data_4HGL # _model_server_result.job_id r4R1kLnFxcS6j7YFdU_-9w _model_server_result.datetime_utc '2024-10-12 00:22:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hgl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4HGL # _exptl.entry_id 4HGL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.392 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[5-methoxy-2-(quinolin-3-yl)pyrimidin-4-yl]-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HGL _cell.length_a 57.439 _cell.length_b 57.439 _cell.length_c 223.416 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HGL _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H17 N5 O2' _chem_comp.formula_weight 371.392 _chem_comp.id 0YO _chem_comp.mon_nstd_flag . _chem_comp.name 2-[5-methoxy-2-(quinolin-3-yl)pyrimidin-4-yl]-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 N5 0YO sing 1 n n C19 C20 0YO sing 2 n n N5 C18 0YO sing 3 n n C20 C16 0YO sing 4 n n C18 O1 0YO doub 5 n n C18 C17 0YO sing 6 n n C16 C17 0YO doub 7 n y C16 N4 0YO sing 8 n y C17 C15 0YO sing 9 n y N4 C14 0YO sing 10 n y C15 C14 0YO doub 11 n y C14 C4 0YO sing 12 n n C13 C12 0YO doub 13 n y C13 C8 0YO sing 14 n y C4 N2 0YO doub 15 n y C4 C3 0YO sing 16 n y N2 C1 0YO sing 17 n y C12 C11 0YO sing 18 n y C7 C8 0YO doub 19 n y C7 C5 0YO sing 20 n y C8 C9 0YO sing 21 n y O2 C3 0YO sing 22 n n O2 C21 0YO sing 23 n n C3 C2 0YO doub 24 n y C1 C5 0YO sing 25 n n C1 N1 0YO doub 26 n y C11 C10 0YO doub 27 n y C5 C6 0YO doub 28 n y C9 C10 0YO sing 29 n y C9 N3 0YO doub 30 n y C2 N1 0YO sing 31 n y C6 N3 0YO sing 32 n y C2 H1 0YO sing 33 n n C7 H2 0YO sing 34 n n C10 H3 0YO sing 35 n n C11 H4 0YO sing 36 n n C12 H5 0YO sing 37 n n C13 H6 0YO sing 38 n n C15 H7 0YO sing 39 n n C19 H8 0YO sing 40 n n C20 H9 0YO sing 41 n n C20 H10 0YO sing 42 n n C21 H11 0YO sing 43 n n C21 H12 0YO sing 44 n n C21 H13 0YO sing 45 n n N4 H14 0YO sing 46 n n C6 H15 0YO sing 47 n n C19 H16 0YO sing 48 n n N5 H17 0YO sing 49 n n # _atom_sites.entry_id 4HGL _atom_sites.fract_transf_matrix[1][1] 0.01741 _atom_sites.fract_transf_matrix[1][2] 0.010052 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0YO A 1 401 1 0YO 0YO . C 3 SO4 A 1 402 1 SO4 SO4 . D 4 HOH A 1 501 3 HOH HOH . D 4 HOH A 2 502 4 HOH HOH . D 4 HOH A 3 503 6 HOH HOH . D 4 HOH A 4 504 7 HOH HOH . D 4 HOH A 5 505 9 HOH HOH . D 4 HOH A 6 506 10 HOH HOH . D 4 HOH A 7 507 11 HOH HOH . D 4 HOH A 8 508 12 HOH HOH . D 4 HOH A 9 509 13 HOH HOH . D 4 HOH A 10 510 15 HOH HOH . D 4 HOH A 11 511 16 HOH HOH . D 4 HOH A 12 512 17 HOH HOH . D 4 HOH A 13 513 18 HOH HOH . D 4 HOH A 14 514 19 HOH HOH . D 4 HOH A 15 515 21 HOH HOH . D 4 HOH A 16 516 22 HOH HOH . D 4 HOH A 17 517 23 HOH HOH . D 4 HOH A 18 518 24 HOH HOH . D 4 HOH A 19 519 25 HOH HOH . D 4 HOH A 20 520 26 HOH HOH . D 4 HOH A 21 521 27 HOH HOH . D 4 HOH A 22 522 28 HOH HOH . D 4 HOH A 23 523 30 HOH HOH . D 4 HOH A 24 524 32 HOH HOH . D 4 HOH A 25 525 34 HOH HOH . D 4 HOH A 26 526 35 HOH HOH . D 4 HOH A 27 527 36 HOH HOH . D 4 HOH A 28 528 39 HOH HOH . D 4 HOH A 29 529 40 HOH HOH . D 4 HOH A 30 530 41 HOH HOH . D 4 HOH A 31 531 42 HOH HOH . D 4 HOH A 32 532 44 HOH HOH . D 4 HOH A 33 533 45 HOH HOH . D 4 HOH A 34 534 48 HOH HOH . D 4 HOH A 35 535 50 HOH HOH . D 4 HOH A 36 536 52 HOH HOH . D 4 HOH A 37 537 53 HOH HOH . D 4 HOH A 38 538 54 HOH HOH . D 4 HOH A 39 539 55 HOH HOH . D 4 HOH A 40 540 56 HOH HOH . D 4 HOH A 41 541 57 HOH HOH . D 4 HOH A 42 542 58 HOH HOH . D 4 HOH A 43 543 64 HOH HOH . D 4 HOH A 44 544 69 HOH HOH . D 4 HOH A 45 545 70 HOH HOH . D 4 HOH A 46 546 71 HOH HOH . D 4 HOH A 47 547 72 HOH HOH . D 4 HOH A 48 548 73 HOH HOH . D 4 HOH A 49 549 75 HOH HOH . D 4 HOH A 50 550 76 HOH HOH . D 4 HOH A 51 551 77 HOH HOH . D 4 HOH A 52 552 78 HOH HOH . D 4 HOH A 53 553 79 HOH HOH . D 4 HOH A 54 554 81 HOH HOH . D 4 HOH A 55 555 82 HOH HOH . D 4 HOH A 56 556 84 HOH HOH . D 4 HOH A 57 557 85 HOH HOH . D 4 HOH A 58 558 88 HOH HOH . D 4 HOH A 59 559 89 HOH HOH . D 4 HOH A 60 560 90 HOH HOH . D 4 HOH A 61 561 91 HOH HOH . D 4 HOH A 62 562 94 HOH HOH . D 4 HOH A 63 563 95 HOH HOH . D 4 HOH A 64 564 99 HOH HOH . D 4 HOH A 65 565 101 HOH HOH . D 4 HOH A 66 566 102 HOH HOH . D 4 HOH A 67 567 103 HOH HOH . D 4 HOH A 68 568 104 HOH HOH . D 4 HOH A 69 569 105 HOH HOH . D 4 HOH A 70 570 107 HOH HOH . D 4 HOH A 71 571 109 HOH HOH . D 4 HOH A 72 572 110 HOH HOH . D 4 HOH A 73 573 111 HOH HOH . D 4 HOH A 74 574 112 HOH HOH . D 4 HOH A 75 575 114 HOH HOH . D 4 HOH A 76 576 115 HOH HOH . D 4 HOH A 77 577 118 HOH HOH . D 4 HOH A 78 578 123 HOH HOH . D 4 HOH A 79 579 124 HOH HOH . D 4 HOH A 80 580 125 HOH HOH . D 4 HOH A 81 581 128 HOH HOH . D 4 HOH A 82 582 130 HOH HOH . D 4 HOH A 83 583 131 HOH HOH . D 4 HOH A 84 584 133 HOH HOH . D 4 HOH A 85 585 134 HOH HOH . D 4 HOH A 86 586 135 HOH HOH . D 4 HOH A 87 587 136 HOH HOH . D 4 HOH A 88 588 137 HOH HOH . D 4 HOH A 89 589 138 HOH HOH . D 4 HOH A 90 590 140 HOH HOH . D 4 HOH A 91 591 142 HOH HOH . D 4 HOH A 92 592 143 HOH HOH . D 4 HOH A 93 593 144 HOH HOH . D 4 HOH A 94 594 145 HOH HOH . D 4 HOH A 95 595 146 HOH HOH . D 4 HOH A 96 596 147 HOH HOH . D 4 HOH A 97 597 148 HOH HOH . D 4 HOH A 98 598 150 HOH HOH . D 4 HOH A 99 599 152 HOH HOH . D 4 HOH A 100 600 153 HOH HOH . D 4 HOH A 101 601 158 HOH HOH . D 4 HOH A 102 602 162 HOH HOH . D 4 HOH A 103 603 163 HOH HOH . D 4 HOH A 104 604 164 HOH HOH . D 4 HOH A 105 605 165 HOH HOH . D 4 HOH A 106 606 168 HOH HOH . D 4 HOH A 107 607 169 HOH HOH . D 4 HOH A 108 608 170 HOH HOH . D 4 HOH A 109 609 171 HOH HOH . D 4 HOH A 110 610 174 HOH HOH . D 4 HOH A 111 611 177 HOH HOH . D 4 HOH A 112 612 179 HOH HOH . D 4 HOH A 113 613 182 HOH HOH . D 4 HOH A 114 614 183 HOH HOH . D 4 HOH A 115 615 185 HOH HOH . D 4 HOH A 116 616 186 HOH HOH . D 4 HOH A 117 617 187 HOH HOH . D 4 HOH A 118 618 195 HOH HOH . D 4 HOH A 119 619 200 HOH HOH . D 4 HOH A 120 620 207 HOH HOH . D 4 HOH A 121 621 212 HOH HOH . D 4 HOH A 122 622 213 HOH HOH . D 4 HOH A 123 623 214 HOH HOH . D 4 HOH A 124 624 215 HOH HOH . D 4 HOH A 125 625 218 HOH HOH . D 4 HOH A 126 626 219 HOH HOH . D 4 HOH A 127 627 222 HOH HOH . D 4 HOH A 128 628 223 HOH HOH . D 4 HOH A 129 629 224 HOH HOH . D 4 HOH A 130 630 227 HOH HOH . D 4 HOH A 131 631 229 HOH HOH . D 4 HOH A 132 632 230 HOH HOH . D 4 HOH A 133 633 235 HOH HOH . D 4 HOH A 134 634 238 HOH HOH . D 4 HOH A 135 635 248 HOH HOH . D 4 HOH A 136 636 250 HOH HOH . D 4 HOH A 137 637 255 HOH HOH . D 4 HOH A 138 638 263 HOH HOH . D 4 HOH A 139 639 265 HOH HOH . D 4 HOH A 140 640 269 HOH HOH . D 4 HOH A 141 641 270 HOH HOH . D 4 HOH A 142 642 273 HOH HOH . D 4 HOH A 143 643 279 HOH HOH . D 4 HOH A 144 644 280 HOH HOH . D 4 HOH A 145 645 284 HOH HOH . D 4 HOH A 146 646 297 HOH HOH . D 4 HOH A 147 647 298 HOH HOH . D 4 HOH A 148 648 300 HOH HOH . D 4 HOH A 149 649 302 HOH HOH . D 4 HOH A 150 650 308 HOH HOH . D 4 HOH A 151 651 312 HOH HOH . D 4 HOH A 152 652 318 HOH HOH . D 4 HOH A 153 653 323 HOH HOH . D 4 HOH A 154 654 325 HOH HOH . D 4 HOH A 155 655 327 HOH HOH . D 4 HOH A 156 656 346 HOH HOH . D 4 HOH A 157 657 352 HOH HOH . D 4 HOH A 158 658 364 HOH HOH . D 4 HOH A 159 659 371 HOH HOH . D 4 HOH A 160 660 378 HOH HOH . D 4 HOH A 161 661 394 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 0YO . . . B 2 36.782 -15.119 28.333 1 24.44 ? C1 0YO 401 A 1 HETATM 2 C C2 0YO . . . B 2 37.111 -13.037 29.241 1 22.48 ? C2 0YO 401 A 1 HETATM 3 C C3 0YO . . . B 2 37.58 -12.503 27.973 1 20.64 ? C3 0YO 401 A 1 HETATM 4 C C7 0YO . . . B 2 36.472 -17.48 27.51 1 33.3 ? C7 0YO 401 A 1 HETATM 5 C C8 0YO . . . B 2 35.935 -18.763 27.728 1 36.39 ? C8 0YO 401 A 1 HETATM 6 C C9 0YO . . . B 2 35.193 -19 29.083 1 37.1 ? C9 0YO 401 A 1 HETATM 7 C C10 0YO . . . B 2 34.645 -20.22 29.334 1 39.59 ? C10 0YO 401 A 1 HETATM 8 C C11 0YO . . . B 2 34.749 -21.367 28.346 1 41.12 ? C11 0YO 401 A 1 HETATM 9 C C12 0YO . . . B 2 35.486 -21.151 27.059 1 41.04 ? C12 0YO 401 A 1 HETATM 10 C C13 0YO . . . B 2 36.081 -19.799 26.753 1 39.94 ? C13 0YO 401 A 1 HETATM 11 C C14 0YO . . . B 2 38.1 -13.073 25.425 1 21.49 ? C14 0YO 401 A 1 HETATM 12 C C15 0YO . . . B 2 38.561 -11.89 24.985 1 22.4 ? C15 0YO 401 A 1 HETATM 13 C C16 0YO . . . B 2 38.516 -13.463 23.458 1 21.56 ? C16 0YO 401 A 1 HETATM 14 C C19 0YO . . . B 2 39.293 -13.22 21.036 1 20.4 ? C19 0YO 401 A 1 HETATM 15 C C20 0YO . . . B 2 38.699 -14.172 22.129 1 22 ? C20 0YO 401 A 1 HETATM 16 C C21 0YO . . . B 2 37.62 -10.341 28.858 1 20.13 ? C21 0YO 401 A 1 HETATM 17 C C17 0YO . . . B 2 38.838 -12.134 23.681 1 21.48 ? C17 0YO 401 A 1 HETATM 18 C C18 0YO . . . B 2 39.322 -11.32 22.669 1 20.28 ? C18 0YO 401 A 1 HETATM 19 O O1 0YO . . . B 2 39.579 -10.126 22.85 1 23.68 ? O1 0YO 401 A 1 HETATM 20 N N5 0YO . . . B 2 39.49 -11.873 21.492 1 19.17 ? N5 0YO 401 A 1 HETATM 21 N N4 0YO . . . B 2 38.044 -14.079 24.532 1 19.06 ? N4 0YO 401 A 1 HETATM 22 C C4 0YO . . . B 2 37.624 -13.418 26.84 1 21.96 ? C4 0YO 401 A 1 HETATM 23 N N2 0YO . . . B 2 37.199 -14.782 27.045 1 20.53 ? N2 0YO 401 A 1 HETATM 24 N N1 0YO . . . B 2 36.732 -14.228 29.458 1 21.34 ? N1 0YO 401 A 1 HETATM 25 C C5 0YO . . . B 2 36.355 -16.461 28.531 1 29.42 ? C5 0YO 401 A 1 HETATM 26 N N3 0YO . . . B 2 35.139 -17.968 30.035 1 35.57 ? N3 0YO 401 A 1 HETATM 27 C C6 0YO . . . B 2 35.696 -16.752 29.784 1 31.5 ? C6 0YO 401 A 1 HETATM 28 O O2 0YO . . . B 2 37.954 -11.228 27.938 1 20.72 ? O2 0YO 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 28 #