data_4HLG # _model_server_result.job_id Ou_IAhtqWA4fHfbr6yyX8w _model_server_result.datetime_utc '2024-11-13 18:10:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hlg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1201}' # _entry.id 4HLG # _exptl.entry_id 4HLG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HLG _cell.length_a 93.97 _cell.length_b 95.57 _cell.length_c 118.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HLG _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc5 C SG CYS 159 B CYS 1081 1_555 M ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc6 C ND1 HIS 162 B HIS 1084 1_555 M ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc7 C SG CYS 167 B CYS 1089 1_555 M ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc8 C SG CYS 170 B CYS 1092 1_555 M ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 159 n n C1 C2 GOL sing 160 n n C1 H11 GOL sing 161 n n C1 H12 GOL sing 162 n n O1 HO1 GOL sing 163 n n C2 O2 GOL sing 164 n n C2 C3 GOL sing 165 n n C2 H2 GOL sing 166 n n O2 HO2 GOL sing 167 n n C3 O3 GOL sing 168 n n C3 H31 GOL sing 169 n n C3 H32 GOL sing 170 n n O3 HO3 GOL sing 171 n n # _atom_sites.entry_id 4HLG _atom_sites.fract_transf_matrix[1][1] 0.010642 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 1201 1 SO4 SO4 . F 3 SO4 A 1 1202 4 SO4 SO4 . G 4 20B A 1 1203 1 20B 20B . H 5 ZN A 1 1204 1 ZN ZN . I 6 GOL C 1 1201 1 GOL GOL . J 3 SO4 B 1 1201 2 SO4 SO4 . K 3 SO4 B 1 1202 3 SO4 SO4 . L 4 20B B 1 1203 1 20B 20B . M 5 ZN B 1 1204 1 ZN ZN . N 7 HOH A 1 1301 3 HOH HOH . N 7 HOH A 2 1302 7 HOH HOH . N 7 HOH A 3 1303 8 HOH HOH . N 7 HOH A 4 1304 12 HOH HOH . N 7 HOH A 5 1305 13 HOH HOH . N 7 HOH A 6 1306 14 HOH HOH . N 7 HOH A 7 1307 16 HOH HOH . N 7 HOH A 8 1308 17 HOH HOH . N 7 HOH A 9 1309 18 HOH HOH . N 7 HOH A 10 1310 19 HOH HOH . N 7 HOH A 11 1311 20 HOH HOH . N 7 HOH A 12 1312 21 HOH HOH . N 7 HOH A 13 1313 25 HOH HOH . N 7 HOH A 14 1314 26 HOH HOH . N 7 HOH A 15 1315 30 HOH HOH . N 7 HOH A 16 1316 33 HOH HOH . N 7 HOH A 17 1317 34 HOH HOH . N 7 HOH A 18 1318 43 HOH HOH . N 7 HOH A 19 1319 45 HOH HOH . N 7 HOH A 20 1320 48 HOH HOH . N 7 HOH A 21 1321 50 HOH HOH . N 7 HOH A 22 1322 51 HOH HOH . N 7 HOH A 23 1323 55 HOH HOH . N 7 HOH A 24 1324 57 HOH HOH . N 7 HOH A 25 1325 60 HOH HOH . N 7 HOH A 26 1326 61 HOH HOH . N 7 HOH A 27 1327 62 HOH HOH . N 7 HOH A 28 1328 63 HOH HOH . N 7 HOH A 29 1329 65 HOH HOH . N 7 HOH A 30 1330 66 HOH HOH . N 7 HOH A 31 1331 69 HOH HOH . N 7 HOH A 32 1332 71 HOH HOH . N 7 HOH A 33 1333 72 HOH HOH . N 7 HOH A 34 1334 75 HOH HOH . N 7 HOH A 35 1335 79 HOH HOH . N 7 HOH A 36 1336 81 HOH HOH . N 7 HOH A 37 1337 84 HOH HOH . N 7 HOH A 38 1338 85 HOH HOH . N 7 HOH A 39 1339 87 HOH HOH . N 7 HOH A 40 1340 90 HOH HOH . N 7 HOH A 41 1341 93 HOH HOH . N 7 HOH A 42 1342 98 HOH HOH . N 7 HOH A 43 1343 101 HOH HOH . N 7 HOH A 44 1344 102 HOH HOH . N 7 HOH A 45 1345 103 HOH HOH . N 7 HOH A 46 1346 104 HOH HOH . N 7 HOH A 47 1347 105 HOH HOH . N 7 HOH A 48 1348 106 HOH HOH . N 7 HOH A 49 1349 107 HOH HOH . N 7 HOH A 50 1350 109 HOH HOH . N 7 HOH A 51 1351 111 HOH HOH . N 7 HOH A 52 1352 113 HOH HOH . N 7 HOH A 53 1353 118 HOH HOH . N 7 HOH A 54 1354 120 HOH HOH . N 7 HOH A 55 1355 123 HOH HOH . N 7 HOH A 56 1356 124 HOH HOH . N 7 HOH A 57 1357 125 HOH HOH . N 7 HOH A 58 1358 126 HOH HOH . N 7 HOH A 59 1359 134 HOH HOH . N 7 HOH A 60 1360 136 HOH HOH . N 7 HOH A 61 1361 137 HOH HOH . N 7 HOH A 62 1362 139 HOH HOH . N 7 HOH A 63 1363 140 HOH HOH . N 7 HOH A 64 1364 143 HOH HOH . N 7 HOH A 65 1365 144 HOH HOH . N 7 HOH A 66 1366 146 HOH HOH . N 7 HOH A 67 1367 147 HOH HOH . N 7 HOH A 68 1368 148 HOH HOH . N 7 HOH A 69 1369 152 HOH HOH . N 7 HOH A 70 1370 153 HOH HOH . N 7 HOH A 71 1371 154 HOH HOH . N 7 HOH A 72 1372 162 HOH HOH . N 7 HOH A 73 1373 171 HOH HOH . N 7 HOH A 74 1374 172 HOH HOH . N 7 HOH A 75 1375 175 HOH HOH . N 7 HOH A 76 1376 176 HOH HOH . N 7 HOH A 77 1377 178 HOH HOH . N 7 HOH A 78 1378 179 HOH HOH . N 7 HOH A 79 1379 181 HOH HOH . N 7 HOH A 80 1380 182 HOH HOH . N 7 HOH A 81 1381 186 HOH HOH . N 7 HOH A 82 1382 188 HOH HOH . N 7 HOH A 83 1383 189 HOH HOH . N 7 HOH A 84 1384 192 HOH HOH . N 7 HOH A 85 1385 194 HOH HOH . N 7 HOH A 86 1386 195 HOH HOH . N 7 HOH A 87 1387 196 HOH HOH . N 7 HOH A 88 1388 197 HOH HOH . N 7 HOH A 89 1389 198 HOH HOH . N 7 HOH A 90 1390 199 HOH HOH . N 7 HOH A 91 1391 200 HOH HOH . N 7 HOH A 92 1392 204 HOH HOH . N 7 HOH A 93 1393 206 HOH HOH . N 7 HOH A 94 1394 207 HOH HOH . N 7 HOH A 95 1395 208 HOH HOH . N 7 HOH A 96 1396 209 HOH HOH . N 7 HOH A 97 1397 210 HOH HOH . N 7 HOH A 98 1398 212 HOH HOH . N 7 HOH A 99 1399 215 HOH HOH . N 7 HOH A 100 1400 218 HOH HOH . N 7 HOH A 101 1401 219 HOH HOH . N 7 HOH A 102 1402 220 HOH HOH . N 7 HOH A 103 1403 221 HOH HOH . N 7 HOH A 104 1404 222 HOH HOH . N 7 HOH A 105 1405 223 HOH HOH . N 7 HOH A 106 1406 229 HOH HOH . N 7 HOH A 107 1407 231 HOH HOH . N 7 HOH A 108 1408 232 HOH HOH . N 7 HOH A 109 1409 234 HOH HOH . N 7 HOH A 110 1410 236 HOH HOH . N 7 HOH A 111 1411 237 HOH HOH . N 7 HOH A 112 1412 238 HOH HOH . O 7 HOH C 1 1301 28 HOH HOH . O 7 HOH C 2 1302 38 HOH HOH . O 7 HOH C 3 1303 42 HOH HOH . O 7 HOH C 4 1304 44 HOH HOH . O 7 HOH C 5 1305 46 HOH HOH . O 7 HOH C 6 1306 76 HOH HOH . O 7 HOH C 7 1307 129 HOH HOH . O 7 HOH C 8 1308 142 HOH HOH . O 7 HOH C 9 1309 151 HOH HOH . O 7 HOH C 10 1310 161 HOH HOH . O 7 HOH C 11 1311 233 HOH HOH . P 7 HOH B 1 1301 180 HOH HOH . P 7 HOH B 2 1302 1 HOH HOH . P 7 HOH B 3 1303 2 HOH HOH . P 7 HOH B 4 1304 4 HOH HOH . P 7 HOH B 5 1305 6 HOH HOH . P 7 HOH B 6 1306 9 HOH HOH . P 7 HOH B 7 1307 10 HOH HOH . P 7 HOH B 8 1308 11 HOH HOH . P 7 HOH B 9 1309 15 HOH HOH . P 7 HOH B 10 1310 23 HOH HOH . P 7 HOH B 11 1311 27 HOH HOH . P 7 HOH B 12 1312 29 HOH HOH . P 7 HOH B 13 1313 31 HOH HOH . P 7 HOH B 14 1314 32 HOH HOH . P 7 HOH B 15 1315 39 HOH HOH . P 7 HOH B 16 1316 40 HOH HOH . P 7 HOH B 17 1317 47 HOH HOH . P 7 HOH B 18 1318 54 HOH HOH . P 7 HOH B 19 1319 58 HOH HOH . P 7 HOH B 20 1320 59 HOH HOH . P 7 HOH B 21 1321 64 HOH HOH . P 7 HOH B 22 1322 68 HOH HOH . P 7 HOH B 23 1323 70 HOH HOH . P 7 HOH B 24 1324 73 HOH HOH . P 7 HOH B 25 1325 77 HOH HOH . P 7 HOH B 26 1326 78 HOH HOH . P 7 HOH B 27 1327 80 HOH HOH . P 7 HOH B 28 1328 82 HOH HOH . P 7 HOH B 29 1329 86 HOH HOH . P 7 HOH B 30 1330 89 HOH HOH . P 7 HOH B 31 1331 91 HOH HOH . P 7 HOH B 32 1332 92 HOH HOH . P 7 HOH B 33 1333 94 HOH HOH . P 7 HOH B 34 1334 95 HOH HOH . P 7 HOH B 35 1335 96 HOH HOH . P 7 HOH B 36 1336 97 HOH HOH . P 7 HOH B 37 1337 99 HOH HOH . P 7 HOH B 38 1338 100 HOH HOH . P 7 HOH B 39 1339 108 HOH HOH . P 7 HOH B 40 1340 110 HOH HOH . P 7 HOH B 41 1341 112 HOH HOH . P 7 HOH B 42 1342 115 HOH HOH . P 7 HOH B 43 1343 117 HOH HOH . P 7 HOH B 44 1344 119 HOH HOH . P 7 HOH B 45 1345 121 HOH HOH . P 7 HOH B 46 1346 122 HOH HOH . P 7 HOH B 47 1347 127 HOH HOH . P 7 HOH B 48 1348 128 HOH HOH . P 7 HOH B 49 1349 130 HOH HOH . P 7 HOH B 50 1350 131 HOH HOH . P 7 HOH B 51 1351 132 HOH HOH . P 7 HOH B 52 1352 133 HOH HOH . P 7 HOH B 53 1353 138 HOH HOH . P 7 HOH B 54 1354 141 HOH HOH . P 7 HOH B 55 1355 149 HOH HOH . P 7 HOH B 56 1356 150 HOH HOH . P 7 HOH B 57 1357 155 HOH HOH . P 7 HOH B 58 1358 156 HOH HOH . P 7 HOH B 59 1359 157 HOH HOH . P 7 HOH B 60 1360 158 HOH HOH . P 7 HOH B 61 1361 159 HOH HOH . P 7 HOH B 62 1362 163 HOH HOH . P 7 HOH B 63 1363 164 HOH HOH . P 7 HOH B 64 1364 165 HOH HOH . P 7 HOH B 65 1365 166 HOH HOH . P 7 HOH B 66 1366 167 HOH HOH . P 7 HOH B 67 1367 168 HOH HOH . P 7 HOH B 68 1368 169 HOH HOH . P 7 HOH B 69 1369 170 HOH HOH . P 7 HOH B 70 1370 174 HOH HOH . P 7 HOH B 71 1371 183 HOH HOH . P 7 HOH B 72 1372 184 HOH HOH . P 7 HOH B 73 1373 185 HOH HOH . P 7 HOH B 74 1374 187 HOH HOH . P 7 HOH B 75 1375 190 HOH HOH . P 7 HOH B 76 1376 201 HOH HOH . P 7 HOH B 77 1377 202 HOH HOH . P 7 HOH B 78 1378 203 HOH HOH . P 7 HOH B 79 1379 205 HOH HOH . P 7 HOH B 80 1380 211 HOH HOH . P 7 HOH B 81 1381 213 HOH HOH . P 7 HOH B 82 1382 214 HOH HOH . P 7 HOH B 83 1383 216 HOH HOH . P 7 HOH B 84 1384 217 HOH HOH . P 7 HOH B 85 1385 224 HOH HOH . P 7 HOH B 86 1386 225 HOH HOH . P 7 HOH B 87 1387 226 HOH HOH . P 7 HOH B 88 1388 227 HOH HOH . P 7 HOH B 89 1389 228 HOH HOH . P 7 HOH B 90 1390 230 HOH HOH . P 7 HOH B 91 1391 235 HOH HOH . P 7 HOH B 92 1392 239 HOH HOH . P 7 HOH B 93 1393 240 HOH HOH . Q 7 HOH D 1 1201 5 HOH HOH . Q 7 HOH D 2 1202 22 HOH HOH . Q 7 HOH D 3 1203 24 HOH HOH . Q 7 HOH D 4 1204 41 HOH HOH . Q 7 HOH D 5 1205 52 HOH HOH . Q 7 HOH D 6 1206 53 HOH HOH . Q 7 HOH D 7 1207 56 HOH HOH . Q 7 HOH D 8 1208 67 HOH HOH . Q 7 HOH D 9 1209 74 HOH HOH . Q 7 HOH D 10 1210 83 HOH HOH . Q 7 HOH D 11 1211 88 HOH HOH . Q 7 HOH D 12 1212 114 HOH HOH . Q 7 HOH D 13 1213 116 HOH HOH . Q 7 HOH D 14 1214 145 HOH HOH . Q 7 HOH D 15 1215 160 HOH HOH . Q 7 HOH D 16 1216 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 6 -0.425 -23.812 29.146 0.5 20.76 ? C1 GOL 1201 C 1 HETATM 2 O O1 GOL . . . I 6 -1.509 -23.12 29.808 0.5 20.98 ? O1 GOL 1201 C 1 HETATM 3 C C2 GOL . . . I 6 0.796 -23.878 30.064 0.5 20.32 ? C2 GOL 1201 C 1 HETATM 4 O O2 GOL . . . I 6 1.389 -22.574 30.268 0.5 20.8 ? O2 GOL 1201 C 1 HETATM 5 C C3 GOL . . . I 6 0.384 -24.453 31.406 0.5 18.91 ? C3 GOL 1201 C 1 HETATM 6 O O3 GOL . . . I 6 1.537 -25.067 32.019 0.5 18.63 ? O3 GOL 1201 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #