data_4HNT # _model_server_result.job_id eAuPppe4Ouwx_dWlR01kFA _model_server_result.datetime_utc '2024-11-18 06:29:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hnt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1203}' # _entry.id 4HNT # _exptl.entry_id 4HNT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.311 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.86 _cell.angle_gamma 90 _cell.entry_id 4HNT _cell.length_a 96.23 _cell.length_b 256.283 _cell.length_c 126.685 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HNT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 565 A ASP 572 1_555 F MN MN . A MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc2 A NZ LYS 735 A LYS 741 1_555 F MN MN . A MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc3 A NE2 HIS 764 A HIS 771 1_555 F MN MN . A MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc4 A NE2 HIS 766 A HIS 773 1_555 F MN MN . A MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc5 B OD1 ASP 565 B ASP 572 1_555 I MN MN . B MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc6 B NZ LYS 735 B LYS 741 1_555 I MN MN . B MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc7 B NE2 HIS 764 B HIS 771 1_555 I MN MN . B MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc8 B NE2 HIS 766 B HIS 773 1_555 I MN MN . B MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc9 C OD1 ASP 565 C ASP 572 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc10 C NZ LYS 735 C LYS 741 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc11 C NE2 HIS 764 C HIS 771 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc12 C NE2 HIS 766 C HIS 773 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc13 D OD1 ASP 565 D ASP 572 1_555 M MN MN . D MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc14 D NZ LYS 735 D LYS 741 1_555 M MN MN . D MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc15 D NE2 HIS 766 D HIS 773 1_555 M MN MN . D MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? # _chem_comp.formula 'C10 H16 N2 O2 S' _chem_comp.formula_weight 228.311 _chem_comp.id BTI _chem_comp.mon_nstd_flag . _chem_comp.name 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTI doub 163 n n C11 C10 BTI sing 164 n n C11 H11 BTI sing 165 n n C10 C9 BTI sing 166 n n C10 H102 BTI sing 167 n n C10 H103 BTI sing 168 n n C9 C8 BTI sing 169 n n C9 H92 BTI sing 170 n n C9 H93 BTI sing 171 n n C8 C7 BTI sing 172 n n C8 H82 BTI sing 173 n n C8 H83 BTI sing 174 n n C7 C2 BTI sing 175 n n C7 H72 BTI sing 176 n n C7 H73 BTI sing 177 n n C2 S1 BTI sing 178 n n C2 C4 BTI sing 179 n n C2 H2 BTI sing 180 n n S1 C6 BTI sing 181 n n C6 C5 BTI sing 182 n n C6 H62 BTI sing 183 n n C6 H63 BTI sing 184 n n C5 N3 BTI sing 185 n n C5 C4 BTI sing 186 n n C5 H5 BTI sing 187 n n N3 C3 BTI sing 188 n n N3 HN3 BTI sing 189 n n C3 O3 BTI doub 190 n n C3 N2 BTI sing 191 n n N2 C4 BTI sing 192 n n N2 HN2 BTI sing 193 n n C4 H4 BTI sing 194 n n # _atom_sites.entry_id 4HNT _atom_sites.fract_transf_matrix[1][1] 0.010392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003754 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008393 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ADP A 1 1201 2100 ADP ADP . F 3 MN A 1 1202 2002 MN MN . G 4 BTI A 1 1203 2000 BTI BNK . H 4 BTI B 1 1201 2000 BTI BNK . I 3 MN B 1 1202 2002 MN MN . J 3 MN C 1 1201 2002 MN MN . K 5 ATP C 1 1202 2100 ATP ATP . L 4 BTI D 1 1201 2000 BTI BNK . M 3 MN D 1 1202 2002 MN MN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTI . . . G 4 80.549 101.595 1.248 1 101.21 ? C11 BTI 1203 A 1 HETATM 2 O O11 BTI . . . G 4 80.723 102.801 1.459 1 103.76 ? O11 BTI 1203 A 1 HETATM 3 C C10 BTI . . . G 4 79.517 101.136 0.236 1 99.02 ? C10 BTI 1203 A 1 HETATM 4 C C9 BTI . . . G 4 79.967 99.857 -0.465 1 98.01 ? C9 BTI 1203 A 1 HETATM 5 C C8 BTI . . . G 4 79.619 99.871 -1.944 1 96.84 ? C8 BTI 1203 A 1 HETATM 6 C C7 BTI . . . G 4 80.763 100.479 -2.742 1 98.33 ? C7 BTI 1203 A 1 HETATM 7 C C2 BTI . . . G 4 80.239 100.997 -4.078 1 98.06 ? C2 BTI 1203 A 1 HETATM 8 S S1 BTI . . . G 4 80.782 99.968 -5.404 1 92.97 ? S1 BTI 1203 A 1 HETATM 9 C C6 BTI . . . G 4 80.568 101.244 -6.612 1 97.43 ? C6 BTI 1203 A 1 HETATM 10 C C5 BTI . . . G 4 80.488 102.617 -5.936 1 99.81 ? C5 BTI 1203 A 1 HETATM 11 N N3 BTI . . . G 4 81.709 103.336 -6.294 1 102.16 ? N3 BTI 1203 A 1 HETATM 12 C C3 BTI . . . G 4 82.612 103.237 -5.329 1 104.13 ? C3 BTI 1203 A 1 HETATM 13 O O3 BTI . . . G 4 83.868 103.678 -5.446 1 105.16 ? O3 BTI 1203 A 1 HETATM 14 N N2 BTI . . . G 4 82.092 102.642 -4.254 1 102.8 ? N2 BTI 1203 A 1 HETATM 15 C C4 BTI . . . G 4 80.644 102.434 -4.42 1 100.63 ? C4 BTI 1203 A 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 219 _model_server_stats.create_model_time_ms 279 _model_server_stats.query_time_ms 426 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 15 #