data_4HVY # _model_server_result.job_id tKPS3veKYuvxR-c9v5rjRg _model_server_result.datetime_utc '2024-10-19 00:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hvy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 4HVY # _exptl.entry_id 4HVY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HVY _cell.length_a 90.2 _cell.length_b 90.2 _cell.length_c 75.03 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HVY _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 24 A ALA 48 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc2 A O LEU 34 A LEU 58 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? metalc ? metalc3 A OE1 GLN 65 A GLN 89 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc4 C MG MG . A MG 202 1_555 L O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc5 F NA NA . A NA 205 1_555 L O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? metalc ? metalc6 F NA NA . A NA 205 1_555 L O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4HVY _atom_sites.fract_transf_matrix[1][1] 0.011086 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011086 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013328 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 79 GOL GOL . C 3 MG A 1 202 80 MG MG . D 3 MG A 1 203 81 MG MG . E 4 SO4 A 1 204 82 SO4 SO4 . F 5 NA A 1 205 326 NA NA . G 3 MG A 1 206 327 MG MG . H 5 NA A 1 207 328 NA NA . I 5 NA A 1 208 329 NA NA . J 5 NA A 1 209 330 NA NA . K 2 GOL A 1 210 331 GOL GOL . L 6 HOH A 1 301 1 HOH HOH . L 6 HOH A 2 302 2 HOH HOH . L 6 HOH A 3 303 3 HOH HOH . L 6 HOH A 4 304 4 HOH HOH . L 6 HOH A 5 305 5 HOH HOH . L 6 HOH A 6 306 6 HOH HOH . L 6 HOH A 7 307 7 HOH HOH . L 6 HOH A 8 308 9 HOH HOH . L 6 HOH A 9 309 10 HOH HOH . L 6 HOH A 10 310 11 HOH HOH . L 6 HOH A 11 311 12 HOH HOH . L 6 HOH A 12 312 13 HOH HOH . L 6 HOH A 13 313 14 HOH HOH . L 6 HOH A 14 314 15 HOH HOH . L 6 HOH A 15 315 16 HOH HOH . L 6 HOH A 16 316 17 HOH HOH . L 6 HOH A 17 317 18 HOH HOH . L 6 HOH A 18 318 19 HOH HOH . L 6 HOH A 19 319 22 HOH HOH . L 6 HOH A 20 320 23 HOH HOH . L 6 HOH A 21 321 24 HOH HOH . L 6 HOH A 22 322 25 HOH HOH . L 6 HOH A 23 323 26 HOH HOH . L 6 HOH A 24 324 27 HOH HOH . L 6 HOH A 25 325 28 HOH HOH . L 6 HOH A 26 326 29 HOH HOH . L 6 HOH A 27 327 30 HOH HOH . L 6 HOH A 28 328 31 HOH HOH . L 6 HOH A 29 329 32 HOH HOH . L 6 HOH A 30 330 33 HOH HOH . L 6 HOH A 31 331 37 HOH HOH . L 6 HOH A 32 332 38 HOH HOH . L 6 HOH A 33 333 40 HOH HOH . L 6 HOH A 34 334 46 HOH HOH . L 6 HOH A 35 335 47 HOH HOH . L 6 HOH A 36 336 49 HOH HOH . L 6 HOH A 37 337 51 HOH HOH . L 6 HOH A 38 338 52 HOH HOH . L 6 HOH A 39 339 54 HOH HOH . L 6 HOH A 40 340 56 HOH HOH . L 6 HOH A 41 341 57 HOH HOH . L 6 HOH A 42 342 58 HOH HOH . L 6 HOH A 43 343 59 HOH HOH . L 6 HOH A 44 344 61 HOH HOH . L 6 HOH A 45 345 62 HOH HOH . L 6 HOH A 46 346 64 HOH HOH . L 6 HOH A 47 347 67 HOH HOH . L 6 HOH A 48 348 69 HOH HOH . L 6 HOH A 49 349 71 HOH HOH . L 6 HOH A 50 350 83 HOH HOH . L 6 HOH A 51 351 84 HOH HOH . L 6 HOH A 52 352 92 HOH HOH . L 6 HOH A 53 353 94 HOH HOH . L 6 HOH A 54 354 98 HOH HOH . L 6 HOH A 55 355 102 HOH HOH . L 6 HOH A 56 356 103 HOH HOH . L 6 HOH A 57 357 110 HOH HOH . L 6 HOH A 58 358 119 HOH HOH . L 6 HOH A 59 359 120 HOH HOH . L 6 HOH A 60 360 122 HOH HOH . L 6 HOH A 61 361 124 HOH HOH . L 6 HOH A 62 362 125 HOH HOH . L 6 HOH A 63 363 130 HOH HOH . L 6 HOH A 64 364 131 HOH HOH . L 6 HOH A 65 365 132 HOH HOH . L 6 HOH A 66 366 134 HOH HOH . L 6 HOH A 67 367 135 HOH HOH . L 6 HOH A 68 368 137 HOH HOH . L 6 HOH A 69 369 138 HOH HOH . L 6 HOH A 70 370 140 HOH HOH . L 6 HOH A 71 371 142 HOH HOH . L 6 HOH A 72 372 147 HOH HOH . L 6 HOH A 73 373 149 HOH HOH . L 6 HOH A 74 374 150 HOH HOH . L 6 HOH A 75 375 151 HOH HOH . L 6 HOH A 76 376 153 HOH HOH . L 6 HOH A 77 377 155 HOH HOH . L 6 HOH A 78 378 156 HOH HOH . L 6 HOH A 79 379 158 HOH HOH . L 6 HOH A 80 380 162 HOH HOH . L 6 HOH A 81 381 166 HOH HOH . L 6 HOH A 82 382 170 HOH HOH . L 6 HOH A 83 383 171 HOH HOH . L 6 HOH A 84 384 173 HOH HOH . L 6 HOH A 85 385 174 HOH HOH . L 6 HOH A 86 386 177 HOH HOH . L 6 HOH A 87 387 178 HOH HOH . L 6 HOH A 88 388 179 HOH HOH . L 6 HOH A 89 389 181 HOH HOH . L 6 HOH A 90 390 182 HOH HOH . L 6 HOH A 91 391 185 HOH HOH . L 6 HOH A 92 392 190 HOH HOH . L 6 HOH A 93 393 192 HOH HOH . L 6 HOH A 94 394 194 HOH HOH . L 6 HOH A 95 395 195 HOH HOH . L 6 HOH A 96 396 196 HOH HOH . L 6 HOH A 97 397 206 HOH HOH . L 6 HOH A 98 398 207 HOH HOH . L 6 HOH A 99 399 211 HOH HOH . L 6 HOH A 100 400 212 HOH HOH . L 6 HOH A 101 401 214 HOH HOH . L 6 HOH A 102 402 217 HOH HOH . L 6 HOH A 103 403 219 HOH HOH . L 6 HOH A 104 404 224 HOH HOH . L 6 HOH A 105 405 225 HOH HOH . L 6 HOH A 106 406 227 HOH HOH . L 6 HOH A 107 407 228 HOH HOH . L 6 HOH A 108 408 230 HOH HOH . L 6 HOH A 109 409 231 HOH HOH . L 6 HOH A 110 410 232 HOH HOH . L 6 HOH A 111 411 233 HOH HOH . L 6 HOH A 112 412 235 HOH HOH . L 6 HOH A 113 413 236 HOH HOH . L 6 HOH A 114 414 237 HOH HOH . L 6 HOH A 115 415 239 HOH HOH . L 6 HOH A 116 416 240 HOH HOH . L 6 HOH A 117 417 241 HOH HOH . L 6 HOH A 118 418 243 HOH HOH . L 6 HOH A 119 419 244 HOH HOH . L 6 HOH A 120 420 245 HOH HOH . L 6 HOH A 121 421 248 HOH HOH . L 6 HOH A 122 422 249 HOH HOH . L 6 HOH A 123 423 250 HOH HOH . L 6 HOH A 124 424 251 HOH HOH . L 6 HOH A 125 425 252 HOH HOH . L 6 HOH A 126 426 253 HOH HOH . L 6 HOH A 127 427 254 HOH HOH . L 6 HOH A 128 428 255 HOH HOH . L 6 HOH A 129 429 258 HOH HOH . L 6 HOH A 130 430 259 HOH HOH . L 6 HOH A 131 431 264 HOH HOH . L 6 HOH A 132 432 265 HOH HOH . L 6 HOH A 133 433 268 HOH HOH . L 6 HOH A 134 434 269 HOH HOH . L 6 HOH A 135 435 270 HOH HOH . L 6 HOH A 136 436 271 HOH HOH . L 6 HOH A 137 437 273 HOH HOH . L 6 HOH A 138 438 274 HOH HOH . L 6 HOH A 139 439 277 HOH HOH . L 6 HOH A 140 440 278 HOH HOH . L 6 HOH A 141 441 279 HOH HOH . L 6 HOH A 142 442 280 HOH HOH . L 6 HOH A 143 443 281 HOH HOH . L 6 HOH A 144 444 286 HOH HOH . L 6 HOH A 145 445 288 HOH HOH . L 6 HOH A 146 446 289 HOH HOH . L 6 HOH A 147 447 290 HOH HOH . L 6 HOH A 148 448 291 HOH HOH . L 6 HOH A 149 449 292 HOH HOH . L 6 HOH A 150 450 294 HOH HOH . L 6 HOH A 151 451 296 HOH HOH . L 6 HOH A 152 452 297 HOH HOH . L 6 HOH A 153 453 299 HOH HOH . L 6 HOH A 154 454 300 HOH HOH . L 6 HOH A 155 455 301 HOH HOH . L 6 HOH A 156 456 303 HOH HOH . L 6 HOH A 157 457 304 HOH HOH . L 6 HOH A 158 458 305 HOH HOH . L 6 HOH A 159 459 306 HOH HOH . L 6 HOH A 160 460 308 HOH HOH . L 6 HOH A 161 461 309 HOH HOH . L 6 HOH A 162 462 310 HOH HOH . L 6 HOH A 163 463 313 HOH HOH . L 6 HOH A 164 464 317 HOH HOH . L 6 HOH A 165 465 318 HOH HOH . L 6 HOH A 166 466 320 HOH HOH . L 6 HOH A 167 467 322 HOH HOH . L 6 HOH A 168 468 323 HOH HOH . L 6 HOH A 169 469 332 HOH HOH . L 6 HOH A 170 470 333 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -7.242 _atom_site.Cartn_y 12.429 _atom_site.Cartn_z -16.592 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #