data_4HGS # _model_server_result.job_id pGr1wIc9I_ifw81Hg0yrAA _model_server_result.datetime_utc '2024-11-22 05:23:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hgs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4HGS # _exptl.entry_id 4HGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.364 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[(3,4-difluorophenoxy)methyl]-5-methoxypyridin-4-yl}-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HGS _cell.length_a 57 _cell.length_b 57 _cell.length_c 223.59 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H17 F2 N3 O3' _chem_comp.formula_weight 385.364 _chem_comp.id 15G _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[(3,4-difluorophenoxy)methyl]-5-methoxypyridin-4-yl}-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C1 15G sing 1 n n C2 C1 15G doub 2 n y C2 C3 15G sing 3 n y C1 C6 15G sing 4 n y C3 C4 15G doub 5 n y C6 F2 15G sing 6 n n C6 C5 15G doub 7 n y C4 C5 15G sing 8 n y C4 O3 15G sing 9 n n C20 O3 15G sing 10 n n C20 C19 15G sing 11 n n N1 C19 15G doub 12 n y N1 C18 15G sing 13 n y C19 C16 15G sing 14 n y C18 C17 15G doub 15 n y C16 C15 15G doub 16 n y C17 C15 15G sing 17 n y C17 O2 15G sing 18 n n C15 C14 15G sing 19 n n C7 O2 15G sing 20 n n C14 N3 15G sing 21 n y C14 C8 15G doub 22 n y N3 C13 15G sing 23 n y C8 C9 15G sing 24 n y C13 C9 15G doub 25 n y C13 C12 15G sing 26 n n C9 C10 15G sing 27 n n C12 C11 15G sing 28 n n C10 O1 15G doub 29 n n C10 N2 15G sing 30 n n C11 N2 15G sing 31 n n C2 H1 15G sing 32 n n C3 H2 15G sing 33 n n C7 H3 15G sing 34 n n C7 H4 15G sing 35 n n C7 H5 15G sing 36 n n C8 H6 15G sing 37 n n C11 H7 15G sing 38 n n C11 H8 15G sing 39 n n C12 H9 15G sing 40 n n C12 H10 15G sing 41 n n C16 H11 15G sing 42 n n C20 H12 15G sing 43 n n C20 H13 15G sing 44 n n N2 H14 15G sing 45 n n N3 H15 15G sing 46 n n C18 H16 15G sing 47 n n C5 H17 15G sing 48 n n # _atom_sites.entry_id 4HGS _atom_sites.fract_transf_matrix[1][1] 0.017544 _atom_sites.fract_transf_matrix[1][2] 0.010129 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004472 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 15G A 1 401 1 15G INH . C 3 HOH A 1 501 2 HOH HOH . C 3 HOH A 2 502 5 HOH HOH . C 3 HOH A 3 503 6 HOH HOH . C 3 HOH A 4 504 7 HOH HOH . C 3 HOH A 5 505 9 HOH HOH . C 3 HOH A 6 506 11 HOH HOH . C 3 HOH A 7 507 12 HOH HOH . C 3 HOH A 8 508 13 HOH HOH . C 3 HOH A 9 509 14 HOH HOH . C 3 HOH A 10 510 15 HOH HOH . C 3 HOH A 11 511 17 HOH HOH . C 3 HOH A 12 512 18 HOH HOH . C 3 HOH A 13 513 19 HOH HOH . C 3 HOH A 14 514 21 HOH HOH . C 3 HOH A 15 515 23 HOH HOH . C 3 HOH A 16 516 24 HOH HOH . C 3 HOH A 17 517 25 HOH HOH . C 3 HOH A 18 518 27 HOH HOH . C 3 HOH A 19 519 28 HOH HOH . C 3 HOH A 20 520 30 HOH HOH . C 3 HOH A 21 521 34 HOH HOH . C 3 HOH A 22 522 35 HOH HOH . C 3 HOH A 23 523 36 HOH HOH . C 3 HOH A 24 524 38 HOH HOH . C 3 HOH A 25 525 39 HOH HOH . C 3 HOH A 26 526 40 HOH HOH . C 3 HOH A 27 527 41 HOH HOH . C 3 HOH A 28 528 44 HOH HOH . C 3 HOH A 29 529 45 HOH HOH . C 3 HOH A 30 530 46 HOH HOH . C 3 HOH A 31 531 49 HOH HOH . C 3 HOH A 32 532 50 HOH HOH . C 3 HOH A 33 533 51 HOH HOH . C 3 HOH A 34 534 52 HOH HOH . C 3 HOH A 35 535 53 HOH HOH . C 3 HOH A 36 536 54 HOH HOH . C 3 HOH A 37 537 55 HOH HOH . C 3 HOH A 38 538 57 HOH HOH . C 3 HOH A 39 539 58 HOH HOH . C 3 HOH A 40 540 59 HOH HOH . C 3 HOH A 41 541 60 HOH HOH . C 3 HOH A 42 542 63 HOH HOH . C 3 HOH A 43 543 64 HOH HOH . C 3 HOH A 44 544 65 HOH HOH . C 3 HOH A 45 545 66 HOH HOH . C 3 HOH A 46 546 69 HOH HOH . C 3 HOH A 47 547 76 HOH HOH . C 3 HOH A 48 548 78 HOH HOH . C 3 HOH A 49 549 82 HOH HOH . C 3 HOH A 50 550 83 HOH HOH . C 3 HOH A 51 551 84 HOH HOH . C 3 HOH A 52 552 88 HOH HOH . C 3 HOH A 53 553 90 HOH HOH . C 3 HOH A 54 554 91 HOH HOH . C 3 HOH A 55 555 94 HOH HOH . C 3 HOH A 56 556 96 HOH HOH . C 3 HOH A 57 557 98 HOH HOH . C 3 HOH A 58 558 100 HOH HOH . C 3 HOH A 59 559 101 HOH HOH . C 3 HOH A 60 560 103 HOH HOH . C 3 HOH A 61 561 106 HOH HOH . C 3 HOH A 62 562 107 HOH HOH . C 3 HOH A 63 563 108 HOH HOH . C 3 HOH A 64 564 109 HOH HOH . C 3 HOH A 65 565 110 HOH HOH . C 3 HOH A 66 566 111 HOH HOH . C 3 HOH A 67 567 114 HOH HOH . C 3 HOH A 68 568 116 HOH HOH . C 3 HOH A 69 569 117 HOH HOH . C 3 HOH A 70 570 119 HOH HOH . C 3 HOH A 71 571 120 HOH HOH . C 3 HOH A 72 572 122 HOH HOH . C 3 HOH A 73 573 123 HOH HOH . C 3 HOH A 74 574 124 HOH HOH . C 3 HOH A 75 575 125 HOH HOH . C 3 HOH A 76 576 126 HOH HOH . C 3 HOH A 77 577 127 HOH HOH . C 3 HOH A 78 578 128 HOH HOH . C 3 HOH A 79 579 138 HOH HOH . C 3 HOH A 80 580 140 HOH HOH . C 3 HOH A 81 581 141 HOH HOH . C 3 HOH A 82 582 143 HOH HOH . C 3 HOH A 83 583 145 HOH HOH . C 3 HOH A 84 584 147 HOH HOH . C 3 HOH A 85 585 149 HOH HOH . C 3 HOH A 86 586 150 HOH HOH . C 3 HOH A 87 587 151 HOH HOH . C 3 HOH A 88 588 152 HOH HOH . C 3 HOH A 89 589 153 HOH HOH . C 3 HOH A 90 590 154 HOH HOH . C 3 HOH A 91 591 156 HOH HOH . C 3 HOH A 92 592 162 HOH HOH . C 3 HOH A 93 593 163 HOH HOH . C 3 HOH A 94 594 167 HOH HOH . C 3 HOH A 95 595 171 HOH HOH . C 3 HOH A 96 596 176 HOH HOH . C 3 HOH A 97 597 179 HOH HOH . C 3 HOH A 98 598 180 HOH HOH . C 3 HOH A 99 599 181 HOH HOH . C 3 HOH A 100 600 183 HOH HOH . C 3 HOH A 101 601 184 HOH HOH . C 3 HOH A 102 602 188 HOH HOH . C 3 HOH A 103 603 189 HOH HOH . C 3 HOH A 104 604 190 HOH HOH . C 3 HOH A 105 605 192 HOH HOH . C 3 HOH A 106 606 194 HOH HOH . C 3 HOH A 107 607 198 HOH HOH . C 3 HOH A 108 608 199 HOH HOH . C 3 HOH A 109 609 201 HOH HOH . C 3 HOH A 110 610 203 HOH HOH . C 3 HOH A 111 611 205 HOH HOH . C 3 HOH A 112 612 207 HOH HOH . C 3 HOH A 113 613 213 HOH HOH . C 3 HOH A 114 614 218 HOH HOH . C 3 HOH A 115 615 219 HOH HOH . C 3 HOH A 116 616 221 HOH HOH . C 3 HOH A 117 617 223 HOH HOH . C 3 HOH A 118 618 227 HOH HOH . C 3 HOH A 119 619 230 HOH HOH . C 3 HOH A 120 620 231 HOH HOH . C 3 HOH A 121 621 236 HOH HOH . C 3 HOH A 122 622 239 HOH HOH . C 3 HOH A 123 623 244 HOH HOH . C 3 HOH A 124 624 252 HOH HOH . C 3 HOH A 125 625 253 HOH HOH . C 3 HOH A 126 626 254 HOH HOH . C 3 HOH A 127 627 257 HOH HOH . C 3 HOH A 128 628 260 HOH HOH . C 3 HOH A 129 629 266 HOH HOH . C 3 HOH A 130 630 269 HOH HOH . C 3 HOH A 131 631 283 HOH HOH . C 3 HOH A 132 632 291 HOH HOH . C 3 HOH A 133 633 292 HOH HOH . C 3 HOH A 134 634 315 HOH HOH . C 3 HOH A 135 635 322 HOH HOH . C 3 HOH A 136 636 324 HOH HOH . C 3 HOH A 137 637 325 HOH HOH . C 3 HOH A 138 638 333 HOH HOH . C 3 HOH A 139 639 338 HOH HOH . C 3 HOH A 140 640 345 HOH HOH . C 3 HOH A 141 641 358 HOH HOH . C 3 HOH A 142 642 367 HOH HOH . C 3 HOH A 143 643 386 HOH HOH . C 3 HOH A 144 644 387 HOH HOH . C 3 HOH A 145 645 398 HOH HOH . C 3 HOH A 146 646 404 HOH HOH . C 3 HOH A 147 647 407 HOH HOH . C 3 HOH A 148 648 418 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 15G . . . B 2 34.166 -21.021 28.116 1 48.57 ? C1 15G 401 A 1 HETATM 2 C C2 15G . . . B 2 35.45 -20.95 27.413 1 47.12 ? C2 15G 401 A 1 HETATM 3 C C3 15G . . . B 2 36.182 -19.697 27.576 1 45.58 ? C3 15G 401 A 1 HETATM 4 C C7 15G . . . B 2 37.641 -10.321 27.943 1 32.49 ? C7 15G 401 A 1 HETATM 5 C C8 15G . . . B 2 38.389 -12.231 24.749 1 33.23 ? C8 15G 401 A 1 HETATM 6 C C9 15G . . . B 2 38.587 -12.505 23.394 1 33.04 ? C9 15G 401 A 1 HETATM 7 C C10 15G . . . B 2 39.17 -11.69 22.448 1 31.39 ? C10 15G 401 A 1 HETATM 8 C C11 15G . . . B 2 38.37 -13.266 20.77 1 34.4 ? C11 15G 401 A 1 HETATM 9 C C12 15G . . . B 2 38.123 -14.395 21.766 1 31.47 ? C12 15G 401 A 1 HETATM 10 C C13 15G . . . B 2 38.079 -13.771 23.142 1 33.48 ? C13 15G 401 A 1 HETATM 11 C C14 15G . . . B 2 37.763 -13.385 25.207 1 33.17 ? C14 15G 401 A 1 HETATM 12 C C15 15G . . . B 2 37.34 -13.615 26.632 1 35.12 ? C15 15G 401 A 1 HETATM 13 C C16 15G . . . B 2 36.644 -14.868 26.953 1 35.56 ? C16 15G 401 A 1 HETATM 14 C C19 15G . . . B 2 36.297 -15.046 28.318 1 36.12 ? C19 15G 401 A 1 HETATM 15 C C20 15G . . . B 2 35.551 -16.266 28.643 1 38.33 ? C20 15G 401 A 1 HETATM 16 O O1 15G . . . B 2 39.684 -10.61 22.706 1 35.7 ? O1 15G 401 A 1 HETATM 17 N N2 15G . . . B 2 39.157 -12.127 21.249 1 30.97 ? N2 15G 401 A 1 HETATM 18 N N3 15G . . . B 2 37.572 -14.312 24.254 1 30.97 ? N3 15G 401 A 1 HETATM 19 C C17 15G . . . B 2 37.61 -12.688 27.726 1 34.85 ? C17 15G 401 A 1 HETATM 20 C C18 15G . . . B 2 37.201 -13.003 29.104 1 37.02 ? C18 15G 401 A 1 HETATM 21 N N1 15G . . . B 2 36.567 -14.162 29.362 1 34.5 ? N1 15G 401 A 1 HETATM 22 O O2 15G . . . B 2 38.275 -11.437 27.604 1 35.48 ? O2 15G 401 A 1 HETATM 23 O O3 15G . . . B 2 36.31 -17.417 28.554 1 43.05 ? O3 15G 401 A 1 HETATM 24 C C4 15G . . . B 2 35.6 -18.619 28.409 1 44.99 ? C4 15G 401 A 1 HETATM 25 C C5 15G . . . B 2 34.313 -18.731 29.1 1 46.35 ? C5 15G 401 A 1 HETATM 26 C C6 15G . . . B 2 33.615 -19.942 28.934 1 47.46 ? C6 15G 401 A 1 HETATM 27 F F1 15G . . . B 2 33.462 -22.138 28.006 1 49.69 ? F1 15G 401 A 1 HETATM 28 F F2 15G . . . B 2 32.469 -20.103 29.497 1 48.75 ? F2 15G 401 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 379 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #