.442 1 18.29 ? C25 13J 701 A 1 HETATM 27 C C27 13J . . . B 2 3.351 15.655 14.186 1 21.26 ? C27 13J 701 A 1 HETATM 28 C C28 13J . . . B 2 9.817 5.288 19.005 1 19.56 ? C28 13J 701 A 1 HETATM 29 C C29 13J . . . B 2 2.102 14.833 14.062 1 20.69 ? C29 13J 701 A 1 HETATM 30 N N30 13J . . . B 2 5.335 4.221 23.571 1 12.25 ? N30 13J 701 A 1 HETATM 31 N N31 13J . . . B 2 3.038 3.523 23.66 1 11.82 ? N31 13J 701 A 1 HETATM 32 N N32 13J . . . B 2 5.028 6.463 20.863 1 12.92 ? N32 13J 701 A 1 HETATM 33 N N33 13J . . . B 2 5.722 5.854 21.837 1 13.35 ? N33 13J 701 A 1 HETATM 34 N N34 13J . . . B 2 9.377 5.141 21.398 1 16.95 ? N34 13J 701 A 1 HETATM 35 N N35 13J . . . B 2 1.351 4.34 22.232 1 11.57 ? N35 13J 701 A 1 HETATM 36 N N36 13J . . . B 2 1.786 9.841 16.692 1 13.9 ? N36 13J 701 A 1 HETATM 37 O O37 13J . . . B 2 2.537 10.529 18.75 1 14.96 ? O37 13J 701 A 1 HETATM 38 O O38 13J . . . B 2 11.421 5.911 20.614 1 23.35 ? O38 13J 701 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #