data_4HWE # _model_server_result.job_id 8GDft35Ab9rP27FA4pGEGg _model_server_result.datetime_utc '2024-10-19 10:31:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hwe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":305}' # _entry.id 4HWE # _exptl.entry_id 4HWE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4HWE _cell.length_a 121.364 _cell.length_b 121.364 _cell.length_c 152.107 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HWE _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 H CYS 23 1_555 A SG CYS 97 H CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 146 H CYS 146 1_555 A SG CYS 202 H CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 B SG CYS 131 L CYS 131 1_555 B SG CYS 191 L CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 4HWE _atom_sites.fract_transf_matrix[1][1] 0.00824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006574 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 H 1 301 1 SO4 SO4 . D 3 SO4 H 1 302 2 SO4 SO4 . E 3 SO4 H 1 303 3 SO4 SO4 . F 4 GOL H 1 304 5 GOL GOL . G 4 GOL H 1 305 7 GOL GOL . H 4 GOL H 1 306 8 GOL GOL . I 4 GOL H 1 307 11 GOL GOL . J 4 GOL H 1 308 13 GOL GOL . K 4 GOL H 1 309 14 GOL GOL . L 3 SO4 L 1 301 4 SO4 SO4 . M 4 GOL L 1 302 6 GOL GOL . N 4 GOL L 1 303 9 GOL GOL . O 4 GOL L 1 304 10 GOL GOL . P 4 GOL L 1 305 12 GOL GOL . Q 5 HOH H 1 401 2 HOH HOH . Q 5 HOH H 2 402 5 HOH HOH . Q 5 HOH H 3 403 6 HOH HOH . Q 5 HOH H 4 404 7 HOH HOH . Q 5 HOH H 5 405 10 HOH HOH . Q 5 HOH H 6 406 11 HOH HOH . Q 5 HOH H 7 407 13 HOH HOH . Q 5 HOH H 8 408 16 HOH HOH . Q 5 HOH H 9 409 17 HOH HOH . Q 5 HOH H 10 410 18 HOH HOH . Q 5 HOH H 11 411 19 HOH HOH . Q 5 HOH H 12 412 20 HOH HOH . Q 5 HOH H 13 413 21 HOH HOH . Q 5 HOH H 14 414 23 HOH HOH . Q 5 HOH H 15 415 24 HOH HOH . Q 5 HOH H 16 416 25 HOH HOH . Q 5 HOH H 17 417 26 HOH HOH . Q 5 HOH H 18 418 27 HOH HOH . Q 5 HOH H 19 419 28 HOH HOH . Q 5 HOH H 20 420 32 HOH HOH . Q 5 HOH H 21 421 34 HOH HOH . Q 5 HOH H 22 422 35 HOH HOH . Q 5 HOH H 23 423 37 HOH HOH . Q 5 HOH H 24 424 40 HOH HOH . Q 5 HOH H 25 425 42 HOH HOH . Q 5 HOH H 26 426 45 HOH HOH . Q 5 HOH H 27 427 50 HOH HOH . Q 5 HOH H 28 428 51 HOH HOH . Q 5 HOH H 29 429 52 HOH HOH . Q 5 HOH H 30 430 53 HOH HOH . Q 5 HOH H 31 431 54 HOH HOH . Q 5 HOH H 32 432 55 HOH HOH . Q 5 HOH H 33 433 56 HOH HOH . Q 5 HOH H 34 434 57 HOH HOH . Q 5 HOH H 35 435 58 HOH HOH . Q 5 HOH H 36 436 62 HOH HOH . Q 5 HOH H 37 437 63 HOH HOH . Q 5 HOH H 38 438 65 HOH HOH . Q 5 HOH H 39 439 66 HOH HOH . Q 5 HOH H 40 440 68 HOH HOH . Q 5 HOH H 41 441 69 HOH HOH . Q 5 HOH H 42 442 70 HOH HOH . Q 5 HOH H 43 443 71 HOH HOH . Q 5 HOH H 44 444 72 HOH HOH . Q 5 HOH H 45 445 73 HOH HOH . Q 5 HOH H 46 446 75 HOH HOH . Q 5 HOH H 47 447 76 HOH HOH . Q 5 HOH H 48 448 77 HOH HOH . Q 5 HOH H 49 449 78 HOH HOH . Q 5 HOH H 50 450 80 HOH HOH . Q 5 HOH H 51 451 82 HOH HOH . Q 5 HOH H 52 452 83 HOH HOH . Q 5 HOH H 53 453 85 HOH HOH . Q 5 HOH H 54 454 86 HOH HOH . Q 5 HOH H 55 455 87 HOH HOH . Q 5 HOH H 56 456 89 HOH HOH . Q 5 HOH H 57 457 90 HOH HOH . Q 5 HOH H 58 458 91 HOH HOH . Q 5 HOH H 59 459 94 HOH HOH . Q 5 HOH H 60 460 95 HOH HOH . Q 5 HOH H 61 461 98 HOH HOH . Q 5 HOH H 62 462 100 HOH HOH . Q 5 HOH H 63 463 101 HOH HOH . Q 5 HOH H 64 464 102 HOH HOH . Q 5 HOH H 65 465 103 HOH HOH . Q 5 HOH H 66 466 104 HOH HOH . Q 5 HOH H 67 467 106 HOH HOH . Q 5 HOH H 68 468 108 HOH HOH . Q 5 HOH H 69 469 109 HOH HOH . Q 5 HOH H 70 470 114 HOH HOH . Q 5 HOH H 71 471 116 HOH HOH . Q 5 HOH H 72 472 119 HOH HOH . Q 5 HOH H 73 473 121 HOH HOH . Q 5 HOH H 74 474 125 HOH HOH . Q 5 HOH H 75 475 126 HOH HOH . Q 5 HOH H 76 476 127 HOH HOH . Q 5 HOH H 77 477 129 HOH HOH . Q 5 HOH H 78 478 130 HOH HOH . Q 5 HOH H 79 479 131 HOH HOH . Q 5 HOH H 80 480 134 HOH HOH . Q 5 HOH H 81 481 135 HOH HOH . Q 5 HOH H 82 482 136 HOH HOH . Q 5 HOH H 83 483 137 HOH HOH . Q 5 HOH H 84 484 138 HOH HOH . Q 5 HOH H 85 485 139 HOH HOH . Q 5 HOH H 86 486 140 HOH HOH . Q 5 HOH H 87 487 143 HOH HOH . Q 5 HOH H 88 488 144 HOH HOH . Q 5 HOH H 89 489 145 HOH HOH . Q 5 HOH H 90 490 151 HOH HOH . Q 5 HOH H 91 491 153 HOH HOH . Q 5 HOH H 92 492 155 HOH HOH . Q 5 HOH H 93 493 156 HOH HOH . Q 5 HOH H 94 494 157 HOH HOH . Q 5 HOH H 95 495 160 HOH HOH . Q 5 HOH H 96 496 161 HOH HOH . Q 5 HOH H 97 497 164 HOH HOH . Q 5 HOH H 98 498 166 HOH HOH . Q 5 HOH H 99 499 167 HOH HOH . Q 5 HOH H 100 500 169 HOH HOH . Q 5 HOH H 101 501 170 HOH HOH . Q 5 HOH H 102 502 174 HOH HOH . Q 5 HOH H 103 503 175 HOH HOH . Q 5 HOH H 104 504 179 HOH HOH . Q 5 HOH H 105 505 180 HOH HOH . Q 5 HOH H 106 506 181 HOH HOH . Q 5 HOH H 107 507 182 HOH HOH . Q 5 HOH H 108 508 183 HOH HOH . Q 5 HOH H 109 509 185 HOH HOH . Q 5 HOH H 110 510 187 HOH HOH . Q 5 HOH H 111 511 188 HOH HOH . Q 5 HOH H 112 512 189 HOH HOH . Q 5 HOH H 113 513 190 HOH HOH . Q 5 HOH H 114 514 194 HOH HOH . Q 5 HOH H 115 515 196 HOH HOH . Q 5 HOH H 116 516 199 HOH HOH . Q 5 HOH H 117 517 201 HOH HOH . Q 5 HOH H 118 518 203 HOH HOH . Q 5 HOH H 119 519 204 HOH HOH . Q 5 HOH H 120 520 208 HOH HOH . Q 5 HOH H 121 521 213 HOH HOH . Q 5 HOH H 122 522 214 HOH HOH . Q 5 HOH H 123 523 215 HOH HOH . Q 5 HOH H 124 524 216 HOH HOH . Q 5 HOH H 125 525 217 HOH HOH . Q 5 HOH H 126 526 218 HOH HOH . Q 5 HOH H 127 527 219 HOH HOH . Q 5 HOH H 128 528 220 HOH HOH . Q 5 HOH H 129 529 221 HOH HOH . Q 5 HOH H 130 530 222 HOH HOH . Q 5 HOH H 131 531 223 HOH HOH . Q 5 HOH H 132 532 226 HOH HOH . Q 5 HOH H 133 533 227 HOH HOH . Q 5 HOH H 134 534 228 HOH HOH . Q 5 HOH H 135 535 229 HOH HOH . Q 5 HOH H 136 536 231 HOH HOH . Q 5 HOH H 137 537 233 HOH HOH . Q 5 HOH H 138 538 236 HOH HOH . Q 5 HOH H 139 539 237 HOH HOH . Q 5 HOH H 140 540 240 HOH HOH . Q 5 HOH H 141 541 241 HOH HOH . Q 5 HOH H 142 542 242 HOH HOH . Q 5 HOH H 143 543 243 HOH HOH . R 5 HOH L 1 401 1 HOH HOH . R 5 HOH L 2 402 3 HOH HOH . R 5 HOH L 3 403 4 HOH HOH . R 5 HOH L 4 404 8 HOH HOH . R 5 HOH L 5 405 9 HOH HOH . R 5 HOH L 6 406 12 HOH HOH . R 5 HOH L 7 407 14 HOH HOH . R 5 HOH L 8 408 15 HOH HOH . R 5 HOH L 9 409 22 HOH HOH . R 5 HOH L 10 410 29 HOH HOH . R 5 HOH L 11 411 30 HOH HOH . R 5 HOH L 12 412 31 HOH HOH . R 5 HOH L 13 413 33 HOH HOH . R 5 HOH L 14 414 36 HOH HOH . R 5 HOH L 15 415 38 HOH HOH . R 5 HOH L 16 416 39 HOH HOH . R 5 HOH L 17 417 41 HOH HOH . R 5 HOH L 18 418 43 HOH HOH . R 5 HOH L 19 419 44 HOH HOH . R 5 HOH L 20 420 46 HOH HOH . R 5 HOH L 21 421 47 HOH HOH . R 5 HOH L 22 422 48 HOH HOH . R 5 HOH L 23 423 49 HOH HOH . R 5 HOH L 24 424 59 HOH HOH . R 5 HOH L 25 425 60 HOH HOH . R 5 HOH L 26 426 61 HOH HOH . R 5 HOH L 27 427 64 HOH HOH . R 5 HOH L 28 428 67 HOH HOH . R 5 HOH L 29 429 74 HOH HOH . R 5 HOH L 30 430 79 HOH HOH . R 5 HOH L 31 431 81 HOH HOH . R 5 HOH L 32 432 84 HOH HOH . R 5 HOH L 33 433 88 HOH HOH . R 5 HOH L 34 434 92 HOH HOH . R 5 HOH L 35 435 93 HOH HOH . R 5 HOH L 36 436 96 HOH HOH . R 5 HOH L 37 437 97 HOH HOH . R 5 HOH L 38 438 99 HOH HOH . R 5 HOH L 39 439 105 HOH HOH . R 5 HOH L 40 440 107 HOH HOH . R 5 HOH L 41 441 110 HOH HOH . R 5 HOH L 42 442 111 HOH HOH . R 5 HOH L 43 443 112 HOH HOH . R 5 HOH L 44 444 113 HOH HOH . R 5 HOH L 45 445 115 HOH HOH . R 5 HOH L 46 446 117 HOH HOH . R 5 HOH L 47 447 118 HOH HOH . R 5 HOH L 48 448 120 HOH HOH . R 5 HOH L 49 449 122 HOH HOH . R 5 HOH L 50 450 123 HOH HOH . R 5 HOH L 51 451 124 HOH HOH . R 5 HOH L 52 452 128 HOH HOH . R 5 HOH L 53 453 132 HOH HOH . R 5 HOH L 54 454 133 HOH HOH . R 5 HOH L 55 455 141 HOH HOH . R 5 HOH L 56 456 142 HOH HOH . R 5 HOH L 57 457 146 HOH HOH . R 5 HOH L 58 458 147 HOH HOH . R 5 HOH L 59 459 148 HOH HOH . R 5 HOH L 60 460 149 HOH HOH . R 5 HOH L 61 461 150 HOH HOH . R 5 HOH L 62 462 152 HOH HOH . R 5 HOH L 63 463 154 HOH HOH . R 5 HOH L 64 464 158 HOH HOH . R 5 HOH L 65 465 159 HOH HOH . R 5 HOH L 66 466 162 HOH HOH . R 5 HOH L 67 467 163 HOH HOH . R 5 HOH L 68 468 165 HOH HOH . R 5 HOH L 69 469 168 HOH HOH . R 5 HOH L 70 470 171 HOH HOH . R 5 HOH L 71 471 172 HOH HOH . R 5 HOH L 72 472 173 HOH HOH . R 5 HOH L 73 473 176 HOH HOH . R 5 HOH L 74 474 177 HOH HOH . R 5 HOH L 75 475 178 HOH HOH . R 5 HOH L 76 476 184 HOH HOH . R 5 HOH L 77 477 186 HOH HOH . R 5 HOH L 78 478 191 HOH HOH . R 5 HOH L 79 479 192 HOH HOH . R 5 HOH L 80 480 193 HOH HOH . R 5 HOH L 81 481 195 HOH HOH . R 5 HOH L 82 482 197 HOH HOH . R 5 HOH L 83 483 198 HOH HOH . R 5 HOH L 84 484 200 HOH HOH . R 5 HOH L 85 485 202 HOH HOH . R 5 HOH L 86 486 205 HOH HOH . R 5 HOH L 87 487 206 HOH HOH . R 5 HOH L 88 488 207 HOH HOH . R 5 HOH L 89 489 209 HOH HOH . R 5 HOH L 90 490 210 HOH HOH . R 5 HOH L 91 491 211 HOH HOH . R 5 HOH L 92 492 212 HOH HOH . R 5 HOH L 93 493 224 HOH HOH . R 5 HOH L 94 494 225 HOH HOH . R 5 HOH L 95 495 230 HOH HOH . R 5 HOH L 96 496 232 HOH HOH . R 5 HOH L 97 497 234 HOH HOH . R 5 HOH L 98 498 235 HOH HOH . R 5 HOH L 99 499 238 HOH HOH . R 5 HOH L 100 500 239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . P 4 19.184 51.998 19.667 1 53.66 ? C1 GOL 305 L 1 HETATM 2 O O1 GOL . . . P 4 20.03 52.478 18.622 1 50.41 ? O1 GOL 305 L 1 HETATM 3 C C2 GOL . . . P 4 19.937 51.284 20.768 1 51.88 ? C2 GOL 305 L 1 HETATM 4 O O2 GOL . . . P 4 19.075 51.059 21.9 1 47.51 ? O2 GOL 305 L 1 HETATM 5 C C3 GOL . . . P 4 21.124 52.114 21.189 1 53.52 ? C3 GOL 305 L 1 HETATM 6 O O3 GOL . . . P 4 22.146 51.267 21.662 1 55.2 ? O3 GOL 305 L 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #