data_4HL5
#
_model_server_result.job_id            Sf3TsCNgTQ6ekIDCjRR-tw 
_model_server_result.datetime_utc      '2024-11-13 18:44:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hl5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1204}' 
#
_entry.id    4HL5 
#
_exptl.entry_id    4HL5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              268.264 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-hydroxy-2-(4-methoxyphenyl)-4H-chromen-4-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4HL5 
_cell.length_a            67.1 
_cell.length_b            67.1 
_cell.length_c            117.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HL5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
#
_chem_comp.formula           'C16 H12 O4' 
_chem_comp.formula_weight    268.264 
_chem_comp.id                15W 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-hydroxy-2-(4-methoxyphenyl)-4H-chromen-4-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "7-hydroxy-4'-methoxyflavone" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAS OAR 15W sing 1 n n 
OAR CAP 15W sing 2 n n 
CAP CAL 15W doub 3 n y 
CAP CAO 15W sing 4 n y 
CAL CAM 15W sing 5 n y 
CAO CAN 15W doub 6 n y 
CAM CAK 15W doub 7 n y 
CAN CAK 15W sing 8 n y 
CAK CAI 15W sing 9 n n 
CAI OAJ 15W sing 10 n n 
CAI CAH 15W doub 11 n n 
OAJ CAF 15W sing 12 n n 
CAH CAG 15W sing 13 n n 
CAF CAA 15W doub 14 n y 
CAF CAE 15W sing 15 n y 
CAA CAB 15W sing 16 n y 
CAG CAE 15W sing 17 n n 
CAG OAQ 15W doub 18 n n 
CAE CAD 15W doub 19 n y 
CAB OAT 15W sing 20 n n 
CAB CAC 15W doub 21 n y 
CAD CAC 15W sing 22 n y 
CAS H1 15W sing 23 n n 
CAS H2 15W sing 24 n n 
CAS H3 15W sing 25 n n 
CAO H4 15W sing 26 n n 
CAN H5 15W sing 27 n n 
CAL H6 15W sing 28 n n 
CAM H7 15W sing 29 n n 
CAA H8 15W sing 30 n n 
OAT H9 15W sing 31 n n 
CAC H10 15W sing 32 n n 
CAD H11 15W sing 33 n n 
CAH H12 15W sing 34 n n 
#
_atom_sites.entry_id                     4HL5 
_atom_sites.fract_transf_matrix[1][1]    0.014903 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014903 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008532 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 1201 1 SO4 SO4 . 
D 4 ZN A 1 1202 1 ZN ZN . 
E 5 PEG A 1 1203 1 PEG PEG . 
F 6 15W A 1 1204 1 15W 15W . 
G 3 SO4 C 1 1201 2 SO4 SO4 . 
H 7 HOH A 1 1301 1 HOH HOH . 
H 7 HOH A 2 1302 2 HOH HOH . 
H 7 HOH A 3 1303 3 HOH HOH . 
H 7 HOH A 4 1304 5 HOH HOH . 
H 7 HOH A 5 1305 6 HOH HOH . 
H 7 HOH A 6 1306 7 HOH HOH . 
H 7 HOH A 7 1307 8 HOH HOH . 
H 7 HOH A 8 1308 10 HOH HOH . 
H 7 HOH A 9 1309 12 HOH HOH . 
H 7 HOH A 10 1310 13 HOH HOH . 
H 7 HOH A 11 1311 16 HOH HOH . 
H 7 HOH A 12 1312 17 HOH HOH . 
H 7 HOH A 13 1313 18 HOH HOH . 
H 7 HOH A 14 1314 19 HOH HOH . 
H 7 HOH A 15 1315 20 HOH HOH . 
H 7 HOH A 16 1316 21 HOH HOH . 
H 7 HOH A 17 1317 23 HOH HOH . 
H 7 HOH A 18 1318 24 HOH HOH . 
H 7 HOH A 19 1319 26 HOH HOH . 
H 7 HOH A 20 1320 27 HOH HOH . 
H 7 HOH A 21 1321 28 HOH HOH . 
H 7 HOH A 22 1322 29 HOH HOH . 
H 7 HOH A 23 1323 30 HOH HOH . 
H 7 HOH A 24 1324 32 HOH HOH . 
H 7 HOH A 25 1325 33 HOH HOH . 
H 7 HOH A 26 1326 34 HOH HOH . 
H 7 HOH A 27 1327 35 HOH HOH . 
H 7 HOH A 28 1328 36 HOH HOH . 
H 7 HOH A 29 1329 40 HOH HOH . 
H 7 HOH A 30 1330 41 HOH HOH . 
H 7 HOH A 31 1331 43 HOH HOH . 
H 7 HOH A 32 1332 45 HOH HOH . 
H 7 HOH A 33 1333 46 HOH HOH . 
H 7 HOH A 34 1334 47 HOH HOH . 
H 7 HOH A 35 1335 48 HOH HOH . 
H 7 HOH A 36 1336 50 HOH HOH . 
H 7 HOH A 37 1337 51 HOH HOH . 
H 7 HOH A 38 1338 53 HOH HOH . 
H 7 HOH A 39 1339 54 HOH HOH . 
H 7 HOH A 40 1340 55 HOH HOH . 
H 7 HOH A 41 1341 57 HOH HOH . 
H 7 HOH A 42 1342 58 HOH HOH . 
H 7 HOH A 43 1343 59 HOH HOH . 
H 7 HOH A 44 1344 60 HOH HOH . 
H 7 HOH A 45 1345 61 HOH HOH . 
H 7 HOH A 46 1346 63 HOH HOH . 
H 7 HOH A 47 1347 64 HOH HOH . 
H 7 HOH A 48 1348 65 HOH HOH . 
H 7 HOH A 49 1349 66 HOH HOH . 
H 7 HOH A 50 1350 67 HOH HOH . 
H 7 HOH A 51 1351 68 HOH HOH . 
H 7 HOH A 52 1352 70 HOH HOH . 
H 7 HOH A 53 1353 71 HOH HOH . 
H 7 HOH A 54 1354 72 HOH HOH . 
H 7 HOH A 55 1355 73 HOH HOH . 
H 7 HOH A 56 1356 74 HOH HOH . 
H 7 HOH A 57 1357 75 HOH HOH . 
H 7 HOH A 58 1358 77 HOH HOH . 
H 7 HOH A 59 1359 78 HOH HOH . 
H 7 HOH A 60 1360 80 HOH HOH . 
H 7 HOH A 61 1361 81 HOH HOH . 
H 7 HOH A 62 1362 82 HOH HOH . 
H 7 HOH A 63 1363 83 HOH HOH . 
H 7 HOH A 64 1364 84 HOH HOH . 
H 7 HOH A 65 1365 85 HOH HOH . 
I 7 HOH C 1 1301 4 HOH HOH . 
I 7 HOH C 2 1302 9 HOH HOH . 
I 7 HOH C 3 1303 14 HOH HOH . 
I 7 HOH C 4 1304 22 HOH HOH . 
I 7 HOH C 5 1305 25 HOH HOH . 
I 7 HOH C 6 1306 31 HOH HOH . 
I 7 HOH C 7 1307 37 HOH HOH . 
I 7 HOH C 8 1308 38 HOH HOH . 
I 7 HOH C 9 1309 42 HOH HOH . 
I 7 HOH C 10 1310 44 HOH HOH . 
I 7 HOH C 11 1311 49 HOH HOH . 
I 7 HOH C 12 1312 62 HOH HOH . 
I 7 HOH C 13 1313 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAS 15W . . . F 6 -1.356 -10.272 -23.371 1 29.56 ? CAS 15W 1204 A 1 
HETATM 2 O OAR 15W . . . F 6 -2.527 -10.971 -22.972 1 26.31 ? OAR 15W 1204 A 1 
HETATM 3 C CAP 15W . . . F 6 -2.569 -11.192 -21.62 1 26.22 ? CAP 15W 1204 A 1 
HETATM 4 C CAO 15W . . . F 6 -1.441 -11.133 -20.788 1 25.92 ? CAO 15W 1204 A 1 
HETATM 5 C CAN 15W . . . F 6 -1.566 -11.377 -19.414 1 25.89 ? CAN 15W 1204 A 1 
HETATM 6 C CAL 15W . . . F 6 -3.793 -11.513 -21.046 1 24.75 ? CAL 15W 1204 A 1 
HETATM 7 C CAM 15W . . . F 6 -3.916 -11.756 -19.689 1 24.25 ? CAM 15W 1204 A 1 
HETATM 8 C CAK 15W . . . F 6 -2.813 -11.696 -18.843 1 24.84 ? CAK 15W 1204 A 1 
HETATM 9 C CAI 15W . . . F 6 -2.989 -11.944 -17.471 1 25.09 ? CAI 15W 1204 A 1 
HETATM 10 O OAJ 15W . . . F 6 -4.283 -11.977 -17.051 1 25.22 ? OAJ 15W 1204 A 1 
HETATM 11 C CAF 15W . . . F 6 -4.592 -12.211 -15.742 1 26.48 ? CAF 15W 1204 A 1 
HETATM 12 C CAA 15W . . . F 6 -5.922 -12.248 -15.356 1 26.22 ? CAA 15W 1204 A 1 
HETATM 13 C CAB 15W . . . F 6 -6.259 -12.484 -14.022 1 26.78 ? CAB 15W 1204 A 1 
HETATM 14 O OAT 15W . . . F 6 -7.572 -12.493 -13.652 1 25.22 ? OAT 15W 1204 A 1 
HETATM 15 C CAC 15W . . . F 6 -5.25 -12.696 -13.083 1 26.96 ? CAC 15W 1204 A 1 
HETATM 16 C CAD 15W . . . F 6 -3.916 -12.654 -13.473 1 27.25 ? CAD 15W 1204 A 1 
HETATM 17 C CAE 15W . . . F 6 -3.561 -12.409 -14.805 1 26.46 ? CAE 15W 1204 A 1 
HETATM 18 C CAG 15W . . . F 6 -2.214 -12.383 -15.213 1 26.05 ? CAG 15W 1204 A 1 
HETATM 19 O OAQ 15W . . . F 6 -1.265 -12.543 -14.425 1 24.94 ? OAQ 15W 1204 A 1 
HETATM 20 C CAH 15W . . . F 6 -1.948 -12.125 -16.555 1 25.24 ? CAH 15W 1204 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           20 
#