data_4HVQ # _model_server_result.job_id 4VTRmQ5rGABgUDeHNmuwjw _model_server_result.datetime_utc '2024-10-10 18:20:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4HVQ # _exptl.entry_id 4HVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HVQ _cell.length_a 57.699 _cell.length_b 57.699 _cell.length_c 232.011 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 28.8495 49.9688 38.6685 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 51 A HIS 51 1_555 B FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc2 A OE2 GLU 57 A GLU 57 1_555 B FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc3 A NE2 HIS 95 A HIS 95 1_555 B FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc4 B FE FE2 . A FE2 201 1_555 D O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc5 B FE FE2 . A FE2 201 1_555 D O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 4HVQ _atom_sites.fract_transf_matrix[1][1] 0.017331 _atom_sites.fract_transf_matrix[1][2] 0.010006 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00431 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 A 1 201 300 FE2 FE . C 3 TRS A 1 202 400 TRS TRS . D 4 HOH A 1 301 403 HOH HOH . D 4 HOH A 2 302 405 HOH HOH . D 4 HOH A 3 303 410 HOH HOH . D 4 HOH A 4 304 412 HOH HOH . D 4 HOH A 5 305 415 HOH HOH . D 4 HOH A 6 306 418 HOH HOH . D 4 HOH A 7 307 431 HOH HOH . D 4 HOH A 8 308 436 HOH HOH . D 4 HOH A 9 309 438 HOH HOH . D 4 HOH A 10 310 441 HOH HOH . D 4 HOH A 11 311 444 HOH HOH . D 4 HOH A 12 312 445 HOH HOH . D 4 HOH A 13 313 447 HOH HOH . D 4 HOH A 14 314 450 HOH HOH . D 4 HOH A 15 315 459 HOH HOH . D 4 HOH A 16 316 468 HOH HOH . D 4 HOH A 17 317 472 HOH HOH . D 4 HOH A 18 318 474 HOH HOH . D 4 HOH A 19 319 476 HOH HOH . D 4 HOH A 20 320 477 HOH HOH . D 4 HOH A 21 321 489 HOH HOH . D 4 HOH A 22 322 495 HOH HOH . D 4 HOH A 23 323 496 HOH HOH . D 4 HOH A 24 324 500 HOH HOH . D 4 HOH A 25 325 516 HOH HOH . D 4 HOH A 26 326 524 HOH HOH . D 4 HOH A 27 327 527 HOH HOH . D 4 HOH A 28 328 540 HOH HOH . D 4 HOH A 29 329 542 HOH HOH . D 4 HOH A 30 330 546 HOH HOH . D 4 HOH A 31 331 1 HOH HOH . D 4 HOH A 32 332 2 HOH HOH . D 4 HOH A 33 333 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 18.056 8.477 -9.736 1 212.57 ? C TRS 202 A 1 HETATM 2 C C1 TRS . . . C 3 19.465 8.727 -9.117 1 207.78 ? C1 TRS 202 A 1 HETATM 3 C C2 TRS . . . C 3 17.73 8.895 -11.179 1 206.18 ? C2 TRS 202 A 1 HETATM 4 C C3 TRS . . . C 3 16.902 8.106 -8.794 1 208.89 ? C3 TRS 202 A 1 HETATM 5 N N TRS . . . C 3 17.691 9.897 -9.406 1 214.18 ? N TRS 202 A 1 HETATM 6 O O1 TRS . . . C 3 20.045 10.023 -9.413 1 207.17 ? O1 TRS 202 A 1 HETATM 7 O O2 TRS . . . C 3 16.369 8.538 -11.512 1 185.57 ? O2 TRS 202 A 1 HETATM 8 O O3 TRS . . . C 3 16.676 6.658 -8.871 1 212.45 ? O3 TRS 202 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #