data_4HNK
#
_model_server_result.job_id            04UV4ktZsaE-j1wH5wBZ4w 
_model_server_result.datetime_utc      '2024-10-18 15:30:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hnk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":301}' 
#
_entry.id    4HNK 
#
_exptl.entry_id    4HNK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.1 
_cell.angle_gamma         90 
_cell.entry_id            4HNK 
_cell.length_a            178.785 
_cell.length_b            105.853 
_cell.length_c            186.402 
_cell.Z_PDB               56 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HNK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA heptameric 7 author_and_software_defined_assembly 1 
PISA heptameric 7 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,O,Q,R,S,T,U,V,W 1 1 
H,I,J,K,L,M,N,P,X,Y,Z,AA,BA,CA,DA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 O N N 
? 2 P N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4HNK 
_atom_sites.fract_transf_matrix[1][1]    0.005593 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002987 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006082 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 2 GOL C 1 301 3968 GOL GOL . 
P 2 GOL I 1 301 3968 GOL GOL . 
Q 3 HOH A 1 301 1 HOH HOH . 
Q 3 HOH A 2 302 2 HOH HOH . 
Q 3 HOH A 3 303 37 HOH HOH . 
Q 3 HOH A 4 304 38 HOH HOH . 
Q 3 HOH A 5 305 39 HOH HOH . 
Q 3 HOH A 6 306 40 HOH HOH . 
Q 3 HOH A 7 307 41 HOH HOH . 
Q 3 HOH A 8 308 42 HOH HOH . 
Q 3 HOH A 9 309 43 HOH HOH . 
Q 3 HOH A 10 310 89 HOH HOH . 
R 3 HOH B 1 301 4 HOH HOH . 
R 3 HOH B 2 302 25 HOH HOH . 
R 3 HOH B 3 303 44 HOH HOH . 
R 3 HOH B 4 304 45 HOH HOH . 
R 3 HOH B 5 305 46 HOH HOH . 
R 3 HOH B 6 306 47 HOH HOH . 
R 3 HOH B 7 307 77 HOH HOH . 
R 3 HOH B 8 308 81 HOH HOH . 
S 3 HOH C 1 401 6 HOH HOH . 
S 3 HOH C 2 402 7 HOH HOH . 
S 3 HOH C 3 403 8 HOH HOH . 
S 3 HOH C 4 404 10 HOH HOH . 
S 3 HOH C 5 405 50 HOH HOH . 
S 3 HOH C 6 406 51 HOH HOH . 
S 3 HOH C 7 407 52 HOH HOH . 
S 3 HOH C 8 408 53 HOH HOH . 
S 3 HOH C 9 409 58 HOH HOH . 
S 3 HOH C 10 410 61 HOH HOH . 
S 3 HOH C 11 411 90 HOH HOH . 
T 3 HOH D 1 301 11 HOH HOH . 
T 3 HOH D 2 302 13 HOH HOH . 
U 3 HOH E 1 301 14 HOH HOH . 
U 3 HOH E 2 302 15 HOH HOH . 
U 3 HOH E 3 303 16 HOH HOH . 
U 3 HOH E 4 304 17 HOH HOH . 
U 3 HOH E 5 305 55 HOH HOH . 
U 3 HOH E 6 306 57 HOH HOH . 
V 3 HOH F 1 301 19 HOH HOH . 
V 3 HOH F 2 302 21 HOH HOH . 
V 3 HOH F 3 303 23 HOH HOH . 
V 3 HOH F 4 304 24 HOH HOH . 
V 3 HOH F 5 305 60 HOH HOH . 
V 3 HOH F 6 306 64 HOH HOH . 
V 3 HOH F 7 307 75 HOH HOH . 
W 3 HOH G 1 301 65 HOH HOH . 
W 3 HOH G 2 302 66 HOH HOH . 
W 3 HOH G 3 303 85 HOH HOH . 
X 3 HOH H 1 301 67 HOH HOH . 
X 3 HOH H 2 302 68 HOH HOH . 
X 3 HOH H 3 303 71 HOH HOH . 
X 3 HOH H 4 304 83 HOH HOH . 
X 3 HOH H 5 305 88 HOH HOH . 
X 3 HOH H 6 306 91 HOH HOH . 
Y 3 HOH I 1 401 59 HOH HOH . 
Y 3 HOH I 2 402 69 HOH HOH . 
Y 3 HOH I 3 403 79 HOH HOH . 
Z 3 HOH J 1 301 26 HOH HOH . 
Z 3 HOH J 2 302 70 HOH HOH . 
AA 3 HOH K 1 301 87 HOH HOH . 
BA 3 HOH L 1 301 30 HOH HOH . 
BA 3 HOH L 2 302 72 HOH HOH . 
BA 3 HOH L 3 303 73 HOH HOH . 
BA 3 HOH L 4 304 92 HOH HOH . 
CA 3 HOH M 1 301 32 HOH HOH . 
CA 3 HOH M 2 302 34 HOH HOH . 
CA 3 HOH M 3 303 35 HOH HOH . 
CA 3 HOH M 4 304 36 HOH HOH . 
CA 3 HOH M 5 305 76 HOH HOH . 
CA 3 HOH M 6 306 80 HOH HOH . 
DA 3 HOH N 1 301 27 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . P 2 31.236 15.777 -43.608 1 89.31 ? C1 GOL 301 I 1 
HETATM 2 O O1 GOL . . . P 2 31.154 15.239 -42.307 1 124.41 ? O1 GOL 301 I 1 
HETATM 3 C C2 GOL . . . P 2 30.857 17.253 -43.572 1 128.56 ? C2 GOL 301 I 1 
HETATM 4 O O2 GOL . . . P 2 31.17 17.787 -42.306 1 155.92 ? O2 GOL 301 I 1 
HETATM 5 C C3 GOL . . . P 2 31.634 18.003 -44.647 1 152.15 ? C3 GOL 301 I 1 
HETATM 6 O O3 GOL . . . P 2 32.395 19.028 -44.048 1 153.06 ? O3 GOL 301 I 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#