data_4HIB # _model_server_result.job_id DVmemyo5D-mUmrwEZeOTmQ _model_server_result.datetime_utc '2024-11-23 11:18:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4HIB # _exptl.entry_id 4HIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.08 _cell.angle_gamma 90 _cell.entry_id 4HIB _cell.length_a 69.78 _cell.length_b 61.64 _cell.length_c 71.37 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 166 n n C1 C2 GOL sing 167 n n C1 H11 GOL sing 168 n n C1 H12 GOL sing 169 n n O1 HO1 GOL sing 170 n n C2 O2 GOL sing 171 n n C2 C3 GOL sing 172 n n C2 H2 GOL sing 173 n n O2 HO2 GOL sing 174 n n C3 O3 GOL sing 175 n n C3 H31 GOL sing 176 n n C3 H32 GOL sing 177 n n O3 HO3 GOL sing 178 n n # _atom_sites.entry_id 4HIB _atom_sites.fract_transf_matrix[1][1] 0.014331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005813 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016223 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01512 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 301 1 GOL GOL . D 3 CL A 1 302 1 CL CL . E 3 CL A 1 303 1 CL CL . F 4 16B A 1 304 1 16B 16B . G 4 16B B 1 301 1 16B 16B . H 5 HOH A 1 401 3 HOH HOH . H 5 HOH A 2 402 4 HOH HOH . H 5 HOH A 3 403 9 HOH HOH . H 5 HOH A 4 404 15 HOH HOH . H 5 HOH A 5 405 16 HOH HOH . H 5 HOH A 6 406 18 HOH HOH . H 5 HOH A 7 407 20 HOH HOH . H 5 HOH A 8 408 23 HOH HOH . H 5 HOH A 9 409 26 HOH HOH . H 5 HOH A 10 410 28 HOH HOH . H 5 HOH A 11 411 29 HOH HOH . H 5 HOH A 12 412 31 HOH HOH . H 5 HOH A 13 413 34 HOH HOH . H 5 HOH A 14 414 37 HOH HOH . H 5 HOH A 15 415 38 HOH HOH . H 5 HOH A 16 416 39 HOH HOH . H 5 HOH A 17 417 42 HOH HOH . H 5 HOH A 18 418 43 HOH HOH . H 5 HOH A 19 419 44 HOH HOH . H 5 HOH A 20 420 45 HOH HOH . H 5 HOH A 21 421 46 HOH HOH . H 5 HOH A 22 422 47 HOH HOH . H 5 HOH A 23 423 48 HOH HOH . H 5 HOH A 24 424 50 HOH HOH . H 5 HOH A 25 425 51 HOH HOH . H 5 HOH A 26 426 54 HOH HOH . H 5 HOH A 27 427 57 HOH HOH . H 5 HOH A 28 428 60 HOH HOH . H 5 HOH A 29 429 63 HOH HOH . H 5 HOH A 30 430 65 HOH HOH . H 5 HOH A 31 431 67 HOH HOH . H 5 HOH A 32 432 73 HOH HOH . H 5 HOH A 33 433 75 HOH HOH . H 5 HOH A 34 434 76 HOH HOH . H 5 HOH A 35 435 78 HOH HOH . H 5 HOH A 36 436 79 HOH HOH . H 5 HOH A 37 437 81 HOH HOH . H 5 HOH A 38 438 83 HOH HOH . H 5 HOH A 39 439 91 HOH HOH . H 5 HOH A 40 440 92 HOH HOH . H 5 HOH A 41 441 96 HOH HOH . H 5 HOH A 42 442 97 HOH HOH . H 5 HOH A 43 443 98 HOH HOH . H 5 HOH A 44 444 99 HOH HOH . H 5 HOH A 45 445 103 HOH HOH . H 5 HOH A 46 446 104 HOH HOH . H 5 HOH A 47 447 114 HOH HOH . H 5 HOH A 48 448 115 HOH HOH . H 5 HOH A 49 449 117 HOH HOH . H 5 HOH A 50 450 123 HOH HOH . H 5 HOH A 51 451 126 HOH HOH . H 5 HOH A 52 452 138 HOH HOH . H 5 HOH A 53 453 139 HOH HOH . H 5 HOH A 54 454 140 HOH HOH . H 5 HOH A 55 455 144 HOH HOH . H 5 HOH A 56 456 145 HOH HOH . H 5 HOH A 57 457 146 HOH HOH . H 5 HOH A 58 458 158 HOH HOH . H 5 HOH A 59 459 161 HOH HOH . H 5 HOH A 60 460 173 HOH HOH . H 5 HOH A 61 461 174 HOH HOH . H 5 HOH A 62 462 181 HOH HOH . H 5 HOH A 63 463 182 HOH HOH . H 5 HOH A 64 464 185 HOH HOH . H 5 HOH A 65 465 186 HOH HOH . H 5 HOH A 66 466 187 HOH HOH . I 5 HOH B 1 401 2 HOH HOH . I 5 HOH B 2 402 5 HOH HOH . I 5 HOH B 3 403 7 HOH HOH . I 5 HOH B 4 404 8 HOH HOH . I 5 HOH B 5 405 10 HOH HOH . I 5 HOH B 6 406 11 HOH HOH . I 5 HOH B 7 407 13 HOH HOH . I 5 HOH B 8 408 14 HOH HOH . I 5 HOH B 9 409 17 HOH HOH . I 5 HOH B 10 410 19 HOH HOH . I 5 HOH B 11 411 21 HOH HOH . I 5 HOH B 12 412 22 HOH HOH . I 5 HOH B 13 413 24 HOH HOH . I 5 HOH B 14 414 25 HOH HOH . I 5 HOH B 15 415 27 HOH HOH . I 5 HOH B 16 416 32 HOH HOH . I 5 HOH B 17 417 33 HOH HOH . I 5 HOH B 18 418 35 HOH HOH . I 5 HOH B 19 419 36 HOH HOH . I 5 HOH B 20 420 41 HOH HOH . I 5 HOH B 21 421 52 HOH HOH . I 5 HOH B 22 422 55 HOH HOH . I 5 HOH B 23 423 58 HOH HOH . I 5 HOH B 24 424 59 HOH HOH . I 5 HOH B 25 425 61 HOH HOH . I 5 HOH B 26 426 62 HOH HOH . I 5 HOH B 27 427 64 HOH HOH . I 5 HOH B 28 428 68 HOH HOH . I 5 HOH B 29 429 69 HOH HOH . I 5 HOH B 30 430 70 HOH HOH . I 5 HOH B 31 431 72 HOH HOH . I 5 HOH B 32 432 77 HOH HOH . I 5 HOH B 33 433 80 HOH HOH . I 5 HOH B 34 434 82 HOH HOH . I 5 HOH B 35 435 85 HOH HOH . I 5 HOH B 36 436 89 HOH HOH . I 5 HOH B 37 437 93 HOH HOH . I 5 HOH B 38 438 113 HOH HOH . I 5 HOH B 39 439 124 HOH HOH . I 5 HOH B 40 440 150 HOH HOH . I 5 HOH B 41 441 151 HOH HOH . I 5 HOH B 42 442 153 HOH HOH . I 5 HOH B 43 443 159 HOH HOH . I 5 HOH B 44 444 163 HOH HOH . I 5 HOH B 45 445 176 HOH HOH . I 5 HOH B 46 446 179 HOH HOH . I 5 HOH B 47 447 188 HOH HOH . I 5 HOH B 48 448 189 HOH HOH . I 5 HOH B 49 449 190 HOH HOH . I 5 HOH B 50 450 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 10.371 13.683 46.102 1 40.09 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . C 2 9.697 12.876 47.029 1 28.73 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . C 2 9.397 13.758 44.931 1 38.92 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . C 2 8.478 12.945 45.606 1 37.73 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . C 2 8.982 15.224 44.947 1 33.21 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . C 2 10.143 16.073 45.076 1 51.23 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 617 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #