data_4HJX # _model_server_result.job_id rLSfYvWnhSw_dHICpglXWw _model_server_result.datetime_utc '2024-10-19 21:23:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hjx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 4HJX # _exptl.entry_id 4HJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 217.169 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,5-difluoro-L-tyrosine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HJX _cell.length_a 101.307 _cell.length_b 101.307 _cell.length_c 71.779 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C9 H9 F2 N O3' _chem_comp.formula_weight 217.169 _chem_comp.id F2Y _chem_comp.mon_nstd_flag n _chem_comp.name 3,5-difluoro-L-tyrosine _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 CE1 F2Y sing 83 n n OH CZ F2Y sing 84 n n CE1 CZ F2Y doub 85 n y CE1 CD1 F2Y sing 86 n y CZ CE2 F2Y sing 87 n y CD1 CG F2Y doub 88 n y CE2 F2 F2Y sing 89 n n CE2 CD2 F2Y doub 90 n y N CA F2Y sing 91 n n CG CD2 F2Y sing 92 n y CG CB F2Y sing 93 n n CB CA F2Y sing 94 n n CA C F2Y sing 95 n n O C F2Y doub 96 n n C OXT F2Y sing 97 n n OXT HXT F2Y sing 98 n n CA HA F2Y sing 99 n n N H F2Y sing 100 n n N H2 F2Y sing 101 n n CB H6 F2Y sing 102 n n CB H7 F2Y sing 103 n n CD1 H8 F2Y sing 104 n n CD2 H9 F2Y sing 105 n n OH H10 F2Y sing 106 n n # _atom_sites.entry_id 4HJX _atom_sites.fract_transf_matrix[1][1] 0.009871 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009871 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 F2Y A 1 401 1 F2Y F2Y . D 2 F2Y B 1 401 1 F2Y F2Y . E 3 HOH A 1 501 2 HOH HOH . E 3 HOH A 2 502 4 HOH HOH . E 3 HOH A 3 503 5 HOH HOH . E 3 HOH A 4 504 7 HOH HOH . E 3 HOH A 5 505 10 HOH HOH . E 3 HOH A 6 506 11 HOH HOH . E 3 HOH A 7 507 12 HOH HOH . E 3 HOH A 8 508 14 HOH HOH . E 3 HOH A 9 509 16 HOH HOH . E 3 HOH A 10 510 20 HOH HOH . E 3 HOH A 11 511 21 HOH HOH . E 3 HOH A 12 512 22 HOH HOH . E 3 HOH A 13 513 24 HOH HOH . E 3 HOH A 14 514 25 HOH HOH . E 3 HOH A 15 515 27 HOH HOH . E 3 HOH A 16 516 32 HOH HOH . E 3 HOH A 17 517 33 HOH HOH . E 3 HOH A 18 518 34 HOH HOH . E 3 HOH A 19 519 35 HOH HOH . E 3 HOH A 20 520 36 HOH HOH . E 3 HOH A 21 521 37 HOH HOH . E 3 HOH A 22 522 39 HOH HOH . E 3 HOH A 23 523 43 HOH HOH . E 3 HOH A 24 524 44 HOH HOH . E 3 HOH A 25 525 45 HOH HOH . E 3 HOH A 26 526 46 HOH HOH . E 3 HOH A 27 527 48 HOH HOH . E 3 HOH A 28 528 49 HOH HOH . E 3 HOH A 29 529 50 HOH HOH . E 3 HOH A 30 530 53 HOH HOH . E 3 HOH A 31 531 55 HOH HOH . E 3 HOH A 32 532 56 HOH HOH . E 3 HOH A 33 533 57 HOH HOH . E 3 HOH A 34 534 58 HOH HOH . E 3 HOH A 35 535 59 HOH HOH . E 3 HOH A 36 536 64 HOH HOH . F 3 HOH B 1 501 1 HOH HOH . F 3 HOH B 2 502 3 HOH HOH . F 3 HOH B 3 503 6 HOH HOH . F 3 HOH B 4 504 8 HOH HOH . F 3 HOH B 5 505 9 HOH HOH . F 3 HOH B 6 506 13 HOH HOH . F 3 HOH B 7 507 15 HOH HOH . F 3 HOH B 8 508 17 HOH HOH . F 3 HOH B 9 509 18 HOH HOH . F 3 HOH B 10 510 19 HOH HOH . F 3 HOH B 11 511 23 HOH HOH . F 3 HOH B 12 512 26 HOH HOH . F 3 HOH B 13 513 28 HOH HOH . F 3 HOH B 14 514 29 HOH HOH . F 3 HOH B 15 515 30 HOH HOH . F 3 HOH B 16 516 31 HOH HOH . F 3 HOH B 17 517 38 HOH HOH . F 3 HOH B 18 518 40 HOH HOH . F 3 HOH B 19 519 41 HOH HOH . F 3 HOH B 20 520 42 HOH HOH . F 3 HOH B 21 521 47 HOH HOH . F 3 HOH B 22 522 51 HOH HOH . F 3 HOH B 23 523 52 HOH HOH . F 3 HOH B 24 524 54 HOH HOH . F 3 HOH B 25 525 60 HOH HOH . F 3 HOH B 26 526 61 HOH HOH . F 3 HOH B 27 527 62 HOH HOH . F 3 HOH B 28 528 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OXT F2Y . . . D 2 14.03 26.454 -38.226 1 13.41 ? OXT F2Y 401 B 1 HETATM 2 C C F2Y . . . D 2 13.006 27.087 -38.56 1 10.68 ? C F2Y 401 B 1 HETATM 3 O O F2Y . . . D 2 12.796 27.607 -39.677 1 9.5 ? O F2Y 401 B 1 HETATM 4 C CA F2Y . . . D 2 11.911 27.241 -37.504 1 13.01 ? CA F2Y 401 B 1 HETATM 5 N N F2Y . . . D 2 12.317 26.541 -36.276 1 15.81 ? N F2Y 401 B 1 HETATM 6 C CB F2Y . . . D 2 11.674 28.727 -37.233 1 11.37 ? CB F2Y 401 B 1 HETATM 7 C CG F2Y . . . D 2 10.679 28.886 -36.275 1 14.54 ? CG F2Y 401 B 1 HETATM 8 C CD1 F2Y . . . D 2 10.939 29.612 -35.114 1 16.26 ? CD1 F2Y 401 B 1 HETATM 9 C CE1 F2Y . . . D 2 9.94 29.775 -34.16 1 13.46 ? CE1 F2Y 401 B 1 HETATM 10 F F1 F2Y . . . D 2 10.173 30.482 -33.02 1 13.25 ? F1 F2Y 401 B 1 HETATM 11 C CD2 F2Y . . . D 2 9.427 28.317 -36.485 1 12.61 ? CD2 F2Y 401 B 1 HETATM 12 C CE2 F2Y . . . D 2 8.421 28.475 -35.539 1 12.9 ? CE2 F2Y 401 B 1 HETATM 13 F F2 F2Y . . . D 2 7.193 27.927 -35.736 1 11.66 ? F2 F2Y 401 B 1 HETATM 14 C CZ F2Y . . . D 2 8.699 29.203 -34.392 1 13.58 ? CZ F2Y 401 B 1 HETATM 15 O OH F2Y . . . D 2 7.722 29.359 -33.458 1 11.51 ? OH F2Y 401 B 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #