data_4HLQ
#
_model_server_result.job_id            9xcFfTmqk4u8H2FHILWxsA 
_model_server_result.datetime_utc      '2025-02-05 16:01:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hlq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"DA","auth_seq_id":203}' 
#
_entry.id    4HLQ 
#
_exptl.entry_id    4HLQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              66.007 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'BERYLLIUM TRIFLUORIDE ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4HLQ 
_cell.length_a            88.17 
_cell.length_b            118.64 
_cell.length_c            290.11 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HLQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
PISA dimeric 2 author_and_software_defined_assembly 5 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,K,L,M,N,EA,FA 1 1 
C,D,O,P,Q,R,GA,HA 2 1 
E,F,S,T,U,V,W,IA,JA 3 1 
G,H,X,Y,Z,KA,LA 4 1 
I,J,AA,BA,CA,DA,MA,NA 5 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 N N N 
? 6 R N N 
? 6 W N N 
? 6 Z N N 
? 6 DA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OG SER 23 B SER 22 1_555 L MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc2 B OG1 THR 41 B THR 40 1_555 L MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc3 L MG MG . B MG 201 1_555 M O2B GDP . B GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc4 M O1B GDP . B GDP 202 1_555 N BE BEF . B BEF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc5 D OG SER 23 D SER 22 1_555 P MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc6 D OG1 THR 41 D THR 40 1_555 P MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? 
metalc ? metalc7 Q O3B GDP . D GDP 202 1_555 R BE BEF . D BEF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? 
metalc ? metalc8 F OG SER 23 F SER 22 1_555 U MG MG . F MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc9 F OG1 THR 41 F THR 40 1_555 U MG MG . F MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc10 U MG MG . F MG 201 1_555 V O3B GDP . F GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? 
metalc ? metalc11 V O2B GDP . F GDP 202 1_555 W BE BEF . F BEF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.779 ? 
metalc ? metalc12 H OG SER 23 H SER 22 1_555 X MG MG . H MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc13 H OG1 THR 41 H THR 40 1_555 X MG MG . H MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc14 X MG MG . H MG 201 1_555 Y O3B GDP . H GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc15 X MG MG . H MG 201 1_555 Y O2B GDP . H GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
metalc ? metalc16 Y O2B GDP . H GDP 202 1_555 Z BE BEF . H BEF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc17 J OG SER 23 J SER 22 1_555 BA MG MG . J MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? 
metalc ? metalc18 J OG1 THR 41 J THR 40 1_555 BA MG MG . J MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.704 ? 
metalc ? metalc19 BA MG MG . J MG 201 1_555 CA O3B GDP . J GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc20 CA O3B GDP . J GDP 202 1_555 DA BE BEF . J BEF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
#
_chem_comp.formula           'Be F3 -1' 
_chem_comp.formula_weight    66.007 
_chem_comp.id                BEF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'BERYLLIUM TRIFLUORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
BE F1 BEF sing 70 n n 
BE F2 BEF sing 71 n n 
BE F3 BEF sing 72 n n 
#
_atom_sites.entry_id                     4HLQ 
_atom_sites.fract_transf_matrix[1][1]    0.011342 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008429 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003447 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 3 SO4 A 1 401 1 SO4 SO4 . 
L 4 MG B 1 201 1 MG MG . 
M 5 GDP B 1 202 1 GDP GDP . 
N 6 BEF B 1 203 1 BEF BEF . 
O 3 SO4 C 1 401 2 SO4 SO4 . 
P 4 MG D 1 201 2 MG MG . 
Q 5 GDP D 1 202 2 GDP GDP . 
R 6 BEF D 1 203 2 BEF BEF . 
S 3 SO4 E 1 401 3 SO4 SO4 . 
T 3 SO4 E 1 402 4 SO4 SO4 . 
U 4 MG F 1 201 3 MG MG . 
V 5 GDP F 1 202 3 GDP GDP . 
W 6 BEF F 1 203 3 BEF BEF . 
X 4 MG H 1 201 4 MG MG . 
Y 5 GDP H 1 202 4 GDP GDP . 
Z 6 BEF H 1 203 4 BEF BEF . 
AA 3 SO4 I 1 401 5 SO4 SO4 . 
BA 4 MG J 1 201 5 MG MG . 
CA 5 GDP J 1 202 5 GDP GDP . 
DA 6 BEF J 1 203 5 BEF BEF . 
EA 7 HOH A 1 501 9 HOH HOH . 
EA 7 HOH A 2 502 17 HOH HOH . 
EA 7 HOH A 3 503 19 HOH HOH . 
EA 7 HOH A 4 504 22 HOH HOH . 
EA 7 HOH A 5 505 26 HOH HOH . 
EA 7 HOH A 6 506 27 HOH HOH . 
EA 7 HOH A 7 507 40 HOH HOH . 
EA 7 HOH A 8 508 44 HOH HOH . 
EA 7 HOH A 9 509 47 HOH HOH . 
FA 7 HOH B 1 301 7 HOH HOH . 
FA 7 HOH B 2 302 11 HOH HOH . 
FA 7 HOH B 3 303 43 HOH HOH . 
FA 7 HOH B 4 304 45 HOH HOH . 
GA 7 HOH C 1 501 1 HOH HOH . 
GA 7 HOH C 2 502 10 HOH HOH . 
GA 7 HOH C 3 503 18 HOH HOH . 
GA 7 HOH C 4 504 20 HOH HOH . 
GA 7 HOH C 5 505 41 HOH HOH . 
GA 7 HOH C 6 506 42 HOH HOH . 
GA 7 HOH C 7 507 46 HOH HOH . 
HA 7 HOH D 1 301 8 HOH HOH . 
HA 7 HOH D 2 302 14 HOH HOH . 
HA 7 HOH D 3 303 31 HOH HOH . 
HA 7 HOH D 4 304 38 HOH HOH . 
IA 7 HOH E 1 501 2 HOH HOH . 
IA 7 HOH E 2 502 16 HOH HOH . 
IA 7 HOH E 3 503 21 HOH HOH . 
IA 7 HOH E 4 504 23 HOH HOH . 
IA 7 HOH E 5 505 25 HOH HOH . 
IA 7 HOH E 6 506 32 HOH HOH . 
IA 7 HOH E 7 507 37 HOH HOH . 
IA 7 HOH E 8 508 51 HOH HOH . 
JA 7 HOH F 1 301 13 HOH HOH . 
JA 7 HOH F 2 302 30 HOH HOH . 
JA 7 HOH F 3 303 48 HOH HOH . 
JA 7 HOH F 4 304 50 HOH HOH . 
KA 7 HOH G 1 401 3 HOH HOH . 
KA 7 HOH G 2 402 12 HOH HOH . 
KA 7 HOH G 3 403 24 HOH HOH . 
KA 7 HOH G 4 404 35 HOH HOH . 
LA 7 HOH H 1 301 28 HOH HOH . 
LA 7 HOH H 2 302 36 HOH HOH . 
MA 7 HOH I 1 501 4 HOH HOH . 
MA 7 HOH I 2 502 5 HOH HOH . 
MA 7 HOH I 3 503 6 HOH HOH . 
MA 7 HOH I 4 504 15 HOH HOH . 
MA 7 HOH I 5 505 33 HOH HOH . 
MA 7 HOH I 6 506 34 HOH HOH . 
MA 7 HOH I 7 507 49 HOH HOH . 
NA 7 HOH J 1 301 29 HOH HOH . 
NA 7 HOH J 2 302 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 BE BE BEF . . . DA 6 -44.011 61.167 -6.254 1 96.03 ? BE BEF 203 J 1 
HETATM 2 F F1 BEF . . . DA 6 -45.523 60.977 -6.36 1 96.59 ? F1 BEF 203 J 1 
HETATM 3 F F2 BEF . . . DA 6 -43.261 60.195 -7.22 1 95.43 ? F2 BEF 203 J 1 
HETATM 4 F F3 BEF . . . DA 6 -43.681 62.609 -6.694 1 96.25 ? F3 BEF 203 J 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#