data_4HIU # _model_server_result.job_id Ibm1VF2RrnDzlRhFaJ3Keg _model_server_result.datetime_utc '2024-12-22 07:13:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hiu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4HIU # _exptl.entry_id 4HIU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.221 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HIU _cell.length_a 139.732 _cell.length_b 139.732 _cell.length_c 139.732 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 4 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H14 N5 O8 P' _chem_comp.formula_weight 363.221 _chem_comp.id 5GP _chem_comp.mon_nstd_flag . _chem_comp.name "GUANOSINE-5'-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P 5GP doub 1 n n P O2P 5GP sing 2 n n P O3P 5GP sing 3 n n P O5' 5GP sing 4 n n O2P HOP2 5GP sing 5 n n O3P HOP3 5GP sing 6 n n O5' C5' 5GP sing 7 n n C5' C4' 5GP sing 8 n n C5' "H5'1" 5GP sing 9 n n C5' "H5'2" 5GP sing 10 n n C4' O4' 5GP sing 11 n n C4' C3' 5GP sing 12 n n C4' H4' 5GP sing 13 n n O4' C1' 5GP sing 14 n n C3' O3' 5GP sing 15 n n C3' C2' 5GP sing 16 n n C3' H3' 5GP sing 17 n n O3' HO3' 5GP sing 18 n n C2' O2' 5GP sing 19 n n C2' C1' 5GP sing 20 n n C2' H2' 5GP sing 21 n n O2' HO2' 5GP sing 22 n n C1' N9 5GP sing 23 n n C1' H1' 5GP sing 24 n n N9 C8 5GP sing 25 n y N9 C4 5GP sing 26 n y C8 N7 5GP doub 27 n y C8 H8 5GP sing 28 n n N7 C5 5GP sing 29 n y C5 C6 5GP sing 30 n n C5 C4 5GP doub 31 n y C6 O6 5GP doub 32 n n C6 N1 5GP sing 33 n n N1 C2 5GP sing 34 n n N1 HN1 5GP sing 35 n n C2 N2 5GP sing 36 n n C2 N3 5GP doub 37 n n N2 HN21 5GP sing 38 n n N2 HN22 5GP sing 39 n n N3 C4 5GP sing 40 n n # _atom_sites.entry_id 4HIU _atom_sites.fract_transf_matrix[1][1] 0.007157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007157 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C5P A 1 300 300 C5P C5P . C 3 5GP A 1 301 301 5GP 5GP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 5GP . . . C 3 2.989 39.673 22.168 0.5 135.67 ? P 5GP 301 A 1 HETATM 2 O O1P 5GP . . . C 3 4.005 38.559 22.327 0.5 131.54 ? O1P 5GP 301 A 1 HETATM 3 O O2P 5GP . . . C 3 2.248 40.054 23.436 0.5 135.16 ? O2P 5GP 301 A 1 HETATM 4 O O3P 5GP . . . C 3 2.06 39.432 21.001 0.5 134.15 ? O3P 5GP 301 A 1 HETATM 5 O O5' 5GP . . . C 3 3.841 41.009 21.778 1 128.61 ? O5' 5GP 301 A 1 HETATM 6 C C5' 5GP . . . C 3 4.394 41.917 22.753 1 119.72 ? C5' 5GP 301 A 1 HETATM 7 C C4' 5GP . . . C 3 5.66 41.318 23.378 1 112.33 ? C4' 5GP 301 A 1 HETATM 8 O O4' 5GP . . . C 3 6.688 41.262 22.382 1 105.07 ? O4' 5GP 301 A 1 HETATM 9 C C3' 5GP . . . C 3 6.246 42.052 24.589 1 101.58 ? C3' 5GP 301 A 1 HETATM 10 O O3' 5GP . . . C 3 5.812 41.507 25.852 1 87.06 ? O3' 5GP 301 A 1 HETATM 11 C C2' 5GP . . . C 3 7.742 41.871 24.418 1 102.54 ? C2' 5GP 301 A 1 HETATM 12 O O2' 5GP . . . C 3 8.231 40.971 25.413 1 104.64 ? O2' 5GP 301 A 1 HETATM 13 C C1' 5GP . . . C 3 7.964 41.261 23.033 1 105.96 ? C1' 5GP 301 A 1 HETATM 14 N N9 5GP . . . C 3 8.932 42.032 22.204 1 107.69 ? N9 5GP 301 A 1 HETATM 15 C C8 5GP . . . C 3 10.167 41.662 21.771 1 104.16 ? C8 5GP 301 A 1 HETATM 16 N N7 5GP . . . C 3 10.734 42.653 21.027 1 97.15 ? N7 5GP 301 A 1 HETATM 17 C C5 5GP . . . C 3 9.841 43.66 20.982 1 98.96 ? C5 5GP 301 A 1 HETATM 18 C C6 5GP . . . C 3 9.775 45.002 20.382 1 99.18 ? C6 5GP 301 A 1 HETATM 19 O O6 5GP . . . C 3 10.757 45.396 19.712 1 103.07 ? O6 5GP 301 A 1 HETATM 20 N N1 5GP . . . C 3 8.655 45.741 20.58 1 94.62 ? N1 5GP 301 A 1 HETATM 21 C C2 5GP . . . C 3 7.602 45.292 21.309 1 93.51 ? C2 5GP 301 A 1 HETATM 22 N N2 5GP . . . C 3 6.496 46.055 21.487 1 94.33 ? N2 5GP 301 A 1 HETATM 23 N N3 5GP . . . C 3 7.595 44.075 21.888 1 96.37 ? N3 5GP 301 A 1 HETATM 24 C C4 5GP . . . C 3 8.661 43.249 21.753 1 103.3 ? C4 5GP 301 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 24 #