data_4HHY
#
_model_server_result.job_id            821PnQ0601yHwHzlZDlupQ 
_model_server_result.datetime_utc      '2024-11-25 10:59:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hhy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":401}' 
#
_entry.id    4HHY 
#
_exptl.entry_id    4HHY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              579.621 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (9aR)-1-[(1-{2-fluoro-5-[(4-oxo-3,4-dihydrophthalazin-1-yl)methyl]benzoyl}piperidin-4-yl)carbonyl]-1,2,3,8,9,9a-hexahydro-7H-benzo[de][1,7]naphthyridin-7-one 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4HHY 
_cell.length_a            103.797 
_cell.length_b            107.549 
_cell.length_c            143.107 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HHY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
C,J,N 1 1 
D,K,O 2 1 
A,E,F,G,L 3 1 
B,H,I,M 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 189 A CYS 184 1_555 C SG CYS 189 C CYS 184 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf2 B SG CYS 189 B CYS 184 1_555 D SG CYS 189 D CYS 184 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
#
_chem_comp.formula           'C33 H30 F N5 O4' 
_chem_comp.formula_weight    579.621 
_chem_comp.id                15R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (9aR)-1-[(1-{2-fluoro-5-[(4-oxo-3,4-dihydrophthalazin-1-yl)methyl]benzoyl}piperidin-4-yl)carbonyl]-1,2,3,8,9,9a-hexahydro-7H-benzo[de][1,7]naphthyridin-7-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAA CBA 15R doub 1 n n 
CBA NAY 15R sing 2 n n 
CBA CBG 15R sing 3 n n 
NAY CAV 15R sing 4 n n 
CAJ CBG 15R doub 5 n y 
CAJ CAH 15R sing 6 n y 
CBG CBJ 15R sing 7 n y 
CAV CBO 15R sing 8 n n 
CAH CAI 15R doub 9 n y 
CBJ CBO 15R sing 10 n n 
CBJ CBF 15R doub 11 n y 
CBO NBQ 15R sing 12 n n 
CAI CBF 15R sing 13 n y 
CBF CAP 15R sing 14 n n 
CAS NBQ 15R sing 15 n n 
CAS CAP 15R sing 16 n n 
NBQ CBC 15R sing 17 n n 
CBC OAC 15R doub 18 n n 
CBC CBN 15R sing 19 n n 
CAR CBN 15R sing 20 n n 
CAR CAU 15R sing 21 n n 
CBN CAQ 15R sing 22 n n 
OAB CBB 15R doub 23 n n 
CAU NBP 15R sing 24 n n 
CAQ CAT 15R sing 25 n n 
CBB NBP 15R sing 26 n n 
CBB CBH 15R sing 27 n n 
NBP CAT 15R sing 28 n n 
CAO CBH 15R doub 29 n y 
CAO CBD 15R sing 30 n y 
CAW CBD 15R sing 31 n n 
CAW CBI 15R sing 32 n n 
CBH CBE 15R sing 33 n y 
CAM CAF 15R doub 34 n y 
CAM CBL 15R sing 35 n y 
CAF CAG 15R sing 36 n y 
CBD CAK 15R doub 37 n y 
CBE FAE 15R sing 38 n n 
CBE CAL 15R doub 39 n y 
CAK CAL 15R sing 40 n y 
CBL CBI 15R sing 41 n n 
CBL CBM 15R doub 42 n y 
CAG CAN 15R doub 43 n y 
CBI NAX 15R doub 44 n n 
NAX NAZ 15R sing 45 n n 
CBM CAN 15R sing 46 n y 
CBM CBK 15R sing 47 n n 
NAZ CBK 15R sing 48 n n 
CBK OAD 15R doub 49 n n 
CAV H1 15R sing 50 n n 
CBO H2 15R sing 51 n n 
CAJ H3 15R sing 52 n n 
CAH H4 15R sing 53 n n 
CAI H5 15R sing 54 n n 
CAP H6 15R sing 55 n n 
CAP H7 15R sing 56 n n 
CAS H8 15R sing 57 n n 
CAS H9 15R sing 58 n n 
CBN H10 15R sing 59 n n 
CAR H11 15R sing 60 n n 
CAR H12 15R sing 61 n n 
CAU H13 15R sing 62 n n 
CAU H14 15R sing 63 n n 
CAQ H15 15R sing 64 n n 
CAQ H16 15R sing 65 n n 
CAT H17 15R sing 66 n n 
CAT H18 15R sing 67 n n 
CAO H19 15R sing 68 n n 
CAL H20 15R sing 69 n n 
CAK H21 15R sing 70 n n 
CAW H22 15R sing 71 n n 
CAW H23 15R sing 72 n n 
NAZ H24 15R sing 73 n n 
CAM H25 15R sing 74 n n 
CAF H26 15R sing 75 n n 
CAG H27 15R sing 76 n n 
CAN H28 15R sing 77 n n 
NAY H29 15R sing 78 n n 
CAV H30 15R sing 79 n n 
#
_atom_sites.entry_id                     4HHY 
_atom_sites.fract_transf_matrix[1][1]    0.009634 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009298 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006988 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 15R A 1 401 401 15R 15R . 
F 3 SO4 A 1 402 402 SO4 SO4 . 
G 4 PEG A 1 403 403 PEG PEG . 
H 2 15R B 1 401 401 15R 15R . 
I 3 SO4 B 1 402 402 SO4 SO4 . 
J 2 15R C 1 401 401 15R 15R . 
K 2 15R D 1 401 401 15R 15R . 
L 5 HOH A 1 501 501 HOH HOH . 
L 5 HOH A 2 502 502 HOH HOH . 
L 5 HOH A 3 503 503 HOH HOH . 
L 5 HOH A 4 504 504 HOH HOH . 
L 5 HOH A 5 505 505 HOH HOH . 
L 5 HOH A 6 506 506 HOH HOH . 
L 5 HOH A 7 507 507 HOH HOH . 
L 5 HOH A 8 508 508 HOH HOH . 
L 5 HOH A 9 509 509 HOH HOH . 
L 5 HOH A 10 510 510 HOH HOH . 
L 5 HOH A 11 511 511 HOH HOH . 
L 5 HOH A 12 512 512 HOH HOH . 
L 5 HOH A 13 513 513 HOH HOH . 
L 5 HOH A 14 514 514 HOH HOH . 
L 5 HOH A 15 515 515 HOH HOH . 
L 5 HOH A 16 516 516 HOH HOH . 
L 5 HOH A 17 517 517 HOH HOH . 
L 5 HOH A 18 518 518 HOH HOH . 
L 5 HOH A 19 519 519 HOH HOH . 
L 5 HOH A 20 520 520 HOH HOH . 
L 5 HOH A 21 521 521 HOH HOH . 
L 5 HOH A 22 522 522 HOH HOH . 
L 5 HOH A 23 523 523 HOH HOH . 
L 5 HOH A 24 524 524 HOH HOH . 
L 5 HOH A 25 525 525 HOH HOH . 
L 5 HOH A 26 526 526 HOH HOH . 
L 5 HOH A 27 527 527 HOH HOH . 
L 5 HOH A 28 528 528 HOH HOH . 
L 5 HOH A 29 529 529 HOH HOH . 
L 5 HOH A 30 530 530 HOH HOH . 
L 5 HOH A 31 531 531 HOH HOH . 
L 5 HOH A 32 532 532 HOH HOH . 
M 5 HOH B 1 501 501 HOH HOH . 
M 5 HOH B 2 502 502 HOH HOH . 
M 5 HOH B 3 503 503 HOH HOH . 
M 5 HOH B 4 504 504 HOH HOH . 
M 5 HOH B 5 505 505 HOH HOH . 
M 5 HOH B 6 506 506 HOH HOH . 
M 5 HOH B 7 507 507 HOH HOH . 
M 5 HOH B 8 508 508 HOH HOH . 
M 5 HOH B 9 509 509 HOH HOH . 
M 5 HOH B 10 510 510 HOH HOH . 
M 5 HOH B 11 511 511 HOH HOH . 
M 5 HOH B 12 512 512 HOH HOH . 
M 5 HOH B 13 513 513 HOH HOH . 
M 5 HOH B 14 514 514 HOH HOH . 
M 5 HOH B 15 515 515 HOH HOH . 
M 5 HOH B 16 516 516 HOH HOH . 
M 5 HOH B 17 517 517 HOH HOH . 
M 5 HOH B 18 518 518 HOH HOH . 
M 5 HOH B 19 519 519 HOH HOH . 
M 5 HOH B 20 520 520 HOH HOH . 
M 5 HOH B 21 521 521 HOH HOH . 
M 5 HOH B 22 522 522 HOH HOH . 
M 5 HOH B 23 523 523 HOH HOH . 
M 5 HOH B 24 524 524 HOH HOH . 
M 5 HOH B 25 525 525 HOH HOH . 
M 5 HOH B 26 526 526 HOH HOH . 
M 5 HOH B 27 527 527 HOH HOH . 
N 5 HOH C 1 501 501 HOH HOH . 
N 5 HOH C 2 502 502 HOH HOH . 
N 5 HOH C 3 503 503 HOH HOH . 
N 5 HOH C 4 504 504 HOH HOH . 
N 5 HOH C 5 505 505 HOH HOH . 
N 5 HOH C 6 506 506 HOH HOH . 
N 5 HOH C 7 507 507 HOH HOH . 
N 5 HOH C 8 508 508 HOH HOH . 
N 5 HOH C 9 509 509 HOH HOH . 
N 5 HOH C 10 510 510 HOH HOH . 
N 5 HOH C 11 511 511 HOH HOH . 
N 5 HOH C 12 512 512 HOH HOH . 
N 5 HOH C 13 513 513 HOH HOH . 
N 5 HOH C 14 514 514 HOH HOH . 
N 5 HOH C 15 515 515 HOH HOH . 
N 5 HOH C 16 516 516 HOH HOH . 
N 5 HOH C 17 517 517 HOH HOH . 
N 5 HOH C 18 518 518 HOH HOH . 
O 5 HOH D 1 501 501 HOH HOH . 
O 5 HOH D 2 502 502 HOH HOH . 
O 5 HOH D 3 503 503 HOH HOH . 
O 5 HOH D 4 504 504 HOH HOH . 
O 5 HOH D 5 505 505 HOH HOH . 
O 5 HOH D 6 506 506 HOH HOH . 
O 5 HOH D 7 507 508 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAA 15R . . . J 2 -35.324 -53.671 -7.58 1 3.72 ? OAA 15R 401 C 1 
HETATM 2 C CBA 15R . . . J 2 -36.104 -53.611 -6.399 1 5.66 ? CBA 15R 401 C 1 
HETATM 3 N NAY 15R . . . J 2 -36.411 -52.241 -5.988 1 3.15 ? NAY 15R 401 C 1 
HETATM 4 C CAV 15R . . . J 2 -37.12 -52.145 -4.715 1 10.58 ? CAV 15R 401 C 1 
HETATM 5 C CBO 15R . . . J 2 -38.441 -53.018 -4.664 1 10.12 ? CBO 15R 401 C 1 
HETATM 6 C CBJ 15R . . . J 2 -38.233 -54.353 -5.443 1 9.2 ? CBJ 15R 401 C 1 
HETATM 7 C CBG 15R . . . J 2 -37.346 -54.417 -6.499 1 8.76 ? CBG 15R 401 C 1 
HETATM 8 C CAJ 15R . . . J 2 -36.892 -55.789 -6.748 1 6.94 ? CAJ 15R 401 C 1 
HETATM 9 C CAH 15R . . . J 2 -37.927 -56.817 -6.766 1 9.26 ? CAH 15R 401 C 1 
HETATM 10 C CAI 15R . . . J 2 -39.085 -56.628 -5.976 1 8.01 ? CAI 15R 401 C 1 
HETATM 11 C CBF 15R . . . J 2 -39.324 -55.267 -5.505 1 6.8 ? CBF 15R 401 C 1 
HETATM 12 C CAP 15R . . . J 2 -40.42 -55.251 -4.462 1 13.22 ? CAP 15R 401 C 1 
HETATM 13 C CAS 15R . . . J 2 -40.517 -53.97 -3.699 1 16.25 ? CAS 15R 401 C 1 
HETATM 14 N NBQ 15R . . . J 2 -39.227 -53.291 -3.414 1 15.29 ? NBQ 15R 401 C 1 
HETATM 15 C CBC 15R . . . J 2 -38.932 -53.014 -2.053 1 20.91 ? CBC 15R 401 C 1 
HETATM 16 O OAC 15R . . . J 2 -39.777 -53.363 -1.261 1 22.85 ? OAC 15R 401 C 1 
HETATM 17 C CBN 15R . . . J 2 -37.742 -52.335 -1.385 1 20.87 ? CBN 15R 401 C 1 
HETATM 18 C CAR 15R . . . J 2 -36.593 -53.223 -1.111 1 19.71 ? CAR 15R 401 C 1 
HETATM 19 C CAU 15R . . . J 2 -35.534 -52.522 -0.332 1 21.22 ? CAU 15R 401 C 1 
HETATM 20 C CAQ 15R . . . J 2 -38.247 -51.783 -0.095 1 31.93 ? CAQ 15R 401 C 1 
HETATM 21 C CAT 15R . . . J 2 -37.247 -50.785 0.283 1 33.85 ? CAT 15R 401 C 1 
HETATM 22 N NBP 15R . . . J 2 -35.963 -51.414 0.566 1 46.49 ? NBP 15R 401 C 1 
HETATM 23 C CBB 15R . . . J 2 -35.157 -51 1.595 1 42.93 ? CBB 15R 401 C 1 
HETATM 24 O OAB 15R . . . J 2 -34.148 -51.573 1.705 1 27.52 ? OAB 15R 401 C 1 
HETATM 25 C CBH 15R . . . J 2 -35.487 -49.909 2.509 1 34.42 ? CBH 15R 401 C 1 
HETATM 26 C CAO 15R . . . J 2 -34.595 -48.855 2.627 1 31.92 ? CAO 15R 401 C 1 
HETATM 27 C CBE 15R . . . J 2 -36.652 -49.845 3.255 1 42.72 ? CBE 15R 401 C 1 
HETATM 28 F FAE 15R . . . J 2 -37.552 -50.77 3.205 1 45.83 ? FAE 15R 401 C 1 
HETATM 29 C CAL 15R . . . J 2 -36.894 -48.742 4.087 1 33.9 ? CAL 15R 401 C 1 
HETATM 30 C CAK 15R . . . J 2 -35.992 -47.713 4.199 1 27.18 ? CAK 15R 401 C 1 
HETATM 31 C CBD 15R . . . J 2 -34.829 -47.767 3.467 1 36.85 ? CBD 15R 401 C 1 
HETATM 32 C CAW 15R . . . J 2 -33.839 -46.695 3.533 1 25.36 ? CAW 15R 401 C 1 
HETATM 33 C CBI 15R . . . J 2 -33.234 -46.604 4.888 1 29.19 ? CBI 15R 401 C 1 
HETATM 34 N NAX 15R . . . J 2 -33.422 -47.596 5.734 1 26.73 ? NAX 15R 401 C 1 
HETATM 35 N NAZ 15R . . . J 2 -32.932 -47.603 6.979 1 29.82 ? NAZ 15R 401 C 1 
HETATM 36 C CBK 15R . . . J 2 -32.204 -46.554 7.434 1 38.55 ? CBK 15R 401 C 1 
HETATM 37 O OAD 15R . . . J 2 -31.702 -46.569 8.722 1 51.7 ? OAD 15R 401 C 1 
HETATM 38 C CBM 15R . . . J 2 -31.923 -45.387 6.598 1 34.81 ? CBM 15R 401 C 1 
HETATM 39 C CBL 15R . . . J 2 -32.44 -45.401 5.298 1 33.02 ? CBL 15R 401 C 1 
HETATM 40 C CAM 15R . . . J 2 -32.194 -44.271 4.439 1 35.65 ? CAM 15R 401 C 1 
HETATM 41 C CAF 15R . . . J 2 -31.434 -43.179 4.901 1 26.01 ? CAF 15R 401 C 1 
HETATM 42 C CAG 15R . . . J 2 -30.907 -43.178 6.227 1 35.12 ? CAG 15R 401 C 1 
HETATM 43 C CAN 15R . . . J 2 -31.145 -44.259 7.071 1 32.82 ? CAN 15R 401 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           43 
#