data_4HOO # _model_server_result.job_id k0YKhcBKP5FVyvafo9Aoxw _model_server_result.datetime_utc '2024-11-23 12:49:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hoo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 4HOO # _exptl.entry_id 4HOO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HOO _cell.length_a 73.119 _cell.length_b 73.119 _cell.length_c 136.028 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HOO _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 227 B CYS 238 1_555 B SG CYS 299 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? metalc ? metalc1 A NE2 HIS 181 A HIS 192 1_555 C NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc2 A OE2 GLU 183 A GLU 194 1_555 C NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? metalc ? metalc3 A NE2 HIS 233 A HIS 244 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc4 A NE2 HIS 269 A HIS 280 1_555 C NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc5 A SG CYS 299 A CYS 310 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc6 A SG CYS 301 A CYS 312 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc7 B NE2 HIS 181 B HIS 192 1_555 G NI NI . B NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc8 B OE2 GLU 183 B GLU 194 1_555 G NI NI . B NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc9 B SG CYS 227 B CYS 238 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc10 B NE2 HIS 233 B HIS 244 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc11 B NE2 HIS 269 B HIS 280 1_555 G NI NI . B NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc12 B SG CYS 299 B CYS 310 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc13 B SG CYS 301 B CYS 312 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc14 G NI NI . B NI 401 1_555 J O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4HOO _atom_sites.fract_transf_matrix[1][1] 0.013676 _atom_sites.fract_transf_matrix[1][2] 0.007896 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015792 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007351 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI A 1 401 1 NI NI . D 3 ZN A 1 402 1 ZN ZN . E 4 ACT A 1 403 1428 ACT ACT . F 4 ACT A 1 404 1428 ACT ACT . G 2 NI B 1 401 2 NI NI . H 3 ZN B 1 402 402 ZN ZN . I 5 HOH A 1 501 1 HOH HOH . I 5 HOH A 2 502 2 HOH HOH . I 5 HOH A 3 503 3 HOH HOH . I 5 HOH A 4 504 5 HOH HOH . I 5 HOH A 5 505 8 HOH HOH . I 5 HOH A 6 506 11 HOH HOH . I 5 HOH A 7 507 12 HOH HOH . I 5 HOH A 8 508 21 HOH HOH . I 5 HOH A 9 509 29 HOH HOH . I 5 HOH A 10 510 36 HOH HOH . I 5 HOH A 11 511 41 HOH HOH . I 5 HOH A 12 512 43 HOH HOH . I 5 HOH A 13 513 44 HOH HOH . I 5 HOH A 14 514 54 HOH HOH . I 5 HOH A 15 515 80 HOH HOH . I 5 HOH A 16 516 87 HOH HOH . I 5 HOH A 17 517 1 HOH HOH . I 5 HOH A 18 518 4 HOH HOH . I 5 HOH A 19 519 6 HOH HOH . I 5 HOH A 20 520 9 HOH HOH . I 5 HOH A 21 521 13 HOH HOH . I 5 HOH A 22 522 22 HOH HOH . I 5 HOH A 23 523 23 HOH HOH . I 5 HOH A 24 524 25 HOH HOH . I 5 HOH A 25 525 27 HOH HOH . I 5 HOH A 26 526 29 HOH HOH . I 5 HOH A 27 527 30 HOH HOH . I 5 HOH A 28 528 31 HOH HOH . I 5 HOH A 29 529 32 HOH HOH . I 5 HOH A 30 530 34 HOH HOH . I 5 HOH A 31 531 36 HOH HOH . I 5 HOH A 32 532 38 HOH HOH . I 5 HOH A 33 533 39 HOH HOH . I 5 HOH A 34 534 40 HOH HOH . I 5 HOH A 35 535 42 HOH HOH . I 5 HOH A 36 536 45 HOH HOH . I 5 HOH A 37 537 46 HOH HOH . I 5 HOH A 38 538 47 HOH HOH . I 5 HOH A 39 539 48 HOH HOH . I 5 HOH A 40 540 50 HOH HOH . I 5 HOH A 41 541 51 HOH HOH . I 5 HOH A 42 542 54 HOH HOH . I 5 HOH A 43 543 55 HOH HOH . I 5 HOH A 44 544 60 HOH HOH . I 5 HOH A 45 545 63 HOH HOH . I 5 HOH A 46 546 64 HOH HOH . I 5 HOH A 47 547 65 HOH HOH . I 5 HOH A 48 548 66 HOH HOH . I 5 HOH A 49 549 67 HOH HOH . I 5 HOH A 50 550 72 HOH HOH . I 5 HOH A 51 551 73 HOH HOH . I 5 HOH A 52 552 74 HOH HOH . I 5 HOH A 53 553 75 HOH HOH . I 5 HOH A 54 554 76 HOH HOH . I 5 HOH A 55 555 77 HOH HOH . I 5 HOH A 56 556 79 HOH HOH . I 5 HOH A 57 557 83 HOH HOH . I 5 HOH A 58 558 84 HOH HOH . I 5 HOH A 59 559 88 HOH HOH . I 5 HOH A 60 560 90 HOH HOH . I 5 HOH A 61 561 93 HOH HOH . I 5 HOH A 62 562 94 HOH HOH . I 5 HOH A 63 563 95 HOH HOH . I 5 HOH A 64 564 98 HOH HOH . I 5 HOH A 65 565 102 HOH HOH . I 5 HOH A 66 566 105 HOH HOH . I 5 HOH A 67 567 108 HOH HOH . I 5 HOH A 68 568 115 HOH HOH . I 5 HOH A 69 569 116 HOH HOH . I 5 HOH A 70 570 119 HOH HOH . I 5 HOH A 71 571 120 HOH HOH . I 5 HOH A 72 572 123 HOH HOH . I 5 HOH A 73 573 124 HOH HOH . J 5 HOH B 1 501 10 HOH HOH . J 5 HOH B 2 502 13 HOH HOH . J 5 HOH B 3 503 15 HOH HOH . J 5 HOH B 4 504 20 HOH HOH . J 5 HOH B 5 505 23 HOH HOH . J 5 HOH B 6 506 25 HOH HOH . J 5 HOH B 7 507 37 HOH HOH . J 5 HOH B 8 508 39 HOH HOH . J 5 HOH B 9 509 50 HOH HOH . J 5 HOH B 10 510 57 HOH HOH . J 5 HOH B 11 511 73 HOH HOH . J 5 HOH B 12 512 79 HOH HOH . J 5 HOH B 13 513 85 HOH HOH . J 5 HOH B 14 514 102 HOH HOH . J 5 HOH B 15 515 2 HOH HOH . J 5 HOH B 16 516 5 HOH HOH . J 5 HOH B 17 517 7 HOH HOH . J 5 HOH B 18 518 10 HOH HOH . J 5 HOH B 19 519 11 HOH HOH . J 5 HOH B 20 520 12 HOH HOH . J 5 HOH B 21 521 14 HOH HOH . J 5 HOH B 22 522 15 HOH HOH . J 5 HOH B 23 523 16 HOH HOH . J 5 HOH B 24 524 17 HOH HOH . J 5 HOH B 25 525 18 HOH HOH . J 5 HOH B 26 526 19 HOH HOH . J 5 HOH B 27 527 20 HOH HOH . J 5 HOH B 28 528 21 HOH HOH . J 5 HOH B 29 529 24 HOH HOH . J 5 HOH B 30 530 26 HOH HOH . J 5 HOH B 31 531 28 HOH HOH . J 5 HOH B 32 532 33 HOH HOH . J 5 HOH B 33 533 35 HOH HOH . J 5 HOH B 34 534 37 HOH HOH . J 5 HOH B 35 535 41 HOH HOH . J 5 HOH B 36 536 43 HOH HOH . J 5 HOH B 37 537 44 HOH HOH . J 5 HOH B 38 538 49 HOH HOH . J 5 HOH B 39 539 52 HOH HOH . J 5 HOH B 40 540 53 HOH HOH . J 5 HOH B 41 541 56 HOH HOH . J 5 HOH B 42 542 57 HOH HOH . J 5 HOH B 43 543 58 HOH HOH . J 5 HOH B 44 544 59 HOH HOH . J 5 HOH B 45 545 61 HOH HOH . J 5 HOH B 46 546 62 HOH HOH . J 5 HOH B 47 547 68 HOH HOH . J 5 HOH B 48 548 69 HOH HOH . J 5 HOH B 49 549 70 HOH HOH . J 5 HOH B 50 550 71 HOH HOH . J 5 HOH B 51 551 78 HOH HOH . J 5 HOH B 52 552 80 HOH HOH . J 5 HOH B 53 553 81 HOH HOH . J 5 HOH B 54 554 82 HOH HOH . J 5 HOH B 55 555 85 HOH HOH . J 5 HOH B 56 556 86 HOH HOH . J 5 HOH B 57 557 87 HOH HOH . J 5 HOH B 58 558 89 HOH HOH . J 5 HOH B 59 559 91 HOH HOH . J 5 HOH B 60 560 92 HOH HOH . J 5 HOH B 61 561 96 HOH HOH . J 5 HOH B 62 562 97 HOH HOH . J 5 HOH B 63 563 99 HOH HOH . J 5 HOH B 64 564 101 HOH HOH . J 5 HOH B 65 565 103 HOH HOH . J 5 HOH B 66 566 104 HOH HOH . J 5 HOH B 67 567 106 HOH HOH . J 5 HOH B 68 568 107 HOH HOH . J 5 HOH B 69 569 109 HOH HOH . J 5 HOH B 70 570 110 HOH HOH . J 5 HOH B 71 571 111 HOH HOH . J 5 HOH B 72 572 112 HOH HOH . J 5 HOH B 73 573 113 HOH HOH . J 5 HOH B 74 574 114 HOH HOH . J 5 HOH B 75 575 117 HOH HOH . J 5 HOH B 76 576 118 HOH HOH . J 5 HOH B 77 577 121 HOH HOH . J 5 HOH B 78 578 122 HOH HOH . J 5 HOH B 79 579 125 HOH HOH . J 5 HOH B 80 580 126 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.825 _atom_site.Cartn_y 17.028 _atom_site.Cartn_z 48.094 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #