data_4HLU
#
_model_server_result.job_id            ElfBDJ9X12JFr9N0Z8WXtQ 
_model_server_result.datetime_utc      '2024-12-01 02:27:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hlu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1301}' 
#
_entry.id    4HLU 
#
_exptl.entry_id    4HLU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4HLU 
_cell.length_a            67.785 
_cell.length_b            67.785 
_cell.length_c            252.509 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HLU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,N,O 1 1 
C,D,I,J,K,L,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 266 A CYS 264 1_555 B SG CYS 246 D CYS 1237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
disulf ? disulf2 C SG CYS 266 B CYS 264 1_555 D SG CYS 246 C CYS 1237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 7 n n 
PB O2B ADP sing 8 n n 
PB O3B ADP sing 9 n n 
PB O3A ADP sing 10 n n 
O2B HOB2 ADP sing 11 n n 
O3B HOB3 ADP sing 12 n n 
PA O1A ADP doub 13 n n 
PA O2A ADP sing 14 n n 
PA O3A ADP sing 15 n n 
PA O5' ADP sing 16 n n 
O2A HOA2 ADP sing 17 n n 
O5' C5' ADP sing 18 n n 
C5' C4' ADP sing 19 n n 
C5' "H5'1" ADP sing 20 n n 
C5' "H5'2" ADP sing 21 n n 
C4' O4' ADP sing 22 n n 
C4' C3' ADP sing 23 n n 
C4' H4' ADP sing 24 n n 
O4' C1' ADP sing 25 n n 
C3' O3' ADP sing 26 n n 
C3' C2' ADP sing 27 n n 
C3' H3' ADP sing 28 n n 
O3' HO3' ADP sing 29 n n 
C2' O2' ADP sing 30 n n 
C2' C1' ADP sing 31 n n 
C2' H2' ADP sing 32 n n 
O2' HO2' ADP sing 33 n n 
C1' N9 ADP sing 34 n n 
C1' H1' ADP sing 35 n n 
N9 C8 ADP sing 36 n y 
N9 C4 ADP sing 37 n y 
C8 N7 ADP doub 38 n y 
C8 H8 ADP sing 39 n n 
N7 C5 ADP sing 40 n y 
C5 C6 ADP sing 41 n y 
C5 C4 ADP doub 42 n y 
C6 N6 ADP sing 43 n n 
C6 N1 ADP doub 44 n y 
N6 HN61 ADP sing 45 n n 
N6 HN62 ADP sing 46 n n 
N1 C2 ADP sing 47 n y 
C2 N3 ADP doub 48 n y 
C2 H2 ADP sing 49 n n 
N3 C4 ADP sing 50 n y 
#
_atom_sites.entry_id                     4HLU 
_atom_sites.fract_transf_matrix[1][1]    0.014753 
_atom_sites.fract_transf_matrix[1][2]    0.008517 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017035 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00396 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ADP A 1 301 300 ADP ADP . 
F 4 ACT A 1 302 402 ACT ACT . 
G 3 ADP D 1 1301 300 ADP ADP . 
H 4 ACT D 1 1302 401 ACT ACT . 
I 3 ADP B 1 301 300 ADP ADP . 
J 4 ACT B 1 302 403 ACT ACT . 
K 3 ADP C 1 1301 300 ADP ADP . 
L 4 ACT C 1 1302 400 ACT ACT . 
M 4 ACT C 1 1303 407 ACT ACT . 
N 5 HOH A 1 401 3 HOH HOH . 
N 5 HOH A 2 402 7 HOH HOH . 
N 5 HOH A 3 403 9 HOH HOH . 
N 5 HOH A 4 404 10 HOH HOH . 
N 5 HOH A 5 405 12 HOH HOH . 
N 5 HOH A 6 406 28 HOH HOH . 
N 5 HOH A 7 407 38 HOH HOH . 
N 5 HOH A 8 408 39 HOH HOH . 
N 5 HOH A 9 409 40 HOH HOH . 
N 5 HOH A 10 410 41 HOH HOH . 
N 5 HOH A 11 411 42 HOH HOH . 
N 5 HOH A 12 412 45 HOH HOH . 
N 5 HOH A 13 413 50 HOH HOH . 
N 5 HOH A 14 414 51 HOH HOH . 
N 5 HOH A 15 415 54 HOH HOH . 
N 5 HOH A 16 416 55 HOH HOH . 
N 5 HOH A 17 417 58 HOH HOH . 
N 5 HOH A 18 418 72 HOH HOH . 
N 5 HOH A 19 419 80 HOH HOH . 
N 5 HOH A 20 420 86 HOH HOH . 
N 5 HOH A 21 421 87 HOH HOH . 
O 5 HOH D 1 1401 1 HOH HOH . 
O 5 HOH D 2 1402 2 HOH HOH . 
O 5 HOH D 3 1403 5 HOH HOH . 
O 5 HOH D 4 1404 16 HOH HOH . 
O 5 HOH D 5 1405 20 HOH HOH . 
O 5 HOH D 6 1406 23 HOH HOH . 
O 5 HOH D 7 1407 29 HOH HOH . 
O 5 HOH D 8 1408 31 HOH HOH . 
O 5 HOH D 9 1409 34 HOH HOH . 
O 5 HOH D 10 1410 43 HOH HOH . 
O 5 HOH D 11 1411 44 HOH HOH . 
O 5 HOH D 12 1412 46 HOH HOH . 
O 5 HOH D 13 1413 47 HOH HOH . 
O 5 HOH D 14 1414 56 HOH HOH . 
O 5 HOH D 15 1415 62 HOH HOH . 
O 5 HOH D 16 1416 63 HOH HOH . 
O 5 HOH D 17 1417 65 HOH HOH . 
O 5 HOH D 18 1418 66 HOH HOH . 
O 5 HOH D 19 1419 67 HOH HOH . 
O 5 HOH D 20 1420 74 HOH HOH . 
O 5 HOH D 21 1421 76 HOH HOH . 
O 5 HOH D 22 1422 77 HOH HOH . 
O 5 HOH D 23 1423 82 HOH HOH . 
P 5 HOH B 1 401 11 HOH HOH . 
P 5 HOH B 2 402 14 HOH HOH . 
P 5 HOH B 3 403 19 HOH HOH . 
P 5 HOH B 4 404 21 HOH HOH . 
P 5 HOH B 5 405 22 HOH HOH . 
P 5 HOH B 6 406 24 HOH HOH . 
P 5 HOH B 7 407 35 HOH HOH . 
P 5 HOH B 8 408 36 HOH HOH . 
P 5 HOH B 9 409 49 HOH HOH . 
P 5 HOH B 10 410 52 HOH HOH . 
P 5 HOH B 11 411 59 HOH HOH . 
P 5 HOH B 12 412 64 HOH HOH . 
P 5 HOH B 13 413 68 HOH HOH . 
P 5 HOH B 14 414 70 HOH HOH . 
P 5 HOH B 15 415 71 HOH HOH . 
P 5 HOH B 16 416 73 HOH HOH . 
P 5 HOH B 17 417 75 HOH HOH . 
P 5 HOH B 18 418 78 HOH HOH . 
P 5 HOH B 19 419 79 HOH HOH . 
P 5 HOH B 20 420 81 HOH HOH . 
P 5 HOH B 21 421 83 HOH HOH . 
Q 5 HOH C 1 1401 4 HOH HOH . 
Q 5 HOH C 2 1402 6 HOH HOH . 
Q 5 HOH C 3 1403 8 HOH HOH . 
Q 5 HOH C 4 1404 13 HOH HOH . 
Q 5 HOH C 5 1405 15 HOH HOH . 
Q 5 HOH C 6 1406 17 HOH HOH . 
Q 5 HOH C 7 1407 18 HOH HOH . 
Q 5 HOH C 8 1408 25 HOH HOH . 
Q 5 HOH C 9 1409 26 HOH HOH . 
Q 5 HOH C 10 1410 27 HOH HOH . 
Q 5 HOH C 11 1411 30 HOH HOH . 
Q 5 HOH C 12 1412 32 HOH HOH . 
Q 5 HOH C 13 1413 33 HOH HOH . 
Q 5 HOH C 14 1414 37 HOH HOH . 
Q 5 HOH C 15 1415 48 HOH HOH . 
Q 5 HOH C 16 1416 53 HOH HOH . 
Q 5 HOH C 17 1417 57 HOH HOH . 
Q 5 HOH C 18 1418 60 HOH HOH . 
Q 5 HOH C 19 1419 61 HOH HOH . 
Q 5 HOH C 20 1420 69 HOH HOH . 
Q 5 HOH C 21 1421 84 HOH HOH . 
Q 5 HOH C 22 1422 85 HOH HOH . 
Q 5 HOH C 23 1423 88 HOH HOH . 
Q 5 HOH C 24 1424 89 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . K 3 68.75 36.832 -19.929 1 51.45 ? PB ADP 1301 C 1 
HETATM 2 O O1B ADP . . . K 3 68.229 37.87 -20.898 1 56.61 ? O1B ADP 1301 C 1 
HETATM 3 O O2B ADP . . . K 3 70.22 36.955 -19.601 1 50.2 ? O2B ADP 1301 C 1 
HETATM 4 O O3B ADP . . . K 3 67.871 36.624 -18.72 1 45.25 ? O3B ADP 1301 C 1 
HETATM 5 P PA ADP . . . K 3 68.217 35.198 -22.227 1 58.81 ? PA ADP 1301 C 1 
HETATM 6 O O1A ADP . . . K 3 68.851 36.258 -23.099 1 62.34 ? O1A ADP 1301 C 1 
HETATM 7 O O2A ADP . . . K 3 66.715 35.013 -22.24 1 50.8 ? O2A ADP 1301 C 1 
HETATM 8 O O3A ADP . . . K 3 68.658 35.407 -20.687 1 74.3 ? O3A ADP 1301 C 1 
HETATM 9 O O5' ADP . . . K 3 68.933 33.792 -22.548 1 59.79 ? O5' ADP 1301 C 1 
HETATM 10 C C5' ADP . . . K 3 68.906 32.735 -21.589 1 59.2 ? C5' ADP 1301 C 1 
HETATM 11 C C4' ADP . . . K 3 69.528 31.464 -22.165 1 61.97 ? C4' ADP 1301 C 1 
HETATM 12 O O4' ADP . . . K 3 68.997 31.207 -23.463 1 58.68 ? O4' ADP 1301 C 1 
HETATM 13 C C3' ADP . . . K 3 71.038 31.556 -22.304 1 61.74 ? C3' ADP 1301 C 1 
HETATM 14 O O3' ADP . . . K 3 71.624 30.4 -21.705 1 64.66 ? O3' ADP 1301 C 1 
HETATM 15 C C2' ADP . . . K 3 71.319 31.556 -23.79 1 51.62 ? C2' ADP 1301 C 1 
HETATM 16 O O2' ADP . . . K 3 72.432 30.718 -24.099 1 60.24 ? O2' ADP 1301 C 1 
HETATM 17 C C1' ADP . . . K 3 70.047 31.017 -24.413 1 53.66 ? C1' ADP 1301 C 1 
HETATM 18 N N9 ADP . . . K 3 69.691 31.728 -25.664 1 56.3 ? N9 ADP 1301 C 1 
HETATM 19 C C8 ADP . . . K 3 69.212 32.983 -25.739 1 59.2 ? C8 ADP 1301 C 1 
HETATM 20 N N7 ADP . . . K 3 68.973 33.338 -27.026 1 54.23 ? N7 ADP 1301 C 1 
HETATM 21 C C5 ADP . . . K 3 69.3 32.291 -27.803 1 54.23 ? C5 ADP 1301 C 1 
HETATM 22 C C6 ADP . . . K 3 69.292 31.996 -29.254 1 55.34 ? C6 ADP 1301 C 1 
HETATM 23 N N6 ADP . . . K 3 68.872 32.925 -30.149 1 50.72 ? N6 ADP 1301 C 1 
HETATM 24 N N1 ADP . . . K 3 69.717 30.77 -29.643 1 54.04 ? N1 ADP 1301 C 1 
HETATM 25 C C2 ADP . . . K 3 70.136 29.846 -28.762 1 50.48 ? C2 ADP 1301 C 1 
HETATM 26 N N3 ADP . . . K 3 70.171 30.044 -27.434 1 52.37 ? N3 ADP 1301 C 1 
HETATM 27 C C4 ADP . . . K 3 69.776 31.228 -26.901 1 56.07 ? C4 ADP 1301 C 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           782 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           27 
#