data_4HFC # _model_server_result.job_id tQuRhIJGl0TJLyISBgZJ2A _model_server_result.datetime_utc '2024-11-27 12:13:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hfc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":407}' # _entry.id 4HFC # _exptl.entry_id 4HFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.22 _cell.angle_gamma 90 _cell.entry_id 4HFC _cell.length_a 180.88 _cell.length_b 133.14 _cell.length_c 159.35 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 S N N ? 5 Y N N ? 5 EA N N ? 5 LA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PRO 68 A PRO 68 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? metalc ? metalc2 A O ILE 71 A ILE 71 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc3 B O PRO 68 B PRO 68 1_555 S NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.002 ? metalc ? metalc4 B O ILE 71 B ILE 71 1_555 S NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc5 C O ILE 71 C ILE 71 1_555 Y NA NA . C NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc6 D O PRO 68 D PRO 68 1_555 EA NA NA . D NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.197 ? metalc ? metalc7 D O ILE 71 D ILE 71 1_555 EA NA NA . D NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc8 E O PRO 68 E PRO 68 1_555 LA NA NA . E NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc9 E O ILE 71 E ILE 71 1_555 LA NA NA . E NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4HFC _atom_sites.fract_transf_matrix[1][1] 0.005529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001197 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LMT A 1 401 5 LMT LMT . G 3 BRJ A 1 402 1 BRJ BRJ . H 4 CL A 1 403 4 CL CL . I 4 CL A 1 404 6 CL CL . J 4 CL A 1 405 7 CL CL . K 5 NA A 1 406 1 NA NA . L 5 NA A 1 407 3 NA NA . M 6 PLC A 1 408 1 PLC PLC . N 2 LMT B 1 401 6 LMT LMT . O 4 CL B 1 402 5 CL CL . P 3 BRJ B 1 403 1 BRJ BRJ . Q 7 ACT B 1 404 1 ACT ACT . R 7 ACT B 1 405 3 ACT ACT . S 5 NA B 1 406 2 NA NA . T 6 PLC B 1 407 2 PLC PLC . U 2 LMT C 1 401 1 LMT LMT . V 2 LMT C 1 402 4 LMT LMT . W 4 CL C 1 403 1 CL CL . X 3 BRJ C 1 404 1 BRJ BRJ . Y 5 NA C 1 405 6 NA NA . Z 6 PLC C 1 406 3 PLC PLC . AA 2 LMT D 1 401 2 LMT LMT . BA 4 CL D 1 402 2 CL CL . CA 7 ACT D 1 403 4 ACT ACT . DA 3 BRJ D 1 404 1 BRJ BRJ . EA 5 NA D 1 405 5 NA NA . FA 6 PLC D 1 406 4 PLC PLC . GA 2 LMT E 1 401 3 LMT LMT . HA 4 CL E 1 402 3 CL CL . IA 7 ACT E 1 403 2 ACT ACT . JA 7 ACT E 1 404 5 ACT ACT . KA 3 BRJ E 1 405 1 BRJ BRJ . LA 5 NA E 1 406 4 NA NA . MA 6 PLC E 1 407 5 PLC PLC . NA 8 HOH A 1 501 1 HOH HOH . NA 8 HOH A 2 502 3 HOH HOH . NA 8 HOH A 3 503 6 HOH HOH . NA 8 HOH A 4 504 26 HOH HOH . NA 8 HOH A 5 505 29 HOH HOH . NA 8 HOH A 6 506 34 HOH HOH . NA 8 HOH A 7 507 49 HOH HOH . NA 8 HOH A 8 508 50 HOH HOH . NA 8 HOH A 9 509 56 HOH HOH . NA 8 HOH A 10 510 60 HOH HOH . NA 8 HOH A 11 511 62 HOH HOH . NA 8 HOH A 12 512 81 HOH HOH . NA 8 HOH A 13 513 89 HOH HOH . NA 8 HOH A 14 514 90 HOH HOH . NA 8 HOH A 15 515 91 HOH HOH . NA 8 HOH A 16 516 92 HOH HOH . OA 8 HOH B 1 501 4 HOH HOH . OA 8 HOH B 2 502 8 HOH HOH . OA 8 HOH B 3 503 12 HOH HOH . OA 8 HOH B 4 504 13 HOH HOH . OA 8 HOH B 5 505 16 HOH HOH . OA 8 HOH B 6 506 21 HOH HOH . OA 8 HOH B 7 507 23 HOH HOH . OA 8 HOH B 8 508 33 HOH HOH . OA 8 HOH B 9 509 39 HOH HOH . OA 8 HOH B 10 510 42 HOH HOH . OA 8 HOH B 11 511 43 HOH HOH . OA 8 HOH B 12 512 46 HOH HOH . OA 8 HOH B 13 513 48 HOH HOH . OA 8 HOH B 14 514 54 HOH HOH . OA 8 HOH B 15 515 59 HOH HOH . OA 8 HOH B 16 516 64 HOH HOH . OA 8 HOH B 17 517 67 HOH HOH . OA 8 HOH B 18 518 70 HOH HOH . OA 8 HOH B 19 519 76 HOH HOH . OA 8 HOH B 20 520 83 HOH HOH . OA 8 HOH B 21 521 85 HOH HOH . PA 8 HOH C 1 501 7 HOH HOH . PA 8 HOH C 2 502 9 HOH HOH . PA 8 HOH C 3 503 15 HOH HOH . PA 8 HOH C 4 504 20 HOH HOH . PA 8 HOH C 5 505 24 HOH HOH . PA 8 HOH C 6 506 25 HOH HOH . PA 8 HOH C 7 507 27 HOH HOH . PA 8 HOH C 8 508 28 HOH HOH . PA 8 HOH C 9 509 31 HOH HOH . PA 8 HOH C 10 510 44 HOH HOH . PA 8 HOH C 11 511 45 HOH HOH . PA 8 HOH C 12 512 57 HOH HOH . PA 8 HOH C 13 513 63 HOH HOH . PA 8 HOH C 14 514 65 HOH HOH . PA 8 HOH C 15 515 66 HOH HOH . PA 8 HOH C 16 516 75 HOH HOH . PA 8 HOH C 17 517 84 HOH HOH . PA 8 HOH C 18 518 86 HOH HOH . PA 8 HOH C 19 519 94 HOH HOH . QA 8 HOH D 1 501 2 HOH HOH . QA 8 HOH D 2 502 5 HOH HOH . QA 8 HOH D 3 503 17 HOH HOH . QA 8 HOH D 4 504 18 HOH HOH . QA 8 HOH D 5 505 19 HOH HOH . QA 8 HOH D 6 506 30 HOH HOH . QA 8 HOH D 7 507 38 HOH HOH . QA 8 HOH D 8 508 40 HOH HOH . QA 8 HOH D 9 509 47 HOH HOH . QA 8 HOH D 10 510 51 HOH HOH . QA 8 HOH D 11 511 52 HOH HOH . QA 8 HOH D 12 512 53 HOH HOH . QA 8 HOH D 13 513 58 HOH HOH . QA 8 HOH D 14 514 61 HOH HOH . QA 8 HOH D 15 515 73 HOH HOH . QA 8 HOH D 16 516 74 HOH HOH . QA 8 HOH D 17 517 77 HOH HOH . QA 8 HOH D 18 518 78 HOH HOH . QA 8 HOH D 19 519 80 HOH HOH . QA 8 HOH D 20 520 82 HOH HOH . QA 8 HOH D 21 521 87 HOH HOH . QA 8 HOH D 22 522 93 HOH HOH . RA 8 HOH E 1 501 10 HOH HOH . RA 8 HOH E 2 502 11 HOH HOH . RA 8 HOH E 3 503 14 HOH HOH . RA 8 HOH E 4 504 22 HOH HOH . RA 8 HOH E 5 505 32 HOH HOH . RA 8 HOH E 6 506 35 HOH HOH . RA 8 HOH E 7 507 36 HOH HOH . RA 8 HOH E 8 508 37 HOH HOH . RA 8 HOH E 9 509 41 HOH HOH . RA 8 HOH E 10 510 55 HOH HOH . RA 8 HOH E 11 511 68 HOH HOH . RA 8 HOH E 12 512 69 HOH HOH . RA 8 HOH E 13 513 71 HOH HOH . RA 8 HOH E 14 514 72 HOH HOH . RA 8 HOH E 15 515 79 HOH HOH . RA 8 HOH E 16 516 88 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x 27.125 _atom_site.Cartn_y -10.359 _atom_site.Cartn_z -2.727 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.1 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 407 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #