data_4HHY # _model_server_result.job_id MM36KGKFjRjVHGUatTDcwQ _model_server_result.datetime_utc '2024-11-13 17:21:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hhy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4HHY # _exptl.entry_id 4HHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 579.621 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (9aR)-1-[(1-{2-fluoro-5-[(4-oxo-3,4-dihydrophthalazin-1-yl)methyl]benzoyl}piperidin-4-yl)carbonyl]-1,2,3,8,9,9a-hexahydro-7H-benzo[de][1,7]naphthyridin-7-one _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HHY _cell.length_a 103.797 _cell.length_b 107.549 _cell.length_c 143.107 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,J,N 1 1 D,K,O 2 1 A,E,F,G,L 3 1 B,H,I,M 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 189 A CYS 184 1_555 C SG CYS 189 C CYS 184 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 B SG CYS 189 B CYS 184 1_555 D SG CYS 189 D CYS 184 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C33 H30 F N5 O4' _chem_comp.formula_weight 579.621 _chem_comp.id 15R _chem_comp.mon_nstd_flag . _chem_comp.name (9aR)-1-[(1-{2-fluoro-5-[(4-oxo-3,4-dihydrophthalazin-1-yl)methyl]benzoyl}piperidin-4-yl)carbonyl]-1,2,3,8,9,9a-hexahydro-7H-benzo[de][1,7]naphthyridin-7-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAA CBA 15R doub 1 n n CBA NAY 15R sing 2 n n CBA CBG 15R sing 3 n n NAY CAV 15R sing 4 n n CAJ CBG 15R doub 5 n y CAJ CAH 15R sing 6 n y CBG CBJ 15R sing 7 n y CAV CBO 15R sing 8 n n CAH CAI 15R doub 9 n y CBJ CBO 15R sing 10 n n CBJ CBF 15R doub 11 n y CBO NBQ 15R sing 12 n n CAI CBF 15R sing 13 n y CBF CAP 15R sing 14 n n CAS NBQ 15R sing 15 n n CAS CAP 15R sing 16 n n NBQ CBC 15R sing 17 n n CBC OAC 15R doub 18 n n CBC CBN 15R sing 19 n n CAR CBN 15R sing 20 n n CAR CAU 15R sing 21 n n CBN CAQ 15R sing 22 n n OAB CBB 15R doub 23 n n CAU NBP 15R sing 24 n n CAQ CAT 15R sing 25 n n CBB NBP 15R sing 26 n n CBB CBH 15R sing 27 n n NBP CAT 15R sing 28 n n CAO CBH 15R doub 29 n y CAO CBD 15R sing 30 n y CAW CBD 15R sing 31 n n CAW CBI 15R sing 32 n n CBH CBE 15R sing 33 n y CAM CAF 15R doub 34 n y CAM CBL 15R sing 35 n y CAF CAG 15R sing 36 n y CBD CAK 15R doub 37 n y CBE FAE 15R sing 38 n n CBE CAL 15R doub 39 n y CAK CAL 15R sing 40 n y CBL CBI 15R sing 41 n n CBL CBM 15R doub 42 n y CAG CAN 15R doub 43 n y CBI NAX 15R doub 44 n n NAX NAZ 15R sing 45 n n CBM CAN 15R sing 46 n y CBM CBK 15R sing 47 n n NAZ CBK 15R sing 48 n n CBK OAD 15R doub 49 n n CAV H1 15R sing 50 n n CBO H2 15R sing 51 n n CAJ H3 15R sing 52 n n CAH H4 15R sing 53 n n CAI H5 15R sing 54 n n CAP H6 15R sing 55 n n CAP H7 15R sing 56 n n CAS H8 15R sing 57 n n CAS H9 15R sing 58 n n CBN H10 15R sing 59 n n CAR H11 15R sing 60 n n CAR H12 15R sing 61 n n CAU H13 15R sing 62 n n CAU H14 15R sing 63 n n CAQ H15 15R sing 64 n n CAQ H16 15R sing 65 n n CAT H17 15R sing 66 n n CAT H18 15R sing 67 n n CAO H19 15R sing 68 n n CAL H20 15R sing 69 n n CAK H21 15R sing 70 n n CAW H22 15R sing 71 n n CAW H23 15R sing 72 n n NAZ H24 15R sing 73 n n CAM H25 15R sing 74 n n CAF H26 15R sing 75 n n CAG H27 15R sing 76 n n CAN H28 15R sing 77 n n NAY H29 15R sing 78 n n CAV H30 15R sing 79 n n # _atom_sites.entry_id 4HHY _atom_sites.fract_transf_matrix[1][1] 0.009634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009298 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006988 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 15R A 1 401 401 15R 15R . F 3 SO4 A 1 402 402 SO4 SO4 . G 4 PEG A 1 403 403 PEG PEG . H 2 15R B 1 401 401 15R 15R . I 3 SO4 B 1 402 402 SO4 SO4 . J 2 15R C 1 401 401 15R 15R . K 2 15R D 1 401 401 15R 15R . L 5 HOH A 1 501 501 HOH HOH . L 5 HOH A 2 502 502 HOH HOH . L 5 HOH A 3 503 503 HOH HOH . L 5 HOH A 4 504 504 HOH HOH . L 5 HOH A 5 505 505 HOH HOH . L 5 HOH A 6 506 506 HOH HOH . L 5 HOH A 7 507 507 HOH HOH . L 5 HOH A 8 508 508 HOH HOH . L 5 HOH A 9 509 509 HOH HOH . L 5 HOH A 10 510 510 HOH HOH . L 5 HOH A 11 511 511 HOH HOH . L 5 HOH A 12 512 512 HOH HOH . L 5 HOH A 13 513 513 HOH HOH . L 5 HOH A 14 514 514 HOH HOH . L 5 HOH A 15 515 515 HOH HOH . L 5 HOH A 16 516 516 HOH HOH . L 5 HOH A 17 517 517 HOH HOH . L 5 HOH A 18 518 518 HOH HOH . L 5 HOH A 19 519 519 HOH HOH . L 5 HOH A 20 520 520 HOH HOH . L 5 HOH A 21 521 521 HOH HOH . L 5 HOH A 22 522 522 HOH HOH . L 5 HOH A 23 523 523 HOH HOH . L 5 HOH A 24 524 524 HOH HOH . L 5 HOH A 25 525 525 HOH HOH . L 5 HOH A 26 526 526 HOH HOH . L 5 HOH A 27 527 527 HOH HOH . L 5 HOH A 28 528 528 HOH HOH . L 5 HOH A 29 529 529 HOH HOH . L 5 HOH A 30 530 530 HOH HOH . L 5 HOH A 31 531 531 HOH HOH . L 5 HOH A 32 532 532 HOH HOH . M 5 HOH B 1 501 501 HOH HOH . M 5 HOH B 2 502 502 HOH HOH . M 5 HOH B 3 503 503 HOH HOH . M 5 HOH B 4 504 504 HOH HOH . M 5 HOH B 5 505 505 HOH HOH . M 5 HOH B 6 506 506 HOH HOH . M 5 HOH B 7 507 507 HOH HOH . M 5 HOH B 8 508 508 HOH HOH . M 5 HOH B 9 509 509 HOH HOH . M 5 HOH B 10 510 510 HOH HOH . M 5 HOH B 11 511 511 HOH HOH . M 5 HOH B 12 512 512 HOH HOH . M 5 HOH B 13 513 513 HOH HOH . M 5 HOH B 14 514 514 HOH HOH . M 5 HOH B 15 515 515 HOH HOH . M 5 HOH B 16 516 516 HOH HOH . M 5 HOH B 17 517 517 HOH HOH . M 5 HOH B 18 518 518 HOH HOH . M 5 HOH B 19 519 519 HOH HOH . M 5 HOH B 20 520 520 HOH HOH . M 5 HOH B 21 521 521 HOH HOH . M 5 HOH B 22 522 522 HOH HOH . M 5 HOH B 23 523 523 HOH HOH . M 5 HOH B 24 524 524 HOH HOH . M 5 HOH B 25 525 525 HOH HOH . M 5 HOH B 26 526 526 HOH HOH . M 5 HOH B 27 527 527 HOH HOH . N 5 HOH C 1 501 501 HOH HOH . N 5 HOH C 2 502 502 HOH HOH . N 5 HOH C 3 503 503 HOH HOH . N 5 HOH C 4 504 504 HOH HOH . N 5 HOH C 5 505 505 HOH HOH . N 5 HOH C 6 506 506 HOH HOH . N 5 HOH C 7 507 507 HOH HOH . N 5 HOH C 8 508 508 HOH HOH . N 5 HOH C 9 509 509 HOH HOH . N 5 HOH C 10 510 510 HOH HOH . N 5 HOH C 11 511 511 HOH HOH . N 5 HOH C 12 512 512 HOH HOH . N 5 HOH C 13 513 513 HOH HOH . N 5 HOH C 14 514 514 HOH HOH . N 5 HOH C 15 515 515 HOH HOH . N 5 HOH C 16 516 516 HOH HOH . N 5 HOH C 17 517 517 HOH HOH . N 5 HOH C 18 518 518 HOH HOH . O 5 HOH D 1 501 501 HOH HOH . O 5 HOH D 2 502 502 HOH HOH . O 5 HOH D 3 503 503 HOH HOH . O 5 HOH D 4 504 504 HOH HOH . O 5 HOH D 5 505 505 HOH HOH . O 5 HOH D 6 506 506 HOH HOH . O 5 HOH D 7 507 508 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA 15R . . . E 2 -42.834 7.778 -11.755 1 0 ? OAA 15R 401 A 1 HETATM 2 C CBA 15R . . . E 2 -42.098 7.359 -10.648 1 0 ? CBA 15R 401 A 1 HETATM 3 N NAY 15R . . . E 2 -41.54 6.044 -10.895 1 0.36 ? NAY 15R 401 A 1 HETATM 4 C CAV 15R . . . E 2 -40.978 5.391 -9.735 1 1 ? CAV 15R 401 A 1 HETATM 5 C CBO 15R . . . E 2 -39.74 6.221 -9.295 1 1.6 ? CBO 15R 401 A 1 HETATM 6 C CBJ 15R . . . E 2 -40.07 7.75 -9.349 1 0.82 ? CBJ 15R 401 A 1 HETATM 7 C CBG 15R . . . E 2 -40.985 8.263 -10.254 1 0.76 ? CBG 15R 401 A 1 HETATM 8 C CAJ 15R . . . E 2 -41.454 9.647 -10.004 1 0.31 ? CAJ 15R 401 A 1 HETATM 9 C CAH 15R . . . E 2 -40.452 10.572 -9.476 1 0.58 ? CAH 15R 401 A 1 HETATM 10 C CAI 15R . . . E 2 -39.299 10.077 -8.793 1 0.68 ? CAI 15R 401 A 1 HETATM 11 C CBF 15R . . . E 2 -39.055 8.631 -8.869 1 1.17 ? CBF 15R 401 A 1 HETATM 12 C CAP 15R . . . E 2 -38.07 8.106 -7.83 1 3.99 ? CAP 15R 401 A 1 HETATM 13 C CAS 15R . . . E 2 -37.726 6.66 -8.083 1 4.45 ? CAS 15R 401 A 1 HETATM 14 N NBQ 15R . . . E 2 -38.99 5.955 -8.041 1 3.09 ? NBQ 15R 401 A 1 HETATM 15 C CBC 15R . . . E 2 -39.258 5.332 -6.799 1 6.76 ? CBC 15R 401 A 1 HETATM 16 O OAC 15R . . . E 2 -38.293 5.452 -6.062 1 9.2 ? OAC 15R 401 A 1 HETATM 17 C CBN 15R . . . E 2 -40.384 4.523 -6.126 1 6.29 ? CBN 15R 401 A 1 HETATM 18 C CAR 15R . . . E 2 -41.739 5.146 -6.071 1 6.57 ? CAR 15R 401 A 1 HETATM 19 C CAU 15R . . . E 2 -42.665 4.417 -5.149 1 2.14 ? CAU 15R 401 A 1 HETATM 20 C CAQ 15R . . . E 2 -39.848 4.517 -4.713 1 7.69 ? CAQ 15R 401 A 1 HETATM 21 C CAT 15R . . . E 2 -40.75 3.821 -3.81 1 13.74 ? CAT 15R 401 A 1 HETATM 22 N NBP 15R . . . E 2 -41.942 3.318 -4.47 1 14.17 ? NBP 15R 401 A 1 HETATM 23 C CBB 15R . . . E 2 -42.402 2.01 -4.483 1 27.45 ? CBB 15R 401 A 1 HETATM 24 O OAB 15R . . . E 2 -43.399 1.839 -5.075 1 22.17 ? OAB 15R 401 A 1 HETATM 25 C CBH 15R . . . E 2 -41.828 0.778 -3.915 1 23.97 ? CBH 15R 401 A 1 HETATM 26 C CAO 15R . . . E 2 -42.615 -0.343 -4.088 1 20.68 ? CAO 15R 401 A 1 HETATM 27 C CBE 15R . . . E 2 -40.612 0.565 -3.268 1 27.12 ? CBE 15R 401 A 1 HETATM 28 F FAE 15R . . . E 2 -39.727 1.459 -3.009 1 36.49 ? FAE 15R 401 A 1 HETATM 29 C CAL 15R . . . E 2 -40.252 -0.71 -2.816 1 24.25 ? CAL 15R 401 A 1 HETATM 30 C CAK 15R . . . E 2 -41.063 -1.786 -3.009 1 21.22 ? CAK 15R 401 A 1 HETATM 31 C CBD 15R . . . E 2 -42.251 -1.593 -3.639 1 20.83 ? CBD 15R 401 A 1 HETATM 32 C CAW 15R . . . E 2 -43.14 -2.702 -3.881 1 18.5 ? CAW 15R 401 A 1 HETATM 33 C CBI 15R . . . E 2 -43.394 -3.443 -2.628 1 19.58 ? CBI 15R 401 A 1 HETATM 34 N NAX 15R . . . E 2 -43.316 -2.833 -1.47 1 19.26 ? NAX 15R 401 A 1 HETATM 35 N NAZ 15R . . . E 2 -43.546 -3.454 -0.311 1 13.54 ? NAZ 15R 401 A 1 HETATM 36 C CBK 15R . . . E 2 -43.873 -4.763 -0.294 1 22.38 ? CBK 15R 401 A 1 HETATM 37 O OAD 15R . . . E 2 -44.107 -5.402 0.91 1 37.64 ? OAD 15R 401 A 1 HETATM 38 C CBM 15R . . . E 2 -43.986 -5.544 -1.517 1 21.52 ? CBM 15R 401 A 1 HETATM 39 C CBL 15R . . . E 2 -43.752 -4.877 -2.711 1 19.6 ? CBL 15R 401 A 1 HETATM 40 C CAM 15R . . . E 2 -43.843 -5.575 -3.952 1 18.98 ? CAM 15R 401 A 1 HETATM 41 C CAF 15R . . . E 2 -44.19 -6.932 -3.944 1 20.23 ? CAF 15R 401 A 1 HETATM 42 C CAG 15R . . . E 2 -44.434 -7.618 -2.721 1 24.49 ? CAG 15R 401 A 1 HETATM 43 C CAN 15R . . . E 2 -44.335 -6.942 -1.513 1 22.91 ? CAN 15R 401 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #