data_4HD8 # _model_server_result.job_id IPqX8MNcJM2z3ExMN-BZnA _model_server_result.datetime_utc '2024-11-06 00:49:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hd8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 4HD8 # _exptl.entry_id 4HD8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.095 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HD8 _cell.length_a 114.6 _cell.length_b 114.6 _cell.length_c 123.7 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HD8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 141 A CYS 256 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc2 A SG CYS 144 A CYS 259 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc3 A SG CYS 165 A CYS 280 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc4 A SG CYS 168 A CYS 283 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPA sing 222 n n C1 H11 IPA sing 223 n n C1 H12 IPA sing 224 n n C1 H13 IPA sing 225 n n C2 C3 IPA sing 226 n n C2 O2 IPA sing 227 n n C2 H2 IPA sing 228 n n C3 H31 IPA sing 229 n n C3 H32 IPA sing 230 n n C3 H33 IPA sing 231 n n O2 HO2 IPA sing 232 n n # _atom_sites.entry_id 4HD8 _atom_sites.fract_transf_matrix[1][1] 0.008726 _atom_sites.fract_transf_matrix[1][2] 0.005038 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 1 ZN ZN . D 4 PIT A 1 402 2 PIT PIT . E 5 IPA A 1 403 3 IPA IPA . F 6 HOH A 1 501 1 HOH HOH . F 6 HOH A 2 502 2 HOH HOH . F 6 HOH A 3 503 3 HOH HOH . F 6 HOH A 4 504 4 HOH HOH . F 6 HOH A 5 505 5 HOH HOH . F 6 HOH A 6 506 6 HOH HOH . F 6 HOH A 7 507 7 HOH HOH . F 6 HOH A 8 508 8 HOH HOH . F 6 HOH A 9 509 9 HOH HOH . F 6 HOH A 10 510 10 HOH HOH . F 6 HOH A 11 511 11 HOH HOH . F 6 HOH A 12 512 12 HOH HOH . F 6 HOH A 13 513 13 HOH HOH . F 6 HOH A 14 514 14 HOH HOH . F 6 HOH A 15 515 15 HOH HOH . F 6 HOH A 16 516 16 HOH HOH . F 6 HOH A 17 517 17 HOH HOH . F 6 HOH A 18 518 18 HOH HOH . F 6 HOH A 19 519 19 HOH HOH . F 6 HOH A 20 520 20 HOH HOH . F 6 HOH A 21 521 21 HOH HOH . F 6 HOH A 22 522 23 HOH HOH . F 6 HOH A 23 523 24 HOH HOH . F 6 HOH A 24 524 25 HOH HOH . F 6 HOH A 25 525 26 HOH HOH . F 6 HOH A 26 526 27 HOH HOH . F 6 HOH A 27 528 29 HOH HOH . F 6 HOH A 28 529 30 HOH HOH . F 6 HOH A 29 530 31 HOH HOH . F 6 HOH A 30 531 32 HOH HOH . F 6 HOH A 31 532 33 HOH HOH . F 6 HOH A 32 533 34 HOH HOH . F 6 HOH A 33 534 35 HOH HOH . F 6 HOH A 34 535 36 HOH HOH . F 6 HOH A 35 536 37 HOH HOH . F 6 HOH A 36 537 38 HOH HOH . F 6 HOH A 37 538 39 HOH HOH . F 6 HOH A 38 539 40 HOH HOH . F 6 HOH A 39 540 41 HOH HOH . F 6 HOH A 40 541 42 HOH HOH . F 6 HOH A 41 542 43 HOH HOH . F 6 HOH A 42 543 44 HOH HOH . F 6 HOH A 43 544 45 HOH HOH . F 6 HOH A 44 545 46 HOH HOH . F 6 HOH A 45 546 47 HOH HOH . F 6 HOH A 46 547 48 HOH HOH . F 6 HOH A 47 548 49 HOH HOH . F 6 HOH A 48 549 50 HOH HOH . F 6 HOH A 49 550 51 HOH HOH . F 6 HOH A 50 551 52 HOH HOH . F 6 HOH A 51 552 53 HOH HOH . F 6 HOH A 52 553 54 HOH HOH . F 6 HOH A 53 554 55 HOH HOH . F 6 HOH A 54 555 56 HOH HOH . F 6 HOH A 55 556 57 HOH HOH . F 6 HOH A 56 557 58 HOH HOH . F 6 HOH A 57 558 59 HOH HOH . F 6 HOH A 58 559 60 HOH HOH . F 6 HOH A 59 560 61 HOH HOH . F 6 HOH A 60 561 62 HOH HOH . F 6 HOH A 61 562 63 HOH HOH . F 6 HOH A 62 563 64 HOH HOH . F 6 HOH A 63 564 65 HOH HOH . F 6 HOH A 64 565 66 HOH HOH . F 6 HOH A 65 566 67 HOH HOH . F 6 HOH A 66 567 68 HOH HOH . F 6 HOH A 67 568 69 HOH HOH . F 6 HOH A 68 569 70 HOH HOH . F 6 HOH A 69 570 71 HOH HOH . F 6 HOH A 70 571 72 HOH HOH . F 6 HOH A 71 572 73 HOH HOH . F 6 HOH A 72 573 74 HOH HOH . F 6 HOH A 73 574 75 HOH HOH . F 6 HOH A 74 575 76 HOH HOH . F 6 HOH A 75 576 77 HOH HOH . F 6 HOH A 76 577 78 HOH HOH . F 6 HOH A 77 578 80 HOH HOH . F 6 HOH A 78 579 81 HOH HOH . F 6 HOH A 79 580 82 HOH HOH . F 6 HOH A 80 581 84 HOH HOH . F 6 HOH A 81 582 85 HOH HOH . F 6 HOH A 82 583 86 HOH HOH . F 6 HOH A 83 584 87 HOH HOH . F 6 HOH A 84 585 88 HOH HOH . F 6 HOH A 85 586 89 HOH HOH . F 6 HOH A 86 587 90 HOH HOH . F 6 HOH A 87 588 91 HOH HOH . F 6 HOH A 88 589 92 HOH HOH . F 6 HOH A 89 590 93 HOH HOH . F 6 HOH A 90 591 95 HOH HOH . F 6 HOH A 91 592 96 HOH HOH . F 6 HOH A 92 593 97 HOH HOH . F 6 HOH A 93 594 98 HOH HOH . F 6 HOH A 94 595 99 HOH HOH . F 6 HOH A 95 596 100 HOH HOH . F 6 HOH A 96 597 101 HOH HOH . F 6 HOH A 97 598 102 HOH HOH . F 6 HOH A 98 599 103 HOH HOH . F 6 HOH A 99 600 104 HOH HOH . G 6 HOH F 1 101 79 HOH HOH . G 6 HOH F 2 102 83 HOH HOH . G 6 HOH F 3 103 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . E 5 15.45 23.638 0.379 0.5 13.7 ? C1 IPA 403 A 1 HETATM 2 C C2 IPA . . . E 5 13.92 23.665 0.378 0.5 14.32 ? C2 IPA 403 A 1 HETATM 3 C C3 IPA . . . E 5 13.396 25.109 0.268 0.5 14.04 ? C3 IPA 403 A 1 HETATM 4 O O2 IPA . . . E 5 13.439 22.828 -0.694 0.5 13.68 ? O2 IPA 403 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #