data_4HVS # _model_server_result.job_id 4ed9bVIuEwF8DqDz21AjvA _model_server_result.datetime_utc '2024-11-22 04:18:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hvs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 4HVS # _exptl.entry_id 4HVS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 382.382 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(1H-pyrrolo[2,3-b]pyridin-3-ylmethyl)-N-[4-(trifluoromethyl)benzyl]pyridin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.81 _cell.angle_gamma 90 _cell.entry_id 4HVS _cell.length_a 110.735 _cell.length_b 81.863 _cell.length_c 50.055 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HVS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H17 F3 N4' _chem_comp.formula_weight 382.382 _chem_comp.id 647 _chem_comp.mon_nstd_flag . _chem_comp.name 5-(1H-pyrrolo[2,3-b]pyridin-3-ylmethyl)-N-[4-(trifluoromethyl)benzyl]pyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C38 647 doub 1 n y C40 C32 647 sing 2 n y C29 N27 647 sing 3 n n C29 C32 647 sing 4 n n C38 C37 647 sing 5 n y N27 C22 647 sing 6 n n N21 C22 647 doub 7 n y N21 C19 647 sing 8 n y C32 C33 647 doub 9 n y C22 C23 647 sing 10 n y C19 C18 647 doub 11 n y C18 C25 647 sing 12 n y C18 C15 647 sing 13 n n C23 C25 647 doub 14 n y F45 C42 647 sing 15 n n C15 C12 647 sing 16 n n C37 C42 647 sing 17 n n C37 C35 647 doub 18 n y C33 C35 647 sing 19 n y C42 F44 647 sing 20 n n C42 F43 647 sing 21 n n C12 C13 647 sing 22 n y C12 C10 647 doub 23 n y C6 C13 647 doub 24 n y C6 C1 647 sing 25 n y C13 C14 647 sing 26 n y C10 N8 647 sing 27 n y C1 C3 647 doub 28 n y C14 N8 647 sing 29 n y C14 N5 647 doub 30 n y C3 N5 647 sing 31 n y C1 H1 647 sing 32 n n C3 H2 647 sing 33 n n C6 H3 647 sing 34 n n N8 H4 647 sing 35 n n C10 H5 647 sing 36 n n C15 H6 647 sing 37 n n C15 H7 647 sing 38 n n C19 H8 647 sing 39 n n C23 H9 647 sing 40 n n C25 H10 647 sing 41 n n N27 H11 647 sing 42 n n C29 H12 647 sing 43 n n C29 H13 647 sing 44 n n C33 H14 647 sing 45 n n C35 H15 647 sing 46 n n C38 H16 647 sing 47 n n C40 H17 647 sing 48 n n # _atom_sites.entry_id 4HVS _atom_sites.fract_transf_matrix[1][1] 0.009031 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002901 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012216 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020984 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 647 A 1 1001 1 647 647 . C 3 HOH A 1 1101 1 HOH HOH . C 3 HOH A 2 1102 2 HOH HOH . C 3 HOH A 3 1103 3 HOH HOH . C 3 HOH A 4 1104 4 HOH HOH . C 3 HOH A 5 1105 5 HOH HOH . C 3 HOH A 6 1106 6 HOH HOH . C 3 HOH A 7 1107 7 HOH HOH . C 3 HOH A 8 1108 8 HOH HOH . C 3 HOH A 9 1109 9 HOH HOH . C 3 HOH A 10 1110 10 HOH HOH . C 3 HOH A 11 1111 11 HOH HOH . C 3 HOH A 12 1112 12 HOH HOH . C 3 HOH A 13 1113 13 HOH HOH . C 3 HOH A 14 1114 14 HOH HOH . C 3 HOH A 15 1115 15 HOH HOH . C 3 HOH A 16 1116 16 HOH HOH . C 3 HOH A 17 1117 17 HOH HOH . C 3 HOH A 18 1118 18 HOH HOH . C 3 HOH A 19 1119 19 HOH HOH . C 3 HOH A 20 1120 20 HOH HOH . C 3 HOH A 21 1121 21 HOH HOH . C 3 HOH A 22 1122 22 HOH HOH . C 3 HOH A 23 1123 23 HOH HOH . C 3 HOH A 24 1124 24 HOH HOH . C 3 HOH A 25 1125 25 HOH HOH . C 3 HOH A 26 1126 26 HOH HOH . C 3 HOH A 27 1127 27 HOH HOH . C 3 HOH A 28 1128 28 HOH HOH . C 3 HOH A 29 1129 29 HOH HOH . C 3 HOH A 30 1130 30 HOH HOH . C 3 HOH A 31 1131 31 HOH HOH . C 3 HOH A 32 1132 32 HOH HOH . C 3 HOH A 33 1133 33 HOH HOH . C 3 HOH A 34 1134 34 HOH HOH . C 3 HOH A 35 1135 35 HOH HOH . C 3 HOH A 36 1136 36 HOH HOH . C 3 HOH A 37 1137 37 HOH HOH . C 3 HOH A 38 1138 38 HOH HOH . C 3 HOH A 39 1139 39 HOH HOH . C 3 HOH A 40 1140 40 HOH HOH . C 3 HOH A 41 1141 41 HOH HOH . C 3 HOH A 42 1142 42 HOH HOH . C 3 HOH A 43 1143 43 HOH HOH . C 3 HOH A 44 1144 44 HOH HOH . C 3 HOH A 45 1145 45 HOH HOH . C 3 HOH A 46 1146 46 HOH HOH . C 3 HOH A 47 1147 47 HOH HOH . C 3 HOH A 48 1148 48 HOH HOH . C 3 HOH A 49 1149 49 HOH HOH . C 3 HOH A 50 1150 50 HOH HOH . C 3 HOH A 51 1151 51 HOH HOH . C 3 HOH A 52 1152 52 HOH HOH . C 3 HOH A 53 1153 53 HOH HOH . C 3 HOH A 54 1154 54 HOH HOH . C 3 HOH A 55 1155 55 HOH HOH . C 3 HOH A 56 1156 56 HOH HOH . C 3 HOH A 57 1157 57 HOH HOH . C 3 HOH A 58 1158 58 HOH HOH . C 3 HOH A 59 1159 59 HOH HOH . C 3 HOH A 60 1160 60 HOH HOH . C 3 HOH A 61 1161 61 HOH HOH . C 3 HOH A 62 1162 62 HOH HOH . C 3 HOH A 63 1163 63 HOH HOH . C 3 HOH A 64 1164 64 HOH HOH . C 3 HOH A 65 1165 65 HOH HOH . C 3 HOH A 66 1166 66 HOH HOH . C 3 HOH A 67 1167 1167 HOH HOH . C 3 HOH A 68 1168 68 HOH HOH . C 3 HOH A 69 1169 69 HOH HOH . C 3 HOH A 70 1170 70 HOH HOH . C 3 HOH A 71 1171 71 HOH HOH . C 3 HOH A 72 1172 72 HOH HOH . C 3 HOH A 73 1173 73 HOH HOH . C 3 HOH A 74 1174 74 HOH HOH . C 3 HOH A 75 1175 75 HOH HOH . C 3 HOH A 76 1176 76 HOH HOH . C 3 HOH A 77 1177 77 HOH HOH . C 3 HOH A 78 1178 78 HOH HOH . C 3 HOH A 79 1179 79 HOH HOH . C 3 HOH A 80 1180 80 HOH HOH . C 3 HOH A 81 1181 81 HOH HOH . C 3 HOH A 82 1182 82 HOH HOH . C 3 HOH A 83 1183 83 HOH HOH . C 3 HOH A 84 1184 84 HOH HOH . C 3 HOH A 85 1185 85 HOH HOH . C 3 HOH A 86 1186 86 HOH HOH . C 3 HOH A 87 1187 87 HOH HOH . C 3 HOH A 88 1188 88 HOH HOH . C 3 HOH A 89 1189 89 HOH HOH . C 3 HOH A 90 1190 90 HOH HOH . C 3 HOH A 91 1191 91 HOH HOH . C 3 HOH A 92 1192 92 HOH HOH . C 3 HOH A 93 1193 93 HOH HOH . C 3 HOH A 94 1194 94 HOH HOH . C 3 HOH A 95 1195 95 HOH HOH . C 3 HOH A 96 1196 96 HOH HOH . C 3 HOH A 97 1197 97 HOH HOH . C 3 HOH A 98 1198 98 HOH HOH . C 3 HOH A 99 1199 99 HOH HOH . C 3 HOH A 100 1200 100 HOH HOH . C 3 HOH A 101 1201 101 HOH HOH . C 3 HOH A 102 1202 102 HOH HOH . C 3 HOH A 103 1203 103 HOH HOH . C 3 HOH A 104 1204 104 HOH HOH . C 3 HOH A 105 1205 105 HOH HOH . C 3 HOH A 106 1206 106 HOH HOH . C 3 HOH A 107 1207 107 HOH HOH . C 3 HOH A 108 1208 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 647 . . . B 2 12.741 3.149 11.234 1 25.33 ? C1 647 1001 A 1 HETATM 2 C C3 647 . . . B 2 12.8 2.781 12.579 1 22.52 ? C3 647 1001 A 1 HETATM 3 N N5 647 . . . B 2 13.091 1.524 13.033 1 25.29 ? N5 647 1001 A 1 HETATM 4 C C6 647 . . . B 2 13.022 2.174 10.249 1 24.69 ? C6 647 1001 A 1 HETATM 5 N N8 647 . . . B 2 13.675 -0.685 12.251 1 24.02 ? N8 647 1001 A 1 HETATM 6 C C10 647 . . . B 2 13.867 -1.311 11.034 1 22.59 ? C10 647 1001 A 1 HETATM 7 C C12 647 . . . B 2 13.69 -0.384 10.007 1 20.65 ? C12 647 1001 A 1 HETATM 8 C C13 647 . . . B 2 13.345 0.864 10.671 1 24.28 ? C13 647 1001 A 1 HETATM 9 C C14 647 . . . B 2 13.346 0.63 12.05 1 22.05 ? C14 647 1001 A 1 HETATM 10 C C15 647 . . . B 2 13.801 -0.609 8.521 1 20.41 ? C15 647 1001 A 1 HETATM 11 C C18 647 . . . B 2 14.334 -1.985 8.208 1 20.85 ? C18 647 1001 A 1 HETATM 12 C C19 647 . . . B 2 15.59 -2.177 7.645 1 21.52 ? C19 647 1001 A 1 HETATM 13 N N21 647 . . . B 2 16.104 -3.406 7.356 1 20 ? N21 647 1001 A 1 HETATM 14 C C22 647 . . . B 2 15.337 -4.515 7.631 1 19.92 ? C22 647 1001 A 1 HETATM 15 C C23 647 . . . B 2 14.089 -4.407 8.212 1 19.64 ? C23 647 1001 A 1 HETATM 16 C C25 647 . . . B 2 13.594 -3.146 8.487 1 21.8 ? C25 647 1001 A 1 HETATM 17 N N27 647 . . . B 2 15.921 -5.734 7.351 1 21.57 ? N27 647 1001 A 1 HETATM 18 C C29 647 . . . B 2 17.198 -5.713 6.683 1 24.52 ? C29 647 1001 A 1 HETATM 19 C C32 647 . . . B 2 18.472 -5.924 7.413 1 23.32 ? C32 647 1001 A 1 HETATM 20 C C33 647 . . . B 2 18.551 -6.168 8.791 1 23.31 ? C33 647 1001 A 1 HETATM 21 C C35 647 . . . B 2 19.814 -6.333 9.375 1 22.99 ? C35 647 1001 A 1 HETATM 22 C C37 647 . . . B 2 20.96 -6.255 8.574 1 20.87 ? C37 647 1001 A 1 HETATM 23 C C38 647 . . . B 2 20.879 -5.993 7.195 1 23.03 ? C38 647 1001 A 1 HETATM 24 C C40 647 . . . B 2 19.619 -5.838 6.629 1 20.69 ? C40 647 1001 A 1 HETATM 25 C C42 647 . . . B 2 22.302 -6.464 9.173 1 22.14 ? C42 647 1001 A 1 HETATM 26 F F43 647 . . . B 2 22.809 -5.48 9.949 1 24.99 ? F43 647 1001 A 1 HETATM 27 F F44 647 . . . B 2 22.264 -7.573 9.928 1 25.03 ? F44 647 1001 A 1 HETATM 28 F F45 647 . . . B 2 23.252 -6.687 8.258 1 26.05 ? F45 647 1001 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #