data_4HD8 # _model_server_result.job_id lyukYNjQD2bJhqwT5g0GzQ _model_server_result.datetime_utc '2024-11-25 13:43:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hd8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4HD8 # _exptl.entry_id 4HD8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HD8 _cell.length_a 114.6 _cell.length_b 114.6 _cell.length_c 123.7 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HD8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 141 A CYS 256 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc2 A SG CYS 144 A CYS 259 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc3 A SG CYS 165 A CYS 280 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc4 A SG CYS 168 A CYS 283 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4HD8 _atom_sites.fract_transf_matrix[1][1] 0.008726 _atom_sites.fract_transf_matrix[1][2] 0.005038 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 1 ZN ZN . D 4 PIT A 1 402 2 PIT PIT . E 5 IPA A 1 403 3 IPA IPA . F 6 HOH A 1 501 1 HOH HOH . F 6 HOH A 2 502 2 HOH HOH . F 6 HOH A 3 503 3 HOH HOH . F 6 HOH A 4 504 4 HOH HOH . F 6 HOH A 5 505 5 HOH HOH . F 6 HOH A 6 506 6 HOH HOH . F 6 HOH A 7 507 7 HOH HOH . F 6 HOH A 8 508 8 HOH HOH . F 6 HOH A 9 509 9 HOH HOH . F 6 HOH A 10 510 10 HOH HOH . F 6 HOH A 11 511 11 HOH HOH . F 6 HOH A 12 512 12 HOH HOH . F 6 HOH A 13 513 13 HOH HOH . F 6 HOH A 14 514 14 HOH HOH . F 6 HOH A 15 515 15 HOH HOH . F 6 HOH A 16 516 16 HOH HOH . F 6 HOH A 17 517 17 HOH HOH . F 6 HOH A 18 518 18 HOH HOH . F 6 HOH A 19 519 19 HOH HOH . F 6 HOH A 20 520 20 HOH HOH . F 6 HOH A 21 521 21 HOH HOH . F 6 HOH A 22 522 23 HOH HOH . F 6 HOH A 23 523 24 HOH HOH . F 6 HOH A 24 524 25 HOH HOH . F 6 HOH A 25 525 26 HOH HOH . F 6 HOH A 26 526 27 HOH HOH . F 6 HOH A 27 528 29 HOH HOH . F 6 HOH A 28 529 30 HOH HOH . F 6 HOH A 29 530 31 HOH HOH . F 6 HOH A 30 531 32 HOH HOH . F 6 HOH A 31 532 33 HOH HOH . F 6 HOH A 32 533 34 HOH HOH . F 6 HOH A 33 534 35 HOH HOH . F 6 HOH A 34 535 36 HOH HOH . F 6 HOH A 35 536 37 HOH HOH . F 6 HOH A 36 537 38 HOH HOH . F 6 HOH A 37 538 39 HOH HOH . F 6 HOH A 38 539 40 HOH HOH . F 6 HOH A 39 540 41 HOH HOH . F 6 HOH A 40 541 42 HOH HOH . F 6 HOH A 41 542 43 HOH HOH . F 6 HOH A 42 543 44 HOH HOH . F 6 HOH A 43 544 45 HOH HOH . F 6 HOH A 44 545 46 HOH HOH . F 6 HOH A 45 546 47 HOH HOH . F 6 HOH A 46 547 48 HOH HOH . F 6 HOH A 47 548 49 HOH HOH . F 6 HOH A 48 549 50 HOH HOH . F 6 HOH A 49 550 51 HOH HOH . F 6 HOH A 50 551 52 HOH HOH . F 6 HOH A 51 552 53 HOH HOH . F 6 HOH A 52 553 54 HOH HOH . F 6 HOH A 53 554 55 HOH HOH . F 6 HOH A 54 555 56 HOH HOH . F 6 HOH A 55 556 57 HOH HOH . F 6 HOH A 56 557 58 HOH HOH . F 6 HOH A 57 558 59 HOH HOH . F 6 HOH A 58 559 60 HOH HOH . F 6 HOH A 59 560 61 HOH HOH . F 6 HOH A 60 561 62 HOH HOH . F 6 HOH A 61 562 63 HOH HOH . F 6 HOH A 62 563 64 HOH HOH . F 6 HOH A 63 564 65 HOH HOH . F 6 HOH A 64 565 66 HOH HOH . F 6 HOH A 65 566 67 HOH HOH . F 6 HOH A 66 567 68 HOH HOH . F 6 HOH A 67 568 69 HOH HOH . F 6 HOH A 68 569 70 HOH HOH . F 6 HOH A 69 570 71 HOH HOH . F 6 HOH A 70 571 72 HOH HOH . F 6 HOH A 71 572 73 HOH HOH . F 6 HOH A 72 573 74 HOH HOH . F 6 HOH A 73 574 75 HOH HOH . F 6 HOH A 74 575 76 HOH HOH . F 6 HOH A 75 576 77 HOH HOH . F 6 HOH A 76 577 78 HOH HOH . F 6 HOH A 77 578 80 HOH HOH . F 6 HOH A 78 579 81 HOH HOH . F 6 HOH A 79 580 82 HOH HOH . F 6 HOH A 80 581 84 HOH HOH . F 6 HOH A 81 582 85 HOH HOH . F 6 HOH A 82 583 86 HOH HOH . F 6 HOH A 83 584 87 HOH HOH . F 6 HOH A 84 585 88 HOH HOH . F 6 HOH A 85 586 89 HOH HOH . F 6 HOH A 86 587 90 HOH HOH . F 6 HOH A 87 588 91 HOH HOH . F 6 HOH A 88 589 92 HOH HOH . F 6 HOH A 89 590 93 HOH HOH . F 6 HOH A 90 591 95 HOH HOH . F 6 HOH A 91 592 96 HOH HOH . F 6 HOH A 92 593 97 HOH HOH . F 6 HOH A 93 594 98 HOH HOH . F 6 HOH A 94 595 99 HOH HOH . F 6 HOH A 95 596 100 HOH HOH . F 6 HOH A 96 597 101 HOH HOH . F 6 HOH A 97 598 102 HOH HOH . F 6 HOH A 98 599 103 HOH HOH . F 6 HOH A 99 600 104 HOH HOH . G 6 HOH F 1 101 79 HOH HOH . G 6 HOH F 2 102 83 HOH HOH . G 6 HOH F 3 103 94 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.671 _atom_site.Cartn_y 4.967 _atom_site.Cartn_z 14.021 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #