data_4HNV # _model_server_result.job_id itcdLmVeo0vcQdNRQelXSw _model_server_result.datetime_utc '2024-10-20 03:37:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hnv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1201}' # _entry.id 4HNV # _exptl.entry_id 4HNV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.311 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.33 _cell.angle_gamma 90 _cell.entry_id 4HNV _cell.length_a 96.434 _cell.length_b 256.742 _cell.length_c 127.045 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HNV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 L N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NZ LYS 735 A LYS 741 1_555 F MN MN . A MN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc2 B OD1 ASP 565 B ASP 572 1_555 I MN MN . B MN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? metalc ? metalc3 B NZ LYS 735 B LYS 741 1_555 I MN MN . B MN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc4 B NE2 HIS 764 B HIS 771 1_555 I MN MN . B MN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc5 B NE2 HIS 766 B HIS 773 1_555 I MN MN . B MN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc6 C OD1 ASP 565 C ASP 572 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc7 C NZ LYS 735 C LYS 741 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc8 C NE2 HIS 764 C HIS 771 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc9 C NE2 HIS 766 C HIS 773 1_555 J MN MN . C MN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? # _chem_comp.formula 'C10 H16 N2 O2 S' _chem_comp.formula_weight 228.311 _chem_comp.id BTI _chem_comp.mon_nstd_flag . _chem_comp.name 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTI doub 163 n n C11 C10 BTI sing 164 n n C11 H11 BTI sing 165 n n C10 C9 BTI sing 166 n n C10 H102 BTI sing 167 n n C10 H103 BTI sing 168 n n C9 C8 BTI sing 169 n n C9 H92 BTI sing 170 n n C9 H93 BTI sing 171 n n C8 C7 BTI sing 172 n n C8 H82 BTI sing 173 n n C8 H83 BTI sing 174 n n C7 C2 BTI sing 175 n n C7 H72 BTI sing 176 n n C7 H73 BTI sing 177 n n C2 S1 BTI sing 178 n n C2 C4 BTI sing 179 n n C2 H2 BTI sing 180 n n S1 C6 BTI sing 181 n n C6 C5 BTI sing 182 n n C6 H62 BTI sing 183 n n C6 H63 BTI sing 184 n n C5 N3 BTI sing 185 n n C5 C4 BTI sing 186 n n C5 H5 BTI sing 187 n n N3 C3 BTI sing 188 n n N3 HN3 BTI sing 189 n n C3 O3 BTI doub 190 n n C3 N2 BTI sing 191 n n N2 C4 BTI sing 192 n n N2 HN2 BTI sing 193 n n C4 H4 BTI sing 194 n n # _atom_sites.entry_id 4HNV _atom_sites.fract_transf_matrix[1][1] 0.01037 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003638 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ADP A 1 1201 2100 ADP ADP . F 3 MN A 1 1202 2002 MN MN . G 4 BTI B 1 1201 2000 BTI BNK . H 4 BTI B 1 1202 2000 BTI BNK . I 3 MN B 1 1203 2002 MN MN . J 3 MN C 1 1201 2002 MN MN . K 5 ATP C 1 1202 2100 ATP ATP . L 4 BTI C 1 1203 2000 BTI BNK . M 6 CL D 1 1201 2003 CL CL . N 4 BTI D 1 1202 2000 BTI BNK . O 3 MN D 1 1203 2002 MN MN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTI . . . G 4 82.672 109.418 41.283 1 60.09 ? C11 BTI 1201 B 1 HETATM 2 O O11 BTI . . . G 4 83.693 109.621 40.652 1 61.11 ? O11 BTI 1201 B 1 HETATM 3 C C10 BTI . . . G 4 81.824 110.56 41.784 1 59 ? C10 BTI 1201 B 1 HETATM 4 C C9 BTI . . . G 4 82.305 110.928 43.181 1 60.91 ? C9 BTI 1201 B 1 HETATM 5 C C8 BTI . . . G 4 81.805 109.96 44.255 1 59.2 ? C8 BTI 1201 B 1 HETATM 6 C C7 BTI . . . G 4 82.653 110.112 45.514 1 58.96 ? C7 BTI 1201 B 1 HETATM 7 C C2 BTI . . . G 4 82.121 109.186 46.599 1 59.93 ? C2 BTI 1201 B 1 HETATM 8 S S1 BTI . . . G 4 82.666 109.634 48.227 1 58.03 ? S1 BTI 1201 B 1 HETATM 9 C C6 BTI . . . G 4 82.453 107.978 48.816 1 56.02 ? C6 BTI 1201 B 1 HETATM 10 C C5 BTI . . . G 4 82.672 107.003 47.66 1 57.78 ? C5 BTI 1201 B 1 HETATM 11 N N3 BTI . . . G 4 84.077 106.63 47.682 1 59.81 ? N3 BTI 1201 B 1 HETATM 12 C C3 BTI . . . G 4 84.786 107.265 46.76 1 61.98 ? C3 BTI 1201 B 1 HETATM 13 O O3 BTI . . . G 4 86.129 107.327 46.718 1 64.24 ? O3 BTI 1201 B 1 HETATM 14 N N2 BTI . . . G 4 83.981 107.902 45.93 1 60.41 ? N2 BTI 1201 B 1 HETATM 15 C C4 BTI . . . G 4 82.587 107.766 46.335 1 59.5 ? C4 BTI 1201 B 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #