data_4HYJ # _model_server_result.job_id oTpn_ePOw1fn2rR42BnZMg _model_server_result.datetime_utc '2024-11-23 08:40:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hyj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":313}' # _entry.id 4HYJ # _exptl.entry_id 4HYJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 30 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HYJ _cell.length_a 96.099 _cell.length_b 96.099 _cell.length_c 124.38 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HYJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,IA 1 1 B,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,JA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 225 A LYS 225 1_555 C C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 B NZ LYS 225 B LYS 225 1_555 P C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 194 n n C1 H11 LFA sing 195 n n C1 H12 LFA sing 196 n n C1 H13 LFA sing 197 n n C2 C3 LFA sing 198 n n C2 H21 LFA sing 199 n n C2 H22 LFA sing 200 n n C3 C4 LFA sing 201 n n C3 H31 LFA sing 202 n n C3 H32 LFA sing 203 n n C4 C5 LFA sing 204 n n C4 H41 LFA sing 205 n n C4 H42 LFA sing 206 n n C5 C6 LFA sing 207 n n C5 H51 LFA sing 208 n n C5 H52 LFA sing 209 n n C6 C7 LFA sing 210 n n C6 H61 LFA sing 211 n n C6 H62 LFA sing 212 n n C7 C8 LFA sing 213 n n C7 H71 LFA sing 214 n n C7 H72 LFA sing 215 n n C8 C9 LFA sing 216 n n C8 H81 LFA sing 217 n n C8 H82 LFA sing 218 n n C9 C10 LFA sing 219 n n C9 H91 LFA sing 220 n n C9 H92 LFA sing 221 n n C10 C11 LFA sing 222 n n C10 H101 LFA sing 223 n n C10 H102 LFA sing 224 n n C11 C12 LFA sing 225 n n C11 H111 LFA sing 226 n n C11 H112 LFA sing 227 n n C12 C13 LFA sing 228 n n C12 H121 LFA sing 229 n n C12 H122 LFA sing 230 n n C13 C14 LFA sing 231 n n C13 H131 LFA sing 232 n n C13 H132 LFA sing 233 n n C14 C15 LFA sing 234 n n C14 H141 LFA sing 235 n n C14 H142 LFA sing 236 n n C15 C16 LFA sing 237 n n C15 H151 LFA sing 238 n n C15 H152 LFA sing 239 n n C16 C17 LFA sing 240 n n C16 H161 LFA sing 241 n n C16 H162 LFA sing 242 n n C17 C18 LFA sing 243 n n C17 H171 LFA sing 244 n n C17 H172 LFA sing 245 n n C18 C19 LFA sing 246 n n C18 H181 LFA sing 247 n n C18 H182 LFA sing 248 n n C19 C20 LFA sing 249 n n C19 H191 LFA sing 250 n n C19 H192 LFA sing 251 n n C20 H201 LFA sing 252 n n C20 H202 LFA sing 253 n n C20 H203 LFA sing 254 n n # _atom_sites.entry_id 4HYJ _atom_sites.fract_transf_matrix[1][1] 0.010406 _atom_sites.fract_transf_matrix[1][2] 0.006008 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RET A 1 301 1225 RET RET . D 3 LFA A 1 302 2 LFA LFA . E 3 LFA A 1 303 9 LFA LFA . F 3 LFA A 1 304 22 LFA LFA . G 3 LFA A 1 305 23 LFA LFA . H 3 LFA A 1 306 24 LFA LFA . I 3 LFA A 1 307 25 LFA LFA . J 3 LFA A 1 308 26 LFA LFA . K 3 LFA A 1 309 30 LFA LFA . L 3 LFA A 1 310 32 LFA LFA . M 3 LFA A 1 311 35 LFA LFA . N 3 LFA A 1 312 38 LFA LFA . O 3 LFA A 1 313 40 LFA LFA . P 2 RET B 1 301 1225 RET RET . Q 3 LFA B 1 302 3 LFA LFA . R 3 LFA B 1 303 11 LFA LFA . S 3 LFA B 1 304 12 LFA LFA . T 3 LFA B 1 305 13 LFA LFA . U 3 LFA B 1 306 17 LFA LFA . V 3 LFA B 1 307 18 LFA LFA . W 3 LFA B 1 308 19 LFA LFA . X 3 LFA B 1 309 20 LFA LFA . Y 3 LFA B 1 310 21 LFA LFA . Z 3 LFA B 1 311 27 LFA LFA . AA 3 LFA B 1 312 28 LFA LFA . BA 3 LFA B 1 313 29 LFA LFA . CA 3 LFA B 1 314 31 LFA LFA . DA 3 LFA B 1 315 33 LFA LFA . EA 3 LFA B 1 316 34 LFA LFA . FA 3 LFA B 1 317 36 LFA LFA . GA 3 LFA B 1 318 37 LFA LFA . HA 3 LFA B 1 319 39 LFA LFA . IA 4 HOH A 1 402 402 HOH HOH . IA 4 HOH A 2 403 403 HOH HOH . IA 4 HOH A 3 404 404 HOH HOH . IA 4 HOH A 4 405 405 HOH HOH . IA 4 HOH A 5 406 406 HOH HOH . IA 4 HOH A 6 407 407 HOH HOH . IA 4 HOH A 7 501 501 HOH HOH . IA 4 HOH A 8 502 502 HOH HOH . IA 4 HOH A 9 503 503 HOH HOH . IA 4 HOH A 10 511 511 HOH HOH . IA 4 HOH A 11 512 512 HOH HOH . IA 4 HOH A 12 513 513 HOH HOH . JA 4 HOH B 1 402 402 HOH HOH . JA 4 HOH B 2 403 403 HOH HOH . JA 4 HOH B 3 406 406 HOH HOH . JA 4 HOH B 4 407 407 HOH HOH . JA 4 HOH B 5 501 501 HOH HOH . JA 4 HOH B 6 511 511 HOH HOH . JA 4 HOH B 7 512 512 HOH HOH . JA 4 HOH B 8 513 513 HOH HOH . JA 4 HOH B 9 514 514 HOH HOH . JA 4 HOH B 10 515 515 HOH HOH . JA 4 HOH B 11 516 516 HOH HOH . JA 4 HOH B 12 517 517 HOH HOH . JA 4 HOH B 13 518 518 HOH HOH . JA 4 HOH B 14 519 519 HOH HOH . JA 4 HOH B 15 520 520 HOH HOH . JA 4 HOH B 16 521 521 HOH HOH . JA 4 HOH B 17 522 522 HOH HOH . JA 4 HOH B 18 523 523 HOH HOH . JA 4 HOH B 19 524 524 HOH HOH . JA 4 HOH B 20 525 525 HOH HOH . JA 4 HOH B 21 526 526 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . O 3 -8.815 -24.365 -29.564 1 62.27 ? C1 LFA 313 A 1 HETATM 2 C C2 LFA . . . O 3 -8.185 -23.063 -30.016 1 70.87 ? C2 LFA 313 A 1 HETATM 3 C C3 LFA . . . O 3 -8.59 -22.651 -31.433 1 72.22 ? C3 LFA 313 A 1 HETATM 4 C C4 LFA . . . O 3 -9.757 -21.662 -31.431 1 74.37 ? C4 LFA 313 A 1 HETATM 5 C C5 LFA . . . O 3 -10.015 -21.074 -32.819 1 73.32 ? C5 LFA 313 A 1 HETATM 6 C C6 LFA . . . O 3 -11.388 -20.414 -32.92 1 69.44 ? C6 LFA 313 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #