data_4HKC
#
_model_server_result.job_id            jObNQYbP8YsobSWCEwr0lw 
_model_server_result.datetime_utc      '2024-12-26 10:45:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hkc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    4HKC 
#
_exptl.entry_id    4HKC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4HKC 
_cell.length_a            89.03 
_cell.length_b            111.6 
_cell.length_c            72.99 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HKC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C LYS 8 B LYS 1010 1_555 B N SEP 9 B SEP 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? 
covale ? covale2 B C SEP 9 B SEP 1011 1_555 B N ILE 10 B ILE 1012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4HKC 
_atom_sites.fract_transf_matrix[1][1]    0.011232 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008961 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013701 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 301 1 GOL GOL . 
D 4 HOH A 1 401 2 HOH HOH . 
D 4 HOH A 2 402 3 HOH HOH . 
D 4 HOH A 3 403 4 HOH HOH . 
D 4 HOH A 4 404 5 HOH HOH . 
D 4 HOH A 5 405 6 HOH HOH . 
D 4 HOH A 6 406 7 HOH HOH . 
D 4 HOH A 7 407 8 HOH HOH . 
D 4 HOH A 8 408 9 HOH HOH . 
D 4 HOH A 9 409 1 HOH HOH . 
D 4 HOH A 10 410 1 HOH HOH . 
D 4 HOH A 11 411 1 HOH HOH . 
D 4 HOH A 12 412 1 HOH HOH . 
D 4 HOH A 13 413 1 HOH HOH . 
D 4 HOH A 14 414 1 HOH HOH . 
D 4 HOH A 15 415 1 HOH HOH . 
D 4 HOH A 16 416 1 HOH HOH . 
D 4 HOH A 17 417 2 HOH HOH . 
D 4 HOH A 18 418 2 HOH HOH . 
D 4 HOH A 19 419 2 HOH HOH . 
D 4 HOH A 20 420 2 HOH HOH . 
D 4 HOH A 21 421 2 HOH HOH . 
D 4 HOH A 22 422 2 HOH HOH . 
D 4 HOH A 23 423 2 HOH HOH . 
D 4 HOH A 24 424 2 HOH HOH . 
D 4 HOH A 25 425 2 HOH HOH . 
D 4 HOH A 26 426 2 HOH HOH . 
D 4 HOH A 27 427 3 HOH HOH . 
D 4 HOH A 28 428 3 HOH HOH . 
D 4 HOH A 29 429 3 HOH HOH . 
D 4 HOH A 30 430 3 HOH HOH . 
D 4 HOH A 31 431 3 HOH HOH . 
D 4 HOH A 32 432 3 HOH HOH . 
D 4 HOH A 33 433 3 HOH HOH . 
D 4 HOH A 34 434 3 HOH HOH . 
D 4 HOH A 35 435 3 HOH HOH . 
D 4 HOH A 36 436 3 HOH HOH . 
D 4 HOH A 37 437 4 HOH HOH . 
D 4 HOH A 38 438 4 HOH HOH . 
D 4 HOH A 39 439 4 HOH HOH . 
D 4 HOH A 40 440 4 HOH HOH . 
D 4 HOH A 41 441 4 HOH HOH . 
D 4 HOH A 42 442 4 HOH HOH . 
D 4 HOH A 43 443 4 HOH HOH . 
D 4 HOH A 44 444 4 HOH HOH . 
D 4 HOH A 45 445 4 HOH HOH . 
D 4 HOH A 46 446 4 HOH HOH . 
D 4 HOH A 47 447 5 HOH HOH . 
D 4 HOH A 48 448 5 HOH HOH . 
D 4 HOH A 49 449 5 HOH HOH . 
D 4 HOH A 50 450 5 HOH HOH . 
D 4 HOH A 51 451 5 HOH HOH . 
D 4 HOH A 52 452 5 HOH HOH . 
D 4 HOH A 53 453 5 HOH HOH . 
D 4 HOH A 54 454 5 HOH HOH . 
D 4 HOH A 55 455 5 HOH HOH . 
D 4 HOH A 56 456 6 HOH HOH . 
D 4 HOH A 57 457 6 HOH HOH . 
D 4 HOH A 58 458 6 HOH HOH . 
D 4 HOH A 59 459 6 HOH HOH . 
D 4 HOH A 60 460 6 HOH HOH . 
D 4 HOH A 61 461 6 HOH HOH . 
D 4 HOH A 62 462 6 HOH HOH . 
D 4 HOH A 63 463 6 HOH HOH . 
D 4 HOH A 64 464 6 HOH HOH . 
D 4 HOH A 65 465 7 HOH HOH . 
D 4 HOH A 66 466 7 HOH HOH . 
D 4 HOH A 67 467 7 HOH HOH . 
D 4 HOH A 68 468 7 HOH HOH . 
D 4 HOH A 69 469 7 HOH HOH . 
D 4 HOH A 70 470 7 HOH HOH . 
D 4 HOH A 71 471 7 HOH HOH . 
D 4 HOH A 72 472 7 HOH HOH . 
D 4 HOH A 73 473 7 HOH HOH . 
D 4 HOH A 74 474 7 HOH HOH . 
D 4 HOH A 75 475 8 HOH HOH . 
D 4 HOH A 76 476 8 HOH HOH . 
D 4 HOH A 77 477 8 HOH HOH . 
D 4 HOH A 78 478 8 HOH HOH . 
D 4 HOH A 79 479 8 HOH HOH . 
D 4 HOH A 80 480 8 HOH HOH . 
D 4 HOH A 81 481 8 HOH HOH . 
D 4 HOH A 82 482 8 HOH HOH . 
D 4 HOH A 83 483 8 HOH HOH . 
D 4 HOH A 84 484 8 HOH HOH . 
D 4 HOH A 85 485 9 HOH HOH . 
D 4 HOH A 86 486 9 HOH HOH . 
D 4 HOH A 87 487 9 HOH HOH . 
D 4 HOH A 88 488 9 HOH HOH . 
D 4 HOH A 89 489 9 HOH HOH . 
D 4 HOH A 90 490 9 HOH HOH . 
D 4 HOH A 91 491 9 HOH HOH . 
D 4 HOH A 92 492 9 HOH HOH . 
D 4 HOH A 93 493 9 HOH HOH . 
D 4 HOH A 94 494 9 HOH HOH . 
D 4 HOH A 95 495 10 HOH HOH . 
D 4 HOH A 96 496 10 HOH HOH . 
D 4 HOH A 97 497 10 HOH HOH . 
D 4 HOH A 98 498 10 HOH HOH . 
D 4 HOH A 99 499 10 HOH HOH . 
D 4 HOH A 100 500 10 HOH HOH . 
D 4 HOH A 101 501 10 HOH HOH . 
D 4 HOH A 102 502 10 HOH HOH . 
D 4 HOH A 103 503 10 HOH HOH . 
D 4 HOH A 104 504 10 HOH HOH . 
D 4 HOH A 105 505 11 HOH HOH . 
D 4 HOH A 106 506 11 HOH HOH . 
D 4 HOH A 107 507 11 HOH HOH . 
D 4 HOH A 108 508 11 HOH HOH . 
D 4 HOH A 109 509 11 HOH HOH . 
D 4 HOH A 110 510 11 HOH HOH . 
D 4 HOH A 111 511 11 HOH HOH . 
D 4 HOH A 112 512 11 HOH HOH . 
D 4 HOH A 113 513 11 HOH HOH . 
D 4 HOH A 114 514 11 HOH HOH . 
D 4 HOH A 115 515 12 HOH HOH . 
E 4 HOH B 1 1101 1 HOH HOH . 
E 4 HOH B 2 1102 1 HOH HOH . 
E 4 HOH B 3 1103 1 HOH HOH . 
E 4 HOH B 4 1104 5 HOH HOH . 
E 4 HOH B 5 1105 6 HOH HOH . 
E 4 HOH B 6 1106 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 1.428 25.557 16.739 1 61.4 ? C1 GOL 301 A 1 
HETATM 2 O O1 GOL . . . C 3 1.376 25.224 15.352 1 57.77 ? O1 GOL 301 A 1 
HETATM 3 C C2 GOL . . . C 3 2.133 26.879 16.959 1 68.16 ? C2 GOL 301 A 1 
HETATM 4 O O2 GOL . . . C 3 2.632 26.93 18.3 1 74.26 ? O2 GOL 301 A 1 
HETATM 5 C C3 GOL . . . C 3 1.289 28.105 16.649 1 67.61 ? C3 GOL 301 A 1 
HETATM 6 O O3 GOL . . . C 3 1.123 29.01 17.751 1 60.65 ? O3 GOL 301 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           6 
#