data_4HMN # _model_server_result.job_id qecLtj8SsqSo8izCr38kGg _model_server_result.datetime_utc '2024-11-14 04:54:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hmn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4HMN # _exptl.entry_id 4HMN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HMN _cell.length_a 57.956 _cell.length_b 64.068 _cell.length_c 96.404 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 126 n n C1 C2 EDO sing 127 n n C1 H11 EDO sing 128 n n C1 H12 EDO sing 129 n n O1 HO1 EDO sing 130 n n C2 O2 EDO sing 131 n n C2 H21 EDO sing 132 n n C2 H22 EDO sing 133 n n O2 HO2 EDO sing 134 n n # _atom_sites.entry_id 4HMN _atom_sites.fract_transf_matrix[1][1] 0.017254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015608 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 401 700 NAP NAP . C 3 16J A 1 402 1 16J DRG . D 4 EDO A 1 403 1 EDO EDO . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 2 HOH HOH . E 5 HOH A 3 503 3 HOH HOH . E 5 HOH A 4 504 5 HOH HOH . E 5 HOH A 5 505 6 HOH HOH . E 5 HOH A 6 506 7 HOH HOH . E 5 HOH A 7 507 8 HOH HOH . E 5 HOH A 8 508 9 HOH HOH . E 5 HOH A 9 509 10 HOH HOH . E 5 HOH A 10 510 11 HOH HOH . E 5 HOH A 11 511 12 HOH HOH . E 5 HOH A 12 512 13 HOH HOH . E 5 HOH A 13 513 14 HOH HOH . E 5 HOH A 14 514 15 HOH HOH . E 5 HOH A 15 515 16 HOH HOH . E 5 HOH A 16 516 18 HOH HOH . E 5 HOH A 17 517 19 HOH HOH . E 5 HOH A 18 518 20 HOH HOH . E 5 HOH A 19 519 21 HOH HOH . E 5 HOH A 20 520 22 HOH HOH . E 5 HOH A 21 521 23 HOH HOH . E 5 HOH A 22 522 24 HOH HOH . E 5 HOH A 23 523 25 HOH HOH . E 5 HOH A 24 524 26 HOH HOH . E 5 HOH A 25 525 27 HOH HOH . E 5 HOH A 26 526 28 HOH HOH . E 5 HOH A 27 527 29 HOH HOH . E 5 HOH A 28 528 30 HOH HOH . E 5 HOH A 29 529 31 HOH HOH . E 5 HOH A 30 530 32 HOH HOH . E 5 HOH A 31 531 33 HOH HOH . E 5 HOH A 32 532 34 HOH HOH . E 5 HOH A 33 533 36 HOH HOH . E 5 HOH A 34 534 37 HOH HOH . E 5 HOH A 35 535 38 HOH HOH . E 5 HOH A 36 536 39 HOH HOH . E 5 HOH A 37 537 40 HOH HOH . E 5 HOH A 38 538 41 HOH HOH . E 5 HOH A 39 539 42 HOH HOH . E 5 HOH A 40 540 43 HOH HOH . E 5 HOH A 41 541 44 HOH HOH . E 5 HOH A 42 542 45 HOH HOH . E 5 HOH A 43 543 46 HOH HOH . E 5 HOH A 44 544 47 HOH HOH . E 5 HOH A 45 545 48 HOH HOH . E 5 HOH A 46 546 49 HOH HOH . E 5 HOH A 47 547 51 HOH HOH . E 5 HOH A 48 548 52 HOH HOH . E 5 HOH A 49 549 53 HOH HOH . E 5 HOH A 50 550 54 HOH HOH . E 5 HOH A 51 551 55 HOH HOH . E 5 HOH A 52 552 57 HOH HOH . E 5 HOH A 53 553 58 HOH HOH . E 5 HOH A 54 554 60 HOH HOH . E 5 HOH A 55 555 61 HOH HOH . E 5 HOH A 56 556 64 HOH HOH . E 5 HOH A 57 557 65 HOH HOH . E 5 HOH A 58 558 66 HOH HOH . E 5 HOH A 59 559 67 HOH HOH . E 5 HOH A 60 560 69 HOH HOH . E 5 HOH A 61 561 70 HOH HOH . E 5 HOH A 62 562 71 HOH HOH . E 5 HOH A 63 563 72 HOH HOH . E 5 HOH A 64 564 73 HOH HOH . E 5 HOH A 65 565 74 HOH HOH . E 5 HOH A 66 566 75 HOH HOH . E 5 HOH A 67 567 76 HOH HOH . E 5 HOH A 68 568 77 HOH HOH . E 5 HOH A 69 569 78 HOH HOH . E 5 HOH A 70 570 79 HOH HOH . E 5 HOH A 71 571 80 HOH HOH . E 5 HOH A 72 572 81 HOH HOH . E 5 HOH A 73 573 82 HOH HOH . E 5 HOH A 74 574 83 HOH HOH . E 5 HOH A 75 575 84 HOH HOH . E 5 HOH A 76 576 85 HOH HOH . E 5 HOH A 77 577 86 HOH HOH . E 5 HOH A 78 578 87 HOH HOH . E 5 HOH A 79 579 88 HOH HOH . E 5 HOH A 80 580 90 HOH HOH . E 5 HOH A 81 581 91 HOH HOH . E 5 HOH A 82 582 92 HOH HOH . E 5 HOH A 83 583 93 HOH HOH . E 5 HOH A 84 584 94 HOH HOH . E 5 HOH A 85 585 96 HOH HOH . E 5 HOH A 86 586 97 HOH HOH . E 5 HOH A 87 587 98 HOH HOH . E 5 HOH A 88 588 99 HOH HOH . E 5 HOH A 89 589 100 HOH HOH . E 5 HOH A 90 590 101 HOH HOH . E 5 HOH A 91 591 102 HOH HOH . E 5 HOH A 92 592 103 HOH HOH . E 5 HOH A 93 593 104 HOH HOH . E 5 HOH A 94 594 105 HOH HOH . E 5 HOH A 95 595 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 18.203 0.562 2.839 1 31 ? C1 EDO 403 A 1 HETATM 2 O O1 EDO . . . D 4 17.892 1.965 3.023 1 28.81 ? O1 EDO 403 A 1 HETATM 3 C C2 EDO . . . D 4 16.949 -0.278 2.558 1 31.69 ? C2 EDO 403 A 1 HETATM 4 O O2 EDO . . . D 4 16.08 -0.374 3.713 1 32.63 ? O2 EDO 403 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #