data_4HLM # _model_server_result.job_id qgM158-Oz8b5HZV12792fA _model_server_result.datetime_utc '2024-11-25 00:41:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hlm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1201}' # _entry.id 4HLM # _exptl.entry_id 4HLM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HLM _cell.length_a 93.97 _cell.length_b 95.57 _cell.length_c 118.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HLM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc5 C SG CYS 159 B CYS 1081 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc6 C ND1 HIS 162 B HIS 1084 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc7 C SG CYS 167 B CYS 1089 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc8 C SG CYS 170 B CYS 1092 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4HLM _atom_sites.fract_transf_matrix[1][1] 0.010642 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 1201 2 ZN ZN . F 4 SO4 A 1 1202 1 SO4 SO4 . G 4 SO4 A 1 1203 4 SO4 SO4 . H 5 16S A 1 1204 1 16S 16S . I 6 GOL C 1 1201 1 GOL GOL . J 3 ZN B 1 1201 1 ZN ZN . K 4 SO4 B 1 1202 2 SO4 SO4 . L 4 SO4 B 1 1203 3 SO4 SO4 . M 5 16S B 1 1204 1 16S 16S . N 7 HOH A 1 1301 1 HOH HOH . N 7 HOH A 2 1302 4 HOH HOH . N 7 HOH A 3 1303 9 HOH HOH . N 7 HOH A 4 1304 10 HOH HOH . N 7 HOH A 5 1305 13 HOH HOH . N 7 HOH A 6 1306 15 HOH HOH . N 7 HOH A 7 1307 17 HOH HOH . N 7 HOH A 8 1308 18 HOH HOH . N 7 HOH A 9 1309 19 HOH HOH . N 7 HOH A 10 1310 20 HOH HOH . N 7 HOH A 11 1311 24 HOH HOH . N 7 HOH A 12 1312 27 HOH HOH . N 7 HOH A 13 1313 30 HOH HOH . N 7 HOH A 14 1314 32 HOH HOH . N 7 HOH A 15 1315 33 HOH HOH . N 7 HOH A 16 1316 36 HOH HOH . N 7 HOH A 17 1317 37 HOH HOH . N 7 HOH A 18 1318 39 HOH HOH . N 7 HOH A 19 1319 44 HOH HOH . N 7 HOH A 20 1320 45 HOH HOH . N 7 HOH A 21 1321 48 HOH HOH . N 7 HOH A 22 1322 52 HOH HOH . N 7 HOH A 23 1323 58 HOH HOH . N 7 HOH A 24 1324 60 HOH HOH . N 7 HOH A 25 1325 63 HOH HOH . N 7 HOH A 26 1326 67 HOH HOH . N 7 HOH A 27 1327 68 HOH HOH . N 7 HOH A 28 1328 70 HOH HOH . N 7 HOH A 29 1329 71 HOH HOH . N 7 HOH A 30 1330 75 HOH HOH . N 7 HOH A 31 1331 76 HOH HOH . N 7 HOH A 32 1332 78 HOH HOH . N 7 HOH A 33 1333 79 HOH HOH . N 7 HOH A 34 1334 80 HOH HOH . N 7 HOH A 35 1335 81 HOH HOH . N 7 HOH A 36 1336 86 HOH HOH . N 7 HOH A 37 1337 87 HOH HOH . N 7 HOH A 38 1338 88 HOH HOH . N 7 HOH A 39 1339 90 HOH HOH . N 7 HOH A 40 1340 91 HOH HOH . N 7 HOH A 41 1341 93 HOH HOH . N 7 HOH A 42 1342 102 HOH HOH . N 7 HOH A 43 1343 103 HOH HOH . N 7 HOH A 44 1344 104 HOH HOH . N 7 HOH A 45 1345 107 HOH HOH . N 7 HOH A 46 1346 108 HOH HOH . N 7 HOH A 47 1347 109 HOH HOH . N 7 HOH A 48 1348 110 HOH HOH . N 7 HOH A 49 1349 111 HOH HOH . N 7 HOH A 50 1350 112 HOH HOH . N 7 HOH A 51 1351 113 HOH HOH . N 7 HOH A 52 1352 114 HOH HOH . N 7 HOH A 53 1353 118 HOH HOH . N 7 HOH A 54 1354 120 HOH HOH . N 7 HOH A 55 1355 121 HOH HOH . N 7 HOH A 56 1356 125 HOH HOH . N 7 HOH A 57 1357 126 HOH HOH . N 7 HOH A 58 1358 133 HOH HOH . N 7 HOH A 59 1359 137 HOH HOH . N 7 HOH A 60 1360 138 HOH HOH . N 7 HOH A 61 1361 139 HOH HOH . N 7 HOH A 62 1362 141 HOH HOH . N 7 HOH A 63 1363 142 HOH HOH . N 7 HOH A 64 1364 143 HOH HOH . N 7 HOH A 65 1365 146 HOH HOH . N 7 HOH A 66 1366 149 HOH HOH . N 7 HOH A 67 1367 151 HOH HOH . N 7 HOH A 68 1368 154 HOH HOH . N 7 HOH A 69 1369 156 HOH HOH . N 7 HOH A 70 1370 157 HOH HOH . N 7 HOH A 71 1371 161 HOH HOH . N 7 HOH A 72 1372 164 HOH HOH . N 7 HOH A 73 1373 168 HOH HOH . N 7 HOH A 74 1374 169 HOH HOH . N 7 HOH A 75 1375 173 HOH HOH . N 7 HOH A 76 1376 174 HOH HOH . N 7 HOH A 77 1377 175 HOH HOH . N 7 HOH A 78 1378 176 HOH HOH . N 7 HOH A 79 1379 178 HOH HOH . N 7 HOH A 80 1380 180 HOH HOH . N 7 HOH A 81 1381 181 HOH HOH . N 7 HOH A 82 1382 182 HOH HOH . N 7 HOH A 83 1383 184 HOH HOH . N 7 HOH A 84 1384 188 HOH HOH . N 7 HOH A 85 1385 189 HOH HOH . N 7 HOH A 86 1386 190 HOH HOH . N 7 HOH A 87 1387 191 HOH HOH . N 7 HOH A 88 1388 192 HOH HOH . N 7 HOH A 89 1389 193 HOH HOH . N 7 HOH A 90 1390 194 HOH HOH . N 7 HOH A 91 1391 195 HOH HOH . N 7 HOH A 92 1392 197 HOH HOH . N 7 HOH A 93 1393 199 HOH HOH . N 7 HOH A 94 1394 202 HOH HOH . N 7 HOH A 95 1395 203 HOH HOH . N 7 HOH A 96 1396 205 HOH HOH . N 7 HOH A 97 1397 206 HOH HOH . N 7 HOH A 98 1398 214 HOH HOH . N 7 HOH A 99 1399 215 HOH HOH . N 7 HOH A 100 1400 216 HOH HOH . N 7 HOH A 101 1401 217 HOH HOH . N 7 HOH A 102 1402 218 HOH HOH . N 7 HOH A 103 1403 219 HOH HOH . N 7 HOH A 104 1404 223 HOH HOH . N 7 HOH A 105 1405 224 HOH HOH . N 7 HOH A 106 1406 225 HOH HOH . N 7 HOH A 107 1407 226 HOH HOH . N 7 HOH A 108 1408 227 HOH HOH . N 7 HOH A 109 1409 228 HOH HOH . N 7 HOH A 110 1410 231 HOH HOH . N 7 HOH A 111 1411 233 HOH HOH . N 7 HOH A 112 1412 234 HOH HOH . N 7 HOH A 113 1413 235 HOH HOH . N 7 HOH A 114 1414 242 HOH HOH . N 7 HOH A 115 1415 245 HOH HOH . N 7 HOH A 116 1416 254 HOH HOH . N 7 HOH A 117 1417 255 HOH HOH . N 7 HOH A 118 1418 257 HOH HOH . O 7 HOH C 1 1301 2 HOH HOH . O 7 HOH C 2 1302 6 HOH HOH . O 7 HOH C 3 1303 21 HOH HOH . O 7 HOH C 4 1304 62 HOH HOH . O 7 HOH C 5 1305 66 HOH HOH . O 7 HOH C 6 1306 77 HOH HOH . O 7 HOH C 7 1307 96 HOH HOH . O 7 HOH C 8 1308 160 HOH HOH . O 7 HOH C 9 1309 162 HOH HOH . O 7 HOH C 10 1310 165 HOH HOH . O 7 HOH C 11 1311 171 HOH HOH . O 7 HOH C 12 1312 179 HOH HOH . O 7 HOH C 13 1313 240 HOH HOH . O 7 HOH C 14 1314 243 HOH HOH . O 7 HOH C 15 1315 250 HOH HOH . O 7 HOH C 16 1316 253 HOH HOH . P 7 HOH B 1 1301 185 HOH HOH . P 7 HOH B 2 1302 5 HOH HOH . P 7 HOH B 3 1303 8 HOH HOH . P 7 HOH B 4 1304 11 HOH HOH . P 7 HOH B 5 1305 16 HOH HOH . P 7 HOH B 6 1306 22 HOH HOH . P 7 HOH B 7 1307 23 HOH HOH . P 7 HOH B 8 1308 25 HOH HOH . P 7 HOH B 9 1309 28 HOH HOH . P 7 HOH B 10 1310 29 HOH HOH . P 7 HOH B 11 1311 34 HOH HOH . P 7 HOH B 12 1312 35 HOH HOH . P 7 HOH B 13 1313 38 HOH HOH . P 7 HOH B 14 1314 43 HOH HOH . P 7 HOH B 15 1315 46 HOH HOH . P 7 HOH B 16 1316 47 HOH HOH . P 7 HOH B 17 1317 49 HOH HOH . P 7 HOH B 18 1318 50 HOH HOH . P 7 HOH B 19 1319 51 HOH HOH . P 7 HOH B 20 1320 53 HOH HOH . P 7 HOH B 21 1321 54 HOH HOH . P 7 HOH B 22 1322 55 HOH HOH . P 7 HOH B 23 1323 56 HOH HOH . P 7 HOH B 24 1324 57 HOH HOH . P 7 HOH B 25 1325 59 HOH HOH . P 7 HOH B 26 1326 61 HOH HOH . P 7 HOH B 27 1327 65 HOH HOH . P 7 HOH B 28 1328 69 HOH HOH . P 7 HOH B 29 1329 72 HOH HOH . P 7 HOH B 30 1330 73 HOH HOH . P 7 HOH B 31 1331 74 HOH HOH . P 7 HOH B 32 1332 84 HOH HOH . P 7 HOH B 33 1333 85 HOH HOH . P 7 HOH B 34 1334 89 HOH HOH . P 7 HOH B 35 1335 92 HOH HOH . P 7 HOH B 36 1336 94 HOH HOH . P 7 HOH B 37 1337 95 HOH HOH . P 7 HOH B 38 1338 97 HOH HOH . P 7 HOH B 39 1339 99 HOH HOH . P 7 HOH B 40 1340 100 HOH HOH . P 7 HOH B 41 1341 101 HOH HOH . P 7 HOH B 42 1342 106 HOH HOH . P 7 HOH B 43 1343 115 HOH HOH . P 7 HOH B 44 1344 116 HOH HOH . P 7 HOH B 45 1345 117 HOH HOH . P 7 HOH B 46 1346 119 HOH HOH . P 7 HOH B 47 1347 122 HOH HOH . P 7 HOH B 48 1348 123 HOH HOH . P 7 HOH B 49 1349 124 HOH HOH . P 7 HOH B 50 1350 127 HOH HOH . P 7 HOH B 51 1351 128 HOH HOH . P 7 HOH B 52 1352 129 HOH HOH . P 7 HOH B 53 1353 130 HOH HOH . P 7 HOH B 54 1354 131 HOH HOH . P 7 HOH B 55 1355 132 HOH HOH . P 7 HOH B 56 1356 134 HOH HOH . P 7 HOH B 57 1357 135 HOH HOH . P 7 HOH B 58 1358 136 HOH HOH . P 7 HOH B 59 1359 140 HOH HOH . P 7 HOH B 60 1360 147 HOH HOH . P 7 HOH B 61 1361 148 HOH HOH . P 7 HOH B 62 1362 150 HOH HOH . P 7 HOH B 63 1363 153 HOH HOH . P 7 HOH B 64 1364 155 HOH HOH . P 7 HOH B 65 1365 158 HOH HOH . P 7 HOH B 66 1366 159 HOH HOH . P 7 HOH B 67 1367 166 HOH HOH . P 7 HOH B 68 1368 167 HOH HOH . P 7 HOH B 69 1369 170 HOH HOH . P 7 HOH B 70 1370 177 HOH HOH . P 7 HOH B 71 1371 183 HOH HOH . P 7 HOH B 72 1372 186 HOH HOH . P 7 HOH B 73 1373 187 HOH HOH . P 7 HOH B 74 1374 196 HOH HOH . P 7 HOH B 75 1375 198 HOH HOH . P 7 HOH B 76 1376 200 HOH HOH . P 7 HOH B 77 1377 201 HOH HOH . P 7 HOH B 78 1378 204 HOH HOH . P 7 HOH B 79 1379 208 HOH HOH . P 7 HOH B 80 1380 209 HOH HOH . P 7 HOH B 81 1381 210 HOH HOH . P 7 HOH B 82 1382 211 HOH HOH . P 7 HOH B 83 1383 212 HOH HOH . P 7 HOH B 84 1384 213 HOH HOH . P 7 HOH B 85 1385 220 HOH HOH . P 7 HOH B 86 1386 230 HOH HOH . P 7 HOH B 87 1387 232 HOH HOH . P 7 HOH B 88 1388 237 HOH HOH . P 7 HOH B 89 1389 238 HOH HOH . P 7 HOH B 90 1390 239 HOH HOH . P 7 HOH B 91 1391 241 HOH HOH . P 7 HOH B 92 1392 244 HOH HOH . P 7 HOH B 93 1393 246 HOH HOH . P 7 HOH B 94 1394 249 HOH HOH . P 7 HOH B 95 1395 251 HOH HOH . P 7 HOH B 96 1396 252 HOH HOH . P 7 HOH B 97 1397 256 HOH HOH . P 7 HOH B 98 1398 258 HOH HOH . P 7 HOH B 99 1399 259 HOH HOH . P 7 HOH B 100 1400 260 HOH HOH . P 7 HOH B 101 1401 261 HOH HOH . P 7 HOH B 102 1402 263 HOH HOH . Q 7 HOH D 1 1201 3 HOH HOH . Q 7 HOH D 2 1202 12 HOH HOH . Q 7 HOH D 3 1203 14 HOH HOH . Q 7 HOH D 4 1204 26 HOH HOH . Q 7 HOH D 5 1205 40 HOH HOH . Q 7 HOH D 6 1206 41 HOH HOH . Q 7 HOH D 7 1207 42 HOH HOH . Q 7 HOH D 8 1208 64 HOH HOH . Q 7 HOH D 9 1209 82 HOH HOH . Q 7 HOH D 10 1210 83 HOH HOH . Q 7 HOH D 11 1211 98 HOH HOH . Q 7 HOH D 12 1212 144 HOH HOH . Q 7 HOH D 13 1213 152 HOH HOH . Q 7 HOH D 14 1214 172 HOH HOH . Q 7 HOH D 15 1215 207 HOH HOH . Q 7 HOH D 16 1216 222 HOH HOH . Q 7 HOH D 17 1217 247 HOH HOH . Q 7 HOH D 18 1218 248 HOH HOH . Q 7 HOH D 19 1219 262 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.002 _atom_site.Cartn_y 24.821 _atom_site.Cartn_z -21.405 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #