data_4HJI
#
_model_server_result.job_id            4sQn9z-Sp3APzvTB2QqytQ 
_model_server_result.datetime_utc      '2025-02-28 13:09:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hji 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    4HJI 
#
_exptl.entry_id    4HJI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         83.72 
_cell.angle_beta          89.95 
_cell.angle_gamma         74.58 
_cell.entry_id            4HJI 
_cell.length_a            29.99 
_cell.length_b            46.87 
_cell.length_c            51.27 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HJI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OG1 THR 134 B THR 124 1_555 D NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? 
metalc ? metalc2 D NA NA . B NA 201 1_555 F O HOH . B HOH 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4HJI 
_atom_sites.fract_transf_matrix[1][1]    0.033344 
_atom_sites.fract_transf_matrix[1][2]    -0.009197 
_atom_sites.fract_transf_matrix[1][3]    0.001019 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022132 
_atom_sites.fract_transf_matrix[2][3]    -0.002522 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019631 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IMD A 1 201 1 IMD IMD . 
D 3 NA B 1 201 1 NA NA . 
E 4 HOH A 1 301 1 HOH HOH . 
E 4 HOH A 2 302 2 HOH HOH . 
E 4 HOH A 3 303 5 HOH HOH . 
E 4 HOH A 4 304 7 HOH HOH . 
E 4 HOH A 5 305 9 HOH HOH . 
E 4 HOH A 6 306 10 HOH HOH . 
E 4 HOH A 7 307 11 HOH HOH . 
E 4 HOH A 8 308 15 HOH HOH . 
E 4 HOH A 9 309 16 HOH HOH . 
E 4 HOH A 10 310 18 HOH HOH . 
E 4 HOH A 11 311 24 HOH HOH . 
E 4 HOH A 12 312 28 HOH HOH . 
E 4 HOH A 13 313 29 HOH HOH . 
E 4 HOH A 14 314 30 HOH HOH . 
E 4 HOH A 15 315 31 HOH HOH . 
E 4 HOH A 16 316 32 HOH HOH . 
E 4 HOH A 17 317 33 HOH HOH . 
E 4 HOH A 18 318 34 HOH HOH . 
E 4 HOH A 19 319 35 HOH HOH . 
E 4 HOH A 20 320 37 HOH HOH . 
E 4 HOH A 21 321 38 HOH HOH . 
E 4 HOH A 22 322 39 HOH HOH . 
E 4 HOH A 23 323 40 HOH HOH . 
E 4 HOH A 24 324 41 HOH HOH . 
E 4 HOH A 25 325 42 HOH HOH . 
E 4 HOH A 26 326 44 HOH HOH . 
E 4 HOH A 27 327 46 HOH HOH . 
E 4 HOH A 28 328 47 HOH HOH . 
E 4 HOH A 29 329 48 HOH HOH . 
E 4 HOH A 30 330 49 HOH HOH . 
E 4 HOH A 31 331 51 HOH HOH . 
E 4 HOH A 32 332 54 HOH HOH . 
E 4 HOH A 33 333 56 HOH HOH . 
E 4 HOH A 34 334 57 HOH HOH . 
E 4 HOH A 35 335 59 HOH HOH . 
E 4 HOH A 36 336 60 HOH HOH . 
E 4 HOH A 37 337 63 HOH HOH . 
E 4 HOH A 38 338 66 HOH HOH . 
E 4 HOH A 39 339 69 HOH HOH . 
E 4 HOH A 40 340 73 HOH HOH . 
E 4 HOH A 41 341 74 HOH HOH . 
E 4 HOH A 42 342 77 HOH HOH . 
E 4 HOH A 43 343 78 HOH HOH . 
E 4 HOH A 44 344 79 HOH HOH . 
E 4 HOH A 45 345 81 HOH HOH . 
E 4 HOH A 46 346 82 HOH HOH . 
E 4 HOH A 47 347 83 HOH HOH . 
E 4 HOH A 48 348 84 HOH HOH . 
E 4 HOH A 49 349 87 HOH HOH . 
E 4 HOH A 50 350 90 HOH HOH . 
E 4 HOH A 51 351 92 HOH HOH . 
E 4 HOH A 52 352 93 HOH HOH . 
E 4 HOH A 53 353 98 HOH HOH . 
E 4 HOH A 54 354 99 HOH HOH . 
E 4 HOH A 55 355 101 HOH HOH . 
E 4 HOH A 56 356 103 HOH HOH . 
E 4 HOH A 57 357 106 HOH HOH . 
E 4 HOH A 58 358 109 HOH HOH . 
E 4 HOH A 59 359 110 HOH HOH . 
E 4 HOH A 60 360 112 HOH HOH . 
E 4 HOH A 61 361 115 HOH HOH . 
E 4 HOH A 62 362 118 HOH HOH . 
E 4 HOH A 63 363 119 HOH HOH . 
E 4 HOH A 64 364 120 HOH HOH . 
E 4 HOH A 65 365 121 HOH HOH . 
E 4 HOH A 66 366 122 HOH HOH . 
E 4 HOH A 67 367 128 HOH HOH . 
E 4 HOH A 68 368 129 HOH HOH . 
E 4 HOH A 69 369 132 HOH HOH . 
E 4 HOH A 70 370 134 HOH HOH . 
E 4 HOH A 71 371 138 HOH HOH . 
E 4 HOH A 72 372 139 HOH HOH . 
E 4 HOH A 73 373 144 HOH HOH . 
E 4 HOH A 74 374 145 HOH HOH . 
E 4 HOH A 75 375 148 HOH HOH . 
E 4 HOH A 76 376 149 HOH HOH . 
E 4 HOH A 77 377 150 HOH HOH . 
E 4 HOH A 78 378 151 HOH HOH . 
E 4 HOH A 79 379 152 HOH HOH . 
E 4 HOH A 80 380 156 HOH HOH . 
F 4 HOH B 1 301 3 HOH HOH . 
F 4 HOH B 2 302 4 HOH HOH . 
F 4 HOH B 3 303 6 HOH HOH . 
F 4 HOH B 4 304 8 HOH HOH . 
F 4 HOH B 5 305 12 HOH HOH . 
F 4 HOH B 6 306 13 HOH HOH . 
F 4 HOH B 7 307 14 HOH HOH . 
F 4 HOH B 8 308 17 HOH HOH . 
F 4 HOH B 9 309 19 HOH HOH . 
F 4 HOH B 10 310 20 HOH HOH . 
F 4 HOH B 11 311 21 HOH HOH . 
F 4 HOH B 12 312 22 HOH HOH . 
F 4 HOH B 13 313 23 HOH HOH . 
F 4 HOH B 14 314 25 HOH HOH . 
F 4 HOH B 15 315 26 HOH HOH . 
F 4 HOH B 16 316 27 HOH HOH . 
F 4 HOH B 17 317 36 HOH HOH . 
F 4 HOH B 18 318 43 HOH HOH . 
F 4 HOH B 19 319 45 HOH HOH . 
F 4 HOH B 20 320 50 HOH HOH . 
F 4 HOH B 21 321 52 HOH HOH . 
F 4 HOH B 22 322 53 HOH HOH . 
F 4 HOH B 23 323 55 HOH HOH . 
F 4 HOH B 24 324 58 HOH HOH . 
F 4 HOH B 25 325 61 HOH HOH . 
F 4 HOH B 26 326 62 HOH HOH . 
F 4 HOH B 27 327 64 HOH HOH . 
F 4 HOH B 28 328 65 HOH HOH . 
F 4 HOH B 29 329 67 HOH HOH . 
F 4 HOH B 30 330 68 HOH HOH . 
F 4 HOH B 31 331 70 HOH HOH . 
F 4 HOH B 32 332 71 HOH HOH . 
F 4 HOH B 33 333 72 HOH HOH . 
F 4 HOH B 34 334 75 HOH HOH . 
F 4 HOH B 35 335 76 HOH HOH . 
F 4 HOH B 36 336 80 HOH HOH . 
F 4 HOH B 37 337 85 HOH HOH . 
F 4 HOH B 38 338 86 HOH HOH . 
F 4 HOH B 39 339 88 HOH HOH . 
F 4 HOH B 40 340 89 HOH HOH . 
F 4 HOH B 41 341 91 HOH HOH . 
F 4 HOH B 42 342 94 HOH HOH . 
F 4 HOH B 43 343 95 HOH HOH . 
F 4 HOH B 44 344 96 HOH HOH . 
F 4 HOH B 45 345 97 HOH HOH . 
F 4 HOH B 46 346 100 HOH HOH . 
F 4 HOH B 47 347 102 HOH HOH . 
F 4 HOH B 48 348 104 HOH HOH . 
F 4 HOH B 49 349 105 HOH HOH . 
F 4 HOH B 50 350 107 HOH HOH . 
F 4 HOH B 51 351 108 HOH HOH . 
F 4 HOH B 52 352 111 HOH HOH . 
F 4 HOH B 53 353 113 HOH HOH . 
F 4 HOH B 54 354 114 HOH HOH . 
F 4 HOH B 55 355 116 HOH HOH . 
F 4 HOH B 56 356 117 HOH HOH . 
F 4 HOH B 57 357 123 HOH HOH . 
F 4 HOH B 58 358 124 HOH HOH . 
F 4 HOH B 59 359 125 HOH HOH . 
F 4 HOH B 60 360 126 HOH HOH . 
F 4 HOH B 61 361 127 HOH HOH . 
F 4 HOH B 62 362 130 HOH HOH . 
F 4 HOH B 63 363 131 HOH HOH . 
F 4 HOH B 64 364 133 HOH HOH . 
F 4 HOH B 65 365 135 HOH HOH . 
F 4 HOH B 66 366 136 HOH HOH . 
F 4 HOH B 67 367 137 HOH HOH . 
F 4 HOH B 68 368 140 HOH HOH . 
F 4 HOH B 69 369 141 HOH HOH . 
F 4 HOH B 70 370 142 HOH HOH . 
F 4 HOH B 71 371 143 HOH HOH . 
F 4 HOH B 72 372 146 HOH HOH . 
F 4 HOH B 73 373 147 HOH HOH . 
F 4 HOH B 74 374 153 HOH HOH . 
F 4 HOH B 75 375 154 HOH HOH . 
F 4 HOH B 76 376 155 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               8.785 
_atom_site.Cartn_y               -33.731 
_atom_site.Cartn_z               -11.036 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        21.12 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#